RNA–Protein interactions for RNA: ENST00000569035.5

NEIL1-221, Transcript of nei like DNA glycosylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEIL1, Length 1,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-221ENST00000569035 NFE4Q86UQ8 179 aa12.81□□□□□ -0.36
NEIL1-221ENST00000569035 C1orf158Q8N1D5 194 aa12.81□□□□□ -0.36
NEIL1-221ENST00000569035 C16orf74Q96GX8 76 aa12.81□□□□□ -0.36
NEIL1-221ENST00000569035 TP73-AS1Q9UF72 201 aa12.81□□□□□ -0.36
NEIL1-221ENST00000569035 SORL1Q92673 2214 aa12.81□□□□□ -0.36
NEIL1-221ENST00000569035 TRBV10-1A0A0K0K1A3 114 aa12.81□□□□□ -0.36
NEIL1-221ENST00000569035 MYMXA0A1B0GTQ4 84 aa12.81□□□□□ -0.36
NEIL1-221ENST00000569035 UBE2V1Q13404 147 aa12.81□□□□□ -0.36
NEIL1-221ENST00000569035 SHISA2Q6UWI4 295 aa12.81□□□□□ -0.36
NEIL1-221ENST00000569035 TRAV8-6A0A0B4J262 113 aa12.8□□□□□ -0.36
NEIL1-221ENST00000569035 DAZ2Q13117 558 aaKnown RBP12.8□□□□□ -0.36
NEIL1-221ENST00000569035 RNASE8Q8TDE3 154 aaKnown RBP12.8□□□□□ -0.36
NEIL1-221ENST00000569035 TM2D2Q9BX73 214 aa12.8□□□□□ -0.36
NEIL1-221ENST00000569035 SPANXA1Q9NS26 97 aa12.8□□□□□ -0.36
NEIL1-221ENST00000569035 RPL39P62891 51 aaKnown RBP12.79□□□□□ -0.36
NEIL1-221ENST00000569035 CMYA5Q8N3K9 4069 aa12.79□□□□□ -0.36
NEIL1-221ENST00000569035 AZU1P20160 251 aa12.79□□□□□ -0.36
NEIL1-221ENST00000569035 OR4C5Q8NGB2 326 aa12.79□□□□□ -0.36
NEIL1-221ENST00000569035 VCX2Q9H322 139 aa12.79□□□□□ -0.36
NEIL1-221ENST00000569035 IGLV4-69A0A075B6H9 119 aa12.78□□□□□ -0.36
NEIL1-221ENST00000569035 TRAV4A0A0B4J268 109 aa12.78□□□□□ -0.36
NEIL1-221ENST00000569035 P0DMU3 169 aa12.78□□□□□ -0.36
NEIL1-221ENST00000569035 FAM231AP0DMU4 169 aa12.78□□□□□ -0.36
NEIL1-221ENST00000569035 FAM231CP0DMU5 169 aa12.78□□□□□ -0.36
NEIL1-221ENST00000569035 PTTG1IPP53801 180 aa12.78□□□□□ -0.36
NEIL1-221ENST00000569035 VAMP3Q15836 100 aa12.78□□□□□ -0.36
NEIL1-221ENST00000569035 COTL1Q14019 142 aa12.77□□□□□ -0.36
NEIL1-221ENST00000569035 CEND1Q8N111 149 aa12.77□□□□□ -0.36
NEIL1-221ENST00000569035 PRADC1Q9BSG0 188 aa12.77□□□□□ -0.36
NEIL1-221ENST00000569035 NOTCH3Q9UM47 2321 aa12.77□□□□□ -0.37
NEIL1-221ENST00000569035 SMIM13P0DJ93 91 aa12.76□□□□□ -0.37
NEIL1-221ENST00000569035 MRPL16Q9NX20 251 aaKnown RBP12.76□□□□□ -0.37
NEIL1-221ENST00000569035 C9orf118A6NHY6 69 aa12.76□□□□□ -0.37
NEIL1-221ENST00000569035 TCTAP57738 103 aa12.76□□□□□ -0.37
NEIL1-221ENST00000569035 TIMM21Q9BVV7 248 aa12.76□□□□□ -0.37
NEIL1-221ENST00000569035 C19orf73Q9NVV2 129 aa12.76□□□□□ -0.37
NEIL1-221ENST00000569035 TRGV1A0A0A0MS02 117 aa12.74□□□□□ -0.37
NEIL1-221ENST00000569035 IGHV3-73A0A0B4J1V6 119 aa12.74□□□□□ -0.37
NEIL1-221ENST00000569035 GCSHP23434 173 aa12.74□□□□□ -0.37
NEIL1-221ENST00000569035 RPL36AP83881 106 aaKnown RBP12.74□□□□□ -0.37
NEIL1-221ENST00000569035 GTF2H5Q6ZYL4 71 aa12.74□□□□□ -0.37
NEIL1-221ENST00000569035 WFDC9Q8NEX5 89 aa12.74□□□□□ -0.37
NEIL1-221ENST00000569035 RPL36ALQ969Q0 106 aaKnown RBP12.74□□□□□ -0.37
NEIL1-221ENST00000569035 IGLV4-3A0A075B6K6 122 aa12.74□□□□□ -0.37
NEIL1-221ENST00000569035 TMEM238LA0A1B0GVL6 79 aa12.74□□□□□ -0.37
NEIL1-221ENST00000569035 A6NJY4 79 aa12.74□□□□□ -0.37
NEIL1-221ENST00000569035 TMEM170BQ5T4T1 132 aa12.74□□□□□ -0.37
NEIL1-221ENST00000569035 DAZ4Q86SG3 579 aaKnown RBP12.74□□□□□ -0.37
NEIL1-221ENST00000569035 AMELXQ99217 191 aa12.74□□□□□ -0.37
NEIL1-221ENST00000569035 HIST1H4GQ99525 98 aa12.74□□□□□ -0.37
NEIL1-221ENST00000569035 DAZ3Q9NR90 486 aaKnown RBP12.74□□□□□ -0.37
NEIL1-221ENST00000569035 NACAE9PAV3 2078 aa12.73□□□□□ -0.37
NEIL1-221ENST00000569035 TRBV7-3A0A075B6L6 115 aa12.73□□□□□ -0.37
NEIL1-221ENST00000569035 IGHV3OR16-12A0A075B7B8 117 aa12.73□□□□□ -0.37
NEIL1-221ENST00000569035 ZNF815PA8K554 130 aa12.73□□□□□ -0.37
NEIL1-221ENST00000569035 RRN3P1Q2M238 152 aa12.73□□□□□ -0.37
NEIL1-221ENST00000569035 C9orf66Q5T8R8 295 aa12.73□□□□□ -0.37
NEIL1-221ENST00000569035 MAPKAPK5-AS1Q8N8E1 139 aa12.73□□□□□ -0.37
NEIL1-221ENST00000569035 OVOL2Q9BRP0 275 aa12.73□□□□□ -0.37
NEIL1-221ENST00000569035 PLEKHB2Q96CS7 222 aa12.72□□□□□ -0.37
NEIL1-221ENST00000569035 K7EQD1 137 aa12.71□□□□□ -0.37
NEIL1-221ENST00000569035 MRPS36P82909 103 aaKnown RBP12.71□□□□□ -0.37
NEIL1-221ENST00000569035 SCGB1D4Q6XE38 83 aa12.71□□□□□ -0.37
NEIL1-221ENST00000569035 LEPROTO15243 131 aa12.71□□□□□ -0.38
NEIL1-221ENST00000569035 CHCHD7Q9BUK0 85 aa12.7□□□□□ -0.38
NEIL1-221ENST00000569035 TTTY13Q9BZ97 58 aa12.7□□□□□ -0.38
NEIL1-221ENST00000569035 PKD1L1Q8TDX9 2849 aa12.7□□□□□ -0.38
NEIL1-221ENST00000569035 LGALS3P17931 250 aaKnown RBP12.69□□□□□ -0.38
NEIL1-221ENST00000569035 CSNK1G2-AS1Q8NCQ2 148 aa12.69□□□□□ -0.38
NEIL1-221ENST00000569035 SPANXB1Q9NS25 103 aaPredicted RBP12.69□□□□□ -0.38
NEIL1-221ENST00000569035 TMEM223A0PJW6 202 aa12.69□□□□□ -0.38
NEIL1-221ENST00000569035 SMIM9A6NGZ8 99 aa12.69□□□□□ -0.38
NEIL1-221ENST00000569035 GIG44P09565 113 aaPredicted RBP12.69□□□□□ -0.38
NEIL1-221ENST00000569035 ZNRF2Q8NHG8 242 aa12.69□□□□□ -0.38
NEIL1-221ENST00000569035 UBE2D4Q9Y2X8 147 aa12.69□□□□□ -0.38
NEIL1-221ENST00000569035 CSDC2Q9Y534 153 aaKnown RBP12.69□□□□□ -0.38
NEIL1-221ENST00000569035 TINCRA0A1B0GVN0 87 aa12.68□□□□□ -0.38
NEIL1-221ENST00000569035 PRM2P04554 102 aa12.68□□□□□ -0.38
NEIL1-221ENST00000569035 Q6ZSN1 163 aa12.68□□□□□ -0.38
NEIL1-221ENST00000569035 TRBV6-4A0A1B0GX49 114 aa12.67□□□□□ -0.38
NEIL1-221ENST00000569035 J3QQQ9 107 aa12.67□□□□□ -0.38
NEIL1-221ENST00000569035 CCL25O15444 150 aa12.67□□□□□ -0.38
NEIL1-221ENST00000569035 GTSF1LQ9H1H1 148 aa12.67□□□□□ -0.38
NEIL1-221ENST00000569035 GAGE10A6NGK3 116 aa12.66□□□□□ -0.38
NEIL1-221ENST00000569035 H7C423 109 aa12.66□□□□□ -0.38
NEIL1-221ENST00000569035 ZNF22P17026 224 aaPredicted RBP12.66□□□□□ -0.38
NEIL1-221ENST00000569035 RPL35AP18077 110 aaKnown RBP12.66□□□□□ -0.38
NEIL1-221ENST00000569035 FXYD2P54710 66 aa12.66□□□□□ -0.38
NEIL1-221ENST00000569035 AMMECR1LQ6DCA0 310 aa12.66□□□□□ -0.38
NEIL1-221ENST00000569035 OR5A1Q8NGJ0 315 aa12.66□□□□□ -0.38
NEIL1-221ENST00000569035 FABP2P12104 132 aa12.66□□□□□ -0.38
NEIL1-221ENST00000569035 DGAT2L7PQ6IED9 249 aa12.66□□□□□ -0.38
NEIL1-221ENST00000569035 Q6ZTI0 123 aa12.66□□□□□ -0.38
NEIL1-221ENST00000569035 NOP10Q9NPE3 64 aaKnown RBP12.66□□□□□ -0.38
NEIL1-221ENST00000569035 TRGV2A0A075B6R0 118 aa12.65□□□□□ -0.38
NEIL1-221ENST00000569035 A0A1B0GWB2 263 aa12.65□□□□□ -0.38
NEIL1-221ENST00000569035 SRSF9Q13242 221 aaKnown RBP eCLIP12.65□□□□□ -0.38
NEIL1-221ENST00000569035 Q6ZVH6 145 aa12.65□□□□□ -0.38
NEIL1-221ENST00000569035 ZNF479Q96JC4 524 aa12.65□□□□□ -0.38
NEIL1-221ENST00000569035 KIR2DL5BQ8NHK3 375 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms