RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 A0A087WTM6 91 aa0□□□□□ -2.41
SMCHD1-207ENST00000581711 TRAV12-3A0A0B4J271 114 aa0□□□□□ -2.41
SMCHD1-207ENST00000581711 OVOS2A0A0J9YW53 1432 aa0□□□□□ -2.41
SMCHD1-207ENST00000581711 MUC22E2RYF6 1773 aaPredicted RBP0□□□□□ -2.41
SMCHD1-207ENST00000581711 LAMB1P07942 1786 aa0□□□□□ -2.41
SMCHD1-207ENST00000581711 HIST1H1AQ02539 215 aaPredicted RBP0□□□□□ -2.41
SMCHD1-207ENST00000581711 LINC01545Q5VT33 79 aa0□□□□□ -2.41
SMCHD1-207ENST00000581711 OVOS2Q6IE36 1432 aa0□□□□□ -2.41
SMCHD1-207ENST00000581711 SLC48A1Q6P1K1 146 aa0□□□□□ -2.41
SMCHD1-207ENST00000581711 AKAP14Q86UN6 197 aa0□□□□□ -2.41
SMCHD1-207ENST00000581711 VSTM2AQ8TAG5 236 aa0□□□□□ -2.41
SMCHD1-207ENST00000581711 ANKRD30AQ9BXX3 1397 aa0□□□□□ -2.41
SMCHD1-207ENST00000581711 SAR1AQ9NR31 198 aa0□□□□□ -2.41
SMCHD1-207ENST00000581711 V9GYV3 84 aa0□□□□□ -2.41
SMCHD1-207ENST00000581711 DMXL2Q8TDJ6 3036 aa-0□□□□□ -2.41
SMCHD1-207ENST00000581711 NBASA2RRP1 2371 aa-0.01□□□□□ -2.41
SMCHD1-207ENST00000581711 MYH9P35579 1960 aaKnown RBP-0.01□□□□□ -2.41
SMCHD1-207ENST00000581711 MYH8P13535 1937 aa-0.01□□□□□ -2.41
SMCHD1-207ENST00000581711 SSC5DA1L4H1 1573 aa-0.01□□□□□ -2.41
SMCHD1-207ENST00000581711 LRP1BQ9NZR2 4599 aa-0.01□□□□□ -2.41
SMCHD1-207ENST00000581711 DISP2A7MBM2 1401 aa-0.01□□□□□ -2.41
SMCHD1-207ENST00000581711 J3QR89 54 aa-0.01□□□□□ -2.41
SMCHD1-207ENST00000581711 IGLC6P0CF74 106 aa-0.01□□□□□ -2.41
SMCHD1-207ENST00000581711 ACYP2P14621 99 aa-0.01□□□□□ -2.41
SMCHD1-207ENST00000581711 CKS1BP61024 79 aa-0.01□□□□□ -2.41
SMCHD1-207ENST00000581711 LELP1Q5T871 98 aa-0.01□□□□□ -2.41
SMCHD1-207ENST00000581711 SPANXN1Q5VSR9 72 aa-0.01□□□□□ -2.41
SMCHD1-207ENST00000581711 MIC13Q5XKP0 118 aa-0.01□□□□□ -2.41
SMCHD1-207ENST00000581711 Q96NJ1 140 aa-0.01□□□□□ -2.41
SMCHD1-207ENST00000581711 GSKIPQ9P0R6 139 aa-0.01□□□□□ -2.41
SMCHD1-207ENST00000581711 NDUFA12Q9UI09 145 aa-0.01□□□□□ -2.41
SMCHD1-207ENST00000581711 SCP2D1Q9UJQ7 156 aa-0.01□□□□□ -2.41
SMCHD1-207ENST00000581711 U3KQA8 63 aa-0.01□□□□□ -2.41
SMCHD1-207ENST00000581711 BRCA2P51587 3418 aa-0.01□□□□□ -2.41
SMCHD1-207ENST00000581711 TACC2O95359 2948 aa-0.01□□□□□ -2.41
SMCHD1-207ENST00000581711 STARD9Q9P2P6 4700 aa-0.01□□□□□ -2.41
SMCHD1-207ENST00000581711 CSPG4Q6UVK1 2322 aa-0.02□□□□□ -2.41
SMCHD1-207ENST00000581711 MYCBP2O75592 4640 aa-0.02□□□□□ -2.41
SMCHD1-207ENST00000581711 MGAQ8IWI9 3026 aa-0.02□□□□□ -2.41
SMCHD1-207ENST00000581711 NF1P21359 2839 aa-0.02□□□□□ -2.41
SMCHD1-207ENST00000581711 FAM236AA0A1B0GUQ0 79 aa-0.02□□□□□ -2.41
SMCHD1-207ENST00000581711 FAM236BA0A1B0GV22 79 aa-0.02□□□□□ -2.41
SMCHD1-207ENST00000581711 A6NIN4 97 aa-0.02□□□□□ -2.41
SMCHD1-207ENST00000581711 TMEM14DPA8MWL7 114 aa-0.02□□□□□ -2.41
SMCHD1-207ENST00000581711 M0R129 80 aa-0.02□□□□□ -2.41
SMCHD1-207ENST00000581711 M0R2Z0 102 aa-0.02□□□□□ -2.41
SMCHD1-207ENST00000581711 NCR2O95944 276 aa-0.02□□□□□ -2.41
SMCHD1-207ENST00000581711 PIRTP0C851 137 aa-0.02□□□□□ -2.41
SMCHD1-207ENST00000581711 GCHFRP30047 84 aa-0.02□□□□□ -2.41
SMCHD1-207ENST00000581711 RPL7L1Q6DKI1 246 aaKnown RBP-0.02□□□□□ -2.41
SMCHD1-207ENST00000581711 Q6ZRX8 168 aa-0.02□□□□□ -2.41
SMCHD1-207ENST00000581711 CTAGE3PQ8IX95 158 aa-0.02□□□□□ -2.41
SMCHD1-207ENST00000581711 LZICQ8WZA0 190 aa-0.02□□□□□ -2.41
SMCHD1-207ENST00000581711 PSMG3Q9BT73 122 aaPredicted RBP-0.02□□□□□ -2.41
SMCHD1-207ENST00000581711 SMIM3Q9BZL3 60 aa-0.02□□□□□ -2.41
SMCHD1-207ENST00000581711 BATF3Q9NR55 127 aa-0.02□□□□□ -2.41
SMCHD1-207ENST00000581711 RPRMQ9NS64 109 aa-0.02□□□□□ -2.41
SMCHD1-207ENST00000581711 SIPA1L3O60292 1781 aaPredicted RBP-0.02□□□□□ -2.41
SMCHD1-207ENST00000581711 UNC13AQ9UPW8 1703 aa-0.02□□□□□ -2.41
SMCHD1-207ENST00000581711 WNK2Q9Y3S1 2297 aa-0.02□□□□□ -2.41
SMCHD1-207ENST00000581711 ASPMQ8IZT6 3477 aa-0.03□□□□□ -2.41
SMCHD1-207ENST00000581711 ARHGEF10O15013 1369 aa-0.03□□□□□ -2.41
SMCHD1-207ENST00000581711 SPEF2Q9C093 1822 aa-0.03□□□□□ -2.41
SMCHD1-207ENST00000581711 TRGV1A0A0A0MS02 117 aa-0.03□□□□□ -2.41
SMCHD1-207ENST00000581711 K7ERU9 68 aa-0.03□□□□□ -2.41
SMCHD1-207ENST00000581711 ARPC5O15511 151 aa-0.03□□□□□ -2.41
SMCHD1-207ENST00000581711 IFNA17P01571 189 aa-0.03□□□□□ -2.41
SMCHD1-207ENST00000581711 TSPAN19P0C672 248 aa-0.03□□□□□ -2.41
SMCHD1-207ENST00000581711 LINC00694P0DN24 101 aa-0.03□□□□□ -2.41
SMCHD1-207ENST00000581711 IFITM1P13164 125 aa-0.03□□□□□ -2.41
SMCHD1-207ENST00000581711 SPRR2DP22532 72 aa-0.03□□□□□ -2.41
SMCHD1-207ENST00000581711 EDDM3BP56851 147 aa-0.03□□□□□ -2.41
SMCHD1-207ENST00000581711 INSL4Q14641 139 aa-0.03□□□□□ -2.41
SMCHD1-207ENST00000581711 C9orf116Q5BN46 136 aaPredicted RBP-0.03□□□□□ -2.41
SMCHD1-207ENST00000581711 SPTBN2O15020 2390 aa-0.03□□□□□ -2.41
SMCHD1-207ENST00000581711 DAPK1P53355 1430 aa-0.04□□□□□ -2.42
SMCHD1-207ENST00000581711 CEP152O94986 1710 aa-0.04□□□□□ -2.42
SMCHD1-207ENST00000581711 SVEP1Q4LDE5 3571 aa-0.04□□□□□ -2.42
SMCHD1-207ENST00000581711 CENPFP49454 3210 aa-0.04□□□□□ -2.42
SMCHD1-207ENST00000581711 PITX3O75364 302 aa-0.04□□□□□ -2.42
SMCHD1-207ENST00000581711 PIPP12273 146 aaPredicted RBP-0.04□□□□□ -2.42
SMCHD1-207ENST00000581711 SPRR2EP22531 72 aa-0.04□□□□□ -2.42
SMCHD1-207ENST00000581711 SPRR2BP35325 72 aa-0.04□□□□□ -2.42
SMCHD1-207ENST00000581711 SPRR2AP35326 72 aa-0.04□□□□□ -2.42
SMCHD1-207ENST00000581711 RRAS2P62070 204 aaPredicted RBP-0.04□□□□□ -2.42
SMCHD1-207ENST00000581711 UBE2G1P62253 170 aa-0.04□□□□□ -2.42
SMCHD1-207ENST00000581711 SCIMPQ6UWF3 145 aa-0.04□□□□□ -2.42
SMCHD1-207ENST00000581711 Q6ZUT4 128 aa-0.04□□□□□ -2.42
SMCHD1-207ENST00000581711 UBE2DNLQ8IWF7 75 aa-0.04□□□□□ -2.42
SMCHD1-207ENST00000581711 C10orf82Q8WW14 230 aa-0.04□□□□□ -2.42
SMCHD1-207ENST00000581711 ADGRB1O14514 1584 aa-0.04□□□□□ -2.42
SMCHD1-207ENST00000581711 GOLGA3Q08378 1498 aa-0.04□□□□□ -2.42
SMCHD1-207ENST00000581711 WDFY3Q8IZQ1 3526 aa-0.04□□□□□ -2.42
SMCHD1-207ENST00000581711 IFT172Q9UG01 1749 aa-0.04□□□□□ -2.42
SMCHD1-207ENST00000581711 NWD2Q9ULI1 1742 aa-0.04□□□□□ -2.42
SMCHD1-207ENST00000581711 PRG4Q92954 1404 aaPredicted RBP-0.04□□□□□ -2.42
SMCHD1-207ENST00000581711 DOPEY2Q9Y3R5 2298 aa-0.04□□□□□ -2.42
SMCHD1-207ENST00000581711 IBTKQ9P2D0 1353 aaPredicted RBP-0.05□□□□□ -2.42
SMCHD1-207ENST00000581711 TMEM2Q9UHN6 1383 aa-0.05□□□□□ -2.42
SMCHD1-207ENST00000581711 WNK3Q9BYP7 1800 aa-0.05□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms