RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772		A0A096LPF7	62 aa		3.04	□□□□□ -1.92
MSI2-216	ENST00000582772	TRAV8-2	A0A0B4J237	113 aa		3.04	□□□□□ -1.92
MSI2-216	ENST00000582772	IGHV3-66	A0A0C4DH42	116 aa		3.04	□□□□□ -1.92
MSI2-216	ENST00000582772	MUC21	A0A0G2JKD1	596 aa		3.04	□□□□□ -1.92
MSI2-216	ENST00000582772	MUC21	A0A140T8X8	626 aa		3.04	□□□□□ -1.92
MSI2-216	ENST00000582772		A0A1B0GUT8	65 aa		3.04	□□□□□ -1.92
MSI2-216	ENST00000582772	hDV102S1	A0JD36	115 aa		3.04	□□□□□ -1.92
MSI2-216	ENST00000582772	SMKR1	H3BMG3	65 aa		3.04	□□□□□ -1.92
MSI2-216	ENST00000582772	SYS1-DBNDD2	H3BUS1	97 aa		3.04	□□□□□ -1.92
MSI2-216	ENST00000582772	NCR2	O95944	276 aa		3.04	□□□□□ -1.92
MSI2-216	ENST00000582772	LINC00614	P0C842	121 aa		3.04	□□□□□ -1.92
MSI2-216	ENST00000582772	IGLC6	P0CF74	106 aa		3.04	□□□□□ -1.92
MSI2-216	ENST00000582772	ZNF25	P17030	456 aa	Predicted RBP	3.04	□□□□□ -1.92
MSI2-216	ENST00000582772	GPR183	P32249	361 aa		3.04	□□□□□ -1.92
MSI2-216	ENST00000582772	SRSF9	Q13242	221 aa	Known RBP eCLIP	3.04	□□□□□ -1.92	4e-6	■■□□□ 12.1
MSI2-216	ENST00000582772	RIG	Q13278	110 aa		3.04	□□□□□ -1.92
MSI2-216	ENST00000582772	PDE6H	Q13956	83 aa		3.04	□□□□□ -1.92
MSI2-216	ENST00000582772	BATF	Q16520	125 aa		3.04	□□□□□ -1.92
MSI2-216	ENST00000582772	MUC21	Q5SSG8	566 aa		3.04	□□□□□ -1.92
MSI2-216	ENST00000582772	LYZL1	Q6UWQ5	148 aa		3.04	□□□□□ -1.92
MSI2-216	ENST00000582772		Q6ZN92	141 aa		3.04	□□□□□ -1.92
MSI2-216	ENST00000582772	ZNF493	Q6ZR52	646 aa		3.04	□□□□□ -1.92
MSI2-216	ENST00000582772	BORCS7	Q96B45	105 aa		3.04	□□□□□ -1.92
MSI2-216	ENST00000582772	CHCHD1	Q96BP2	118 aa	Known RBP	3.04	□□□□□ -1.92
MSI2-216	ENST00000582772	TXN2	Q99757	166 aa		3.04	□□□□□ -1.92
MSI2-216	ENST00000582772	C11orf21	Q9P2W6	132 aa		3.04	□□□□□ -1.92
MSI2-216	ENST00000582772	UQCR10	Q9UDW1	63 aa		3.04	□□□□□ -1.92
MSI2-216	ENST00000582772	SMPX	Q9UHP9	88 aa		3.04	□□□□□ -1.92
MSI2-216	ENST00000582772	RABAC1	Q9UI14	185 aa		3.04	□□□□□ -1.92
MSI2-216	ENST00000582772	RNF24	Q9Y225	148 aa		3.04	□□□□□ -1.92
MSI2-216	ENST00000582772		U3KQE9	123 aa		3.04	□□□□□ -1.92
MSI2-216	ENST00000582772	IGHV3OR16-13	A0A075B7E8	117 aa		3.03	□□□□□ -1.92
MSI2-216	ENST00000582772	IGHV3-49	A0A0A0MS15	119 aa		3.03	□□□□□ -1.92
MSI2-216	ENST00000582772	TRBV7-1	A0A0A6YYK4	115 aa		3.03	□□□□□ -1.92
MSI2-216	ENST00000582772	IGHV3-74	A0A0B4J1X5	117 aa		3.03	□□□□□ -1.92
MSI2-216	ENST00000582772	CRX	O43186	299 aa	Predicted RBP	3.03	□□□□□ -1.92
MSI2-216	ENST00000582772	DLEU1	O43261	78 aa		3.03	□□□□□ -1.92
MSI2-216	ENST00000582772	ZNF207	O43670	478 aa	Known RBP	3.03	□□□□□ -1.92
MSI2-216	ENST00000582772	CLEC3B	P05452	202 aa		3.03	□□□□□ -1.92
MSI2-216	ENST00000582772	NPS	P0C0P6	89 aa		3.03	□□□□□ -1.92
MSI2-216	ENST00000582772	DEFB130B	P0DP73	79 aa		3.03	□□□□□ -1.92
MSI2-216	ENST00000582772	DEFB130A	P0DP74	79 aa		3.03	□□□□□ -1.92
MSI2-216	ENST00000582772	RPL7	P18124	248 aa	Known RBP	3.03	□□□□□ -1.92
MSI2-216	ENST00000582772	TSPO	P30536	169 aa		3.03	□□□□□ -1.92
MSI2-216	ENST00000582772	IFI27	P40305	119 aa	Predicted RBP	3.03	□□□□□ -1.92
MSI2-216	ENST00000582772	HINT1	P49773	126 aa	Predicted RBP	3.03	□□□□□ -1.92
MSI2-216	ENST00000582772	PSG9	Q00887	426 aa		3.03	□□□□□ -1.92
MSI2-216	ENST00000582772	REL	Q04864	619 aa	Predicted RBP	3.03	□□□□□ -1.92
MSI2-216	ENST00000582772	CIRBP	Q14011	172 aa	Known RBP	3.03	□□□□□ -1.92
MSI2-216	ENST00000582772	RRN3P1	Q2M238	152 aa		3.03	□□□□□ -1.92
MSI2-216	ENST00000582772	MRPL51	Q4U2R6	128 aa	Known RBP	3.03	□□□□□ -1.92
MSI2-216	ENST00000582772	FAM104B	Q5XKR9	115 aa		3.03	□□□□□ -1.92
MSI2-216	ENST00000582772		Q6ZQT7	251 aa		3.03	□□□□□ -1.92
MSI2-216	ENST00000582772		Q6ZVH6	145 aa		3.03	□□□□□ -1.92
MSI2-216	ENST00000582772	AMN1	Q8IY45	258 aa		3.03	□□□□□ -1.92
MSI2-216	ENST00000582772	RNF182	Q8N6D2	247 aa		3.03	□□□□□ -1.92
MSI2-216	ENST00000582772	ARL6IP6	Q8N6S5	226 aa		3.03	□□□□□ -1.92
MSI2-216	ENST00000582772	RNF185	Q96GF1	192 aa		3.03	□□□□□ -1.92
MSI2-216	ENST00000582772	PMCHL2	Q9BQD1	86 aa		3.03	□□□□□ -1.92
MSI2-216	ENST00000582772	TMEM208	Q9BTX3	173 aa		3.03	□□□□□ -1.92
MSI2-216	ENST00000582772	TPPP3	Q9BW30	176 aa		3.03	□□□□□ -1.92
MSI2-216	ENST00000582772	MS4A6A	Q9H2W1	248 aa		3.03	□□□□□ -1.92
MSI2-216	ENST00000582772	AAMDC	Q9H7C9	122 aa		3.03	□□□□□ -1.92
MSI2-216	ENST00000582772	LAMTOR2	Q9Y2Q5	125 aa		3.03	□□□□□ -1.92
MSI2-216	ENST00000582772	LOC389332	A0A1B0GUA5	103 aa		3.02	□□□□□ -1.93
MSI2-216	ENST00000582772		A0A1B0GW15	77 aa		3.02	□□□□□ -1.93
MSI2-216	ENST00000582772	SERTM2	A0A1B0GWG4	89 aa		3.02	□□□□□ -1.93
MSI2-216	ENST00000582772	C20orf202	A1L168	122 aa		3.02	□□□□□ -1.93
MSI2-216	ENST00000582772	KNCN	A6PVL3	124 aa		3.02	□□□□□ -1.93
MSI2-216	ENST00000582772		D6R8Y8	96 aa		3.02	□□□□□ -1.93
MSI2-216	ENST00000582772		K7EQM0	130 aa		3.02	□□□□□ -1.93
MSI2-216	ENST00000582772	NDUFA4	O00483	81 aa		3.02	□□□□□ -1.93
MSI2-216	ENST00000582772	BUB3	O43684	328 aa		3.02	□□□□□ -1.93
MSI2-216	ENST00000582772	LEPROTL1	O95214	131 aa		3.02	□□□□□ -1.93
MSI2-216	ENST00000582772	NPY	P01303	97 aa		3.02	□□□□□ -1.93
MSI2-216	ENST00000582772	CRYGD	P07320	174 aa		3.02	□□□□□ -1.93
MSI2-216	ENST00000582772	OR5AL1	P0C617	328 aa		3.02	□□□□□ -1.93
MSI2-216	ENST00000582772	GATA1	P15976	413 aa	Predicted RBP	3.02	□□□□□ -1.93
MSI2-216	ENST00000582772	CSN1S1	P47710	185 aa		3.02	□□□□□ -1.93
MSI2-216	ENST00000582772	FXYD7	P58549	80 aa		3.02	□□□□□ -1.93
MSI2-216	ENST00000582772	COL5A1-AS1	Q5SY13	56 aa		3.02	□□□□□ -1.93
MSI2-216	ENST00000582772	PRR9	Q5T870	116 aa		3.02	□□□□□ -1.93
MSI2-216	ENST00000582772	LINC01545	Q5VT33	79 aa		3.02	□□□□□ -1.93
MSI2-216	ENST00000582772		Q6AWC8	147 aa		3.02	□□□□□ -1.93
MSI2-216	ENST00000582772	PET117	Q6UWS5	81 aa		3.02	□□□□□ -1.93
MSI2-216	ENST00000582772	FER1L6-AS1	Q8NA97	138 aa		3.02	□□□□□ -1.93
MSI2-216	ENST00000582772	EEF1AKMT3	Q96AZ1	226 aa		3.02	□□□□□ -1.93
MSI2-216	ENST00000582772	C20orf173	Q96LM9	149 aa		3.02	□□□□□ -1.93
MSI2-216	ENST00000582772	PRELID3A	Q96N28	172 aa		3.02	□□□□□ -1.93
MSI2-216	ENST00000582772	RHPN1-AS1	Q9BWJ2	59 aa		3.02	□□□□□ -1.93
MSI2-216	ENST00000582772	AGPAT4-IT1	Q9H0P7	198 aa		3.02	□□□□□ -1.93
MSI2-216	ENST00000582772	ST20	Q9HBF5	79 aa		3.02	□□□□□ -1.93
MSI2-216	ENST00000582772	IGKV3D-20	A0A0C4DH25	116 aa		3.01	□□□□□ -1.93
MSI2-216	ENST00000582772	IGHV7-4-1	A0A0J9YVY3	117 aa		3.01	□□□□□ -1.93
MSI2-216	ENST00000582772	PLAC8L1	A1L4L8	177 aa		3.01	□□□□□ -1.93
MSI2-216	ENST00000582772	LINC01546	A6NGU7	62 aa		3.01	□□□□□ -1.93
MSI2-216	ENST00000582772	IBA57-AS1	B1ANH7	110 aa		3.01	□□□□□ -1.93
MSI2-216	ENST00000582772		M0R2T5	61 aa		3.01	□□□□□ -1.93
MSI2-216	ENST00000582772	CT45A10	P0DMU9	189 aa		3.01	□□□□□ -1.93
MSI2-216	ENST00000582772	FGF6	P10767	208 aa		3.01	□□□□□ -1.93

Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms