RNA–Protein interactions for RNA: ENST00000569074.1

CASC17-201, Transcript of cancer susceptibility 17, humanhuman

TSL 1 (best) BASIC

Gene CASC17, Length 2,059 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC17-201ENST00000569074 IGHV3-64A0A075B6Q5 118 aa3.83□□□□□ -1.8
CASC17-201ENST00000569074 SMIM26A0A096LP01 95 aa3.83□□□□□ -1.8
CASC17-201ENST00000569074 IGLV5-52A0A0A0MRZ9 124 aa3.83□□□□□ -1.8
CASC17-201ENST00000569074 PRAC2D3DTV9 90 aa3.83□□□□□ -1.8
CASC17-201ENST00000569074 M0R1W7 72 aa3.83□□□□□ -1.8
CASC17-201ENST00000569074 RPL39P62891 51 aaKnown RBP3.83□□□□□ -1.8
CASC17-201ENST00000569074 MRPS36P82909 103 aaKnown RBP3.83□□□□□ -1.8
CASC17-201ENST00000569074 C9orf139Q6ZV77 190 aa3.83□□□□□ -1.8
CASC17-201ENST00000569074 GPHB5Q86YW7 130 aa3.83□□□□□ -1.8
CASC17-201ENST00000569074 RPL36ALQ969Q0 106 aaKnown RBP3.83□□□□□ -1.8
CASC17-201ENST00000569074 C16orf95Q9H693 158 aa3.83□□□□□ -1.8
CASC17-201ENST00000569074 DNAJC13O75165 2243 aa3.83□□□□□ -1.8
CASC17-201ENST00000569074 VPS13AQ96RL7 3174 aa3.82□□□□□ -1.8
CASC17-201ENST00000569074 IGHV4OR15-8A0A075B7B6 117 aa3.82□□□□□ -1.8
CASC17-201ENST00000569074 A0A087WW49 117 aa3.82□□□□□ -1.8
CASC17-201ENST00000569074 TRGV5A0A0B4J1U4 118 aa3.82□□□□□ -1.8
CASC17-201ENST00000569074 IGHV3-72A0A0B4J1Y9 119 aa3.82□□□□□ -1.8
CASC17-201ENST00000569074 TRAV12-3A0A0B4J271 114 aa3.82□□□□□ -1.8
CASC17-201ENST00000569074 IGHV3-30-3P0DP02 117 aa3.82□□□□□ -1.8
CASC17-201ENST00000569074 CCL3L1P16619 93 aa3.82□□□□□ -1.8
CASC17-201ENST00000569074 ADAMTSL4-AS1Q5T5F5 129 aa3.82□□□□□ -1.8
CASC17-201ENST00000569074 GFRALQ6UXV0 394 aa3.82□□□□□ -1.8
CASC17-201ENST00000569074 Q6ZS52 159 aa3.82□□□□□ -1.8
CASC17-201ENST00000569074 LINC01561Q8N1V8 128 aa3.82□□□□□ -1.8
CASC17-201ENST00000569074 RNF182Q8N6D2 247 aa3.82□□□□□ -1.8
CASC17-201ENST00000569074 LAMA1P25391 3075 aa3.82□□□□□ -1.8
CASC17-201ENST00000569074 EP300Q09472 2414 aaPredicted RBP3.82□□□□□ -1.8
CASC17-201ENST00000569074 PRRC2AP48634 2157 aaKnown RBP3.82□□□□□ -1.8
CASC17-201ENST00000569074 IGKV3D-7A0A0C4DH55 119 aa3.82□□□□□ -1.8
CASC17-201ENST00000569074 FAM223BA6NKX1 122 aa3.82□□□□□ -1.8
CASC17-201ENST00000569074 DNAL4O96015 105 aa3.82□□□□□ -1.8
CASC17-201ENST00000569074 IGLV1-44P01699 117 aa3.82□□□□□ -1.8
CASC17-201ENST00000569074 IGHG2P01859 326 aa3.82□□□□□ -1.8
CASC17-201ENST00000569074 POLR2KP53803 58 aaKnown RBP3.82□□□□□ -1.8
CASC17-201ENST00000569074 COPS9Q8WXC6 57 aa3.82□□□□□ -1.8
CASC17-201ENST00000569074 PHLDA3Q9Y5J5 127 aa3.82□□□□□ -1.8
CASC17-201ENST00000569074 SPEGQ15772 3267 aa3.82□□□□□ -1.8
CASC17-201ENST00000569074 NACAE9PAV3 2078 aa3.81□□□□□ -1.8
CASC17-201ENST00000569074 CFAP54Q96N23 3096 aa3.81□□□□□ -1.8
CASC17-201ENST00000569074 OTOGLQ3ZCN5 2332 aa3.81□□□□□ -1.8
CASC17-201ENST00000569074 A0A087WVE0 104 aa3.81□□□□□ -1.8
CASC17-201ENST00000569074 RBMY1BA6NDE4 496 aaKnown RBP3.81□□□□□ -1.8
CASC17-201ENST00000569074 RBMY1EA6NEQ0 496 aaKnown RBP3.81□□□□□ -1.8
CASC17-201ENST00000569074 KNCNA6PVL3 124 aa3.81□□□□□ -1.8
CASC17-201ENST00000569074 TIMM17BO60830 172 aa3.81□□□□□ -1.8
CASC17-201ENST00000569074 RBMY1DP0C7P1 496 aaKnown RBP3.81□□□□□ -1.8
CASC17-201ENST00000569074 RBMY1A1P0DJD3 496 aaKnown RBP3.81□□□□□ -1.8
CASC17-201ENST00000569074 RBMY1CP0DJD4 496 aa3.81□□□□□ -1.8
CASC17-201ENST00000569074 S100A4P26447 101 aaKnown RBP3.81□□□□□ -1.8
CASC17-201ENST00000569074 RBMY1FQ15415 496 aaKnown RBP3.81□□□□□ -1.8
CASC17-201ENST00000569074 FAM223AQ8IWN6 122 aa3.81□□□□□ -1.8
CASC17-201ENST00000569074 WFDC11Q8NEX6 87 aa3.81□□□□□ -1.8
CASC17-201ENST00000569074 NUP37Q8NFH4 326 aa3.81□□□□□ -1.8
CASC17-201ENST00000569074 HES7Q9BYE0 225 aa3.81□□□□□ -1.8
CASC17-201ENST00000569074 NDUFA12Q9UI09 145 aa3.81□□□□□ -1.8
CASC17-201ENST00000569074 C22orf24Q9Y442 160 aa3.81□□□□□ -1.8
CASC17-201ENST00000569074 SLC25A15Q9Y619 301 aa3.81□□□□□ -1.8
CASC17-201ENST00000569074 TRIOO75962 3097 aa3.81□□□□□ -1.8
CASC17-201ENST00000569074 GCN1Q92616 2671 aaKnown RBP3.8□□□□□ -1.8
CASC17-201ENST00000569074 IGHV1-18A0A0C4DH31 117 aa3.8□□□□□ -1.8
CASC17-201ENST00000569074 A0A0J9YXV3 536 aa3.8□□□□□ -1.8
CASC17-201ENST00000569074 A0A0U1RQV1 116 aa3.8□□□□□ -1.8
CASC17-201ENST00000569074 C9orf47Q6ZRZ4 202 aa3.8□□□□□ -1.8
CASC17-201ENST00000569074 BRK1Q8WUW1 75 aa3.8□□□□□ -1.8
CASC17-201ENST00000569074 VSIG2Q96IQ7 327 aa3.8□□□□□ -1.8
CASC17-201ENST00000569074 ARRDC1-AS1Q9H2J1 176 aa3.8□□□□□ -1.8
CASC17-201ENST00000569074 Q9H8V8 135 aa3.8□□□□□ -1.8
CASC17-201ENST00000569074 UBE2D4Q9Y2X8 147 aa3.8□□□□□ -1.8
CASC17-201ENST00000569074 TEP1Q99973 2627 aaKnown RBP3.8□□□□□ -1.8
CASC17-201ENST00000569074 MALRD1Q5VYJ5 2156 aa3.8□□□□□ -1.8
CASC17-201ENST00000569074 ZFHX4Q86UP3 3567 aa3.8□□□□□ -1.8
CASC17-201ENST00000569074 IGLV5-37A0A075B6J1 123 aa3.8□□□□□ -1.8
CASC17-201ENST00000569074 TRBV27A0A0K0K1C4 114 aa3.8□□□□□ -1.8
CASC17-201ENST00000569074 XCL1P47992 114 aa3.8□□□□□ -1.8
CASC17-201ENST00000569074 FP248Q71RG6 208 aaPredicted RBP3.8□□□□□ -1.8
CASC17-201ENST00000569074 MRPL53Q96EL3 112 aaKnown RBP3.8□□□□□ -1.8
CASC17-201ENST00000569074 RNF5Q99942 180 aa3.8□□□□□ -1.8
CASC17-201ENST00000569074 XCL2Q9UBD3 114 aa3.8□□□□□ -1.8
CASC17-201ENST00000569074 ZNF580Q9UK33 172 aa3.8□□□□□ -1.8
CASC17-201ENST00000569074 LENEPQ9Y5L5 61 aa3.8□□□□□ -1.8
CASC17-201ENST00000569074 S4R3C0 116 aa3.8□□□□□ -1.8
CASC17-201ENST00000569074 IGHV1-58A0A0C4DH39 117 aa3.79□□□□□ -1.8
CASC17-201ENST00000569074 LOXP28300 417 aaPredicted RBP3.79□□□□□ -1.8
CASC17-201ENST00000569074 C6orf226Q5I0X4 101 aa3.79□□□□□ -1.8
CASC17-201ENST00000569074 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.79□□□□□ -1.8
CASC17-201ENST00000569074 C20orf197Q8N268 126 aa3.79□□□□□ -1.8
CASC17-201ENST00000569074 LINC00846Q9NV44 126 aa3.79□□□□□ -1.8
CASC17-201ENST00000569074 IGHV1-3A0A0C4DH29 117 aa3.79□□□□□ -1.8
CASC17-201ENST00000569074 TRBV6-5A0A0K0K1A5 114 aa3.79□□□□□ -1.8
CASC17-201ENST00000569074 H7BZZ5 65 aa3.79□□□□□ -1.8
CASC17-201ENST00000569074 NBR2O15453 112 aa3.79□□□□□ -1.8
CASC17-201ENST00000569074 NXPH4O95158 308 aa3.79□□□□□ -1.8
CASC17-201ENST00000569074 MDS2Q8NDY4 140 aa3.79□□□□□ -1.8
CASC17-201ENST00000569074 OPRPNQ99935 248 aaPredicted RBP3.79□□□□□ -1.8
CASC17-201ENST00000569074 DEFB127Q9H1M4 99 aa3.79□□□□□ -1.8
CASC17-201ENST00000569074 KIF25-AS1Q9Y6Z4 181 aa3.79□□□□□ -1.8
CASC17-201ENST00000569074 U3KQA8 63 aa3.79□□□□□ -1.8
CASC17-201ENST00000569074 WDFY3Q8IZQ1 3526 aa3.78□□□□□ -1.8
CASC17-201ENST00000569074 CEP250Q9BV73 2442 aa3.78□□□□□ -1.8
CASC17-201ENST00000569074 IGLV11-55A0A075B6I3 123 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms