RNA–Protein interactions for RNA: ENST00000565602.5

EDC3-208, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 5

Gene EDC3, Length 1,862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-208ENST00000565602 SNHG12Q9BXW3 62 aa13.19□□□□□ -0.3
EDC3-208ENST00000565602 MRPL35Q9NZE8 188 aaKnown RBP13.19□□□□□ -0.3
EDC3-208ENST00000565602 TRAV4A0A0B4J268 109 aa13.18□□□□□ -0.3
EDC3-208ENST00000565602 RPL39P62891 51 aaKnown RBP13.18□□□□□ -0.3
EDC3-208ENST00000565602 SBSPONQ8IVN8 264 aa13.18□□□□□ -0.3
EDC3-208ENST00000565602 STPG4Q8N801 248 aa13.18□□□□□ -0.3
EDC3-208ENST00000565602 MRAPQ8TCY5 172 aa13.18□□□□□ -0.3
EDC3-208ENST00000565602 LBHQ53QV2 105 aaPredicted RBP13.17□□□□□ -0.3
EDC3-208ENST00000565602 TIMM17AQ99595 171 aa13.17□□□□□ -0.3
EDC3-208ENST00000565602 IGIPA6NJ69 53 aa13.16□□□□□ -0.3
EDC3-208ENST00000565602 F8VRH5 84 aa13.16□□□□□ -0.3
EDC3-208ENST00000565602 COX8AP10176 69 aa13.16□□□□□ -0.3
EDC3-208ENST00000565602 PLNP26678 52 aa13.16□□□□□ -0.3
EDC3-208ENST00000565602 RNF183Q96D59 192 aa13.16□□□□□ -0.3
EDC3-208ENST00000565602 TMEM141Q96I45 108 aa13.16□□□□□ -0.3
EDC3-208ENST00000565602 TP73-AS1Q9UF72 201 aa13.16□□□□□ -0.3
EDC3-208ENST00000565602 X6R8D5 127 aa13.16□□□□□ -0.3
EDC3-208ENST00000565602 TENM3Q9P273 2699 aa13.16□□□□□ -0.3
EDC3-208ENST00000565602 ZNF479Q96JC4 524 aa13.16□□□□□ -0.3
EDC3-208ENST00000565602 OVOL2Q9BRP0 275 aa13.16□□□□□ -0.3
EDC3-208ENST00000565602 MRPS16Q9Y3D3 137 aaKnown RBP13.16□□□□□ -0.3
EDC3-208ENST00000565602 CHTOPQ9Y3Y2 248 aaKnown RBP13.16□□□□□ -0.3
EDC3-208ENST00000565602 C20orf203Q8NBC4 194 aa13.15□□□□□ -0.3
EDC3-208ENST00000565602 C2orf88Q9BSF0 95 aa13.14□□□□□ -0.31
EDC3-208ENST00000565602 RETNQ9HD89 108 aa13.14□□□□□ -0.31
EDC3-208ENST00000565602 Q9UF83 564 aa13.14□□□□□ -0.31
EDC3-208ENST00000565602 HHLA3Q9XRX5 114 aa13.14□□□□□ -0.31
EDC3-208ENST00000565602 TM2D3Q9BRN9 247 aa13.13□□□□□ -0.31
EDC3-208ENST00000565602 COL7A1Q02388 2944 aa13.13□□□□□ -0.31
EDC3-208ENST00000565602 GAGE12BA1L429 117 aa13.12□□□□□ -0.31
EDC3-208ENST00000565602 K7EQD1 137 aa13.12□□□□□ -0.31
EDC3-208ENST00000565602 GAGE7O76087 117 aa13.12□□□□□ -0.31
EDC3-208ENST00000565602 GAGE12FP0CL80 117 aa13.12□□□□□ -0.31
EDC3-208ENST00000565602 GAGE12GP0CL81 117 aa13.12□□□□□ -0.31
EDC3-208ENST00000565602 GAGE12IP0CL82 117 aa13.12□□□□□ -0.31
EDC3-208ENST00000565602 TCTAP57738 103 aa13.12□□□□□ -0.31
EDC3-208ENST00000565602 ZC2HC1BQ5TFG8 222 aa13.12□□□□□ -0.31
EDC3-208ENST00000565602 PRSS29PA6NIE9 313 aa13.12□□□□□ -0.31
EDC3-208ENST00000565602 OR11H2Q8NH07 326 aa13.12□□□□□ -0.31
EDC3-208ENST00000565602 TRGV2A0A075B6R0 118 aa13.11□□□□□ -0.31
EDC3-208ENST00000565602 TRBV10-1A0A0K0K1A3 114 aa13.11□□□□□ -0.31
EDC3-208ENST00000565602 CIDEAO60543 219 aa13.11□□□□□ -0.31
EDC3-208ENST00000565602 FGF6P10767 208 aa13.11□□□□□ -0.31
EDC3-208ENST00000565602 NMUP48645 174 aa13.1□□□□□ -0.31
EDC3-208ENST00000565602 PMVKQ15126 192 aa13.1□□□□□ -0.31
EDC3-208ENST00000565602 B9D2Q9BPU9 175 aa13.1□□□□□ -0.31
EDC3-208ENST00000565602 SMIM9A6NGZ8 99 aa13.1□□□□□ -0.31
EDC3-208ENST00000565602 BATFQ16520 125 aa13.09□□□□□ -0.31
EDC3-208ENST00000565602 BOD1L2Q8IYS8 172 aa13.09□□□□□ -0.31
EDC3-208ENST00000565602 Q8NAQ8 132 aa13.09□□□□□ -0.31
EDC3-208ENST00000565602 RPL36AP83881 106 aaKnown RBP13.08□□□□□ -0.32
EDC3-208ENST00000565602 COTL1Q14019 142 aa13.08□□□□□ -0.32
EDC3-208ENST00000565602 ZNRF2Q8NHG8 242 aa13.08□□□□□ -0.32
EDC3-208ENST00000565602 PHLDA1Q8WV24 401 aaPredicted RBP13.08□□□□□ -0.32
EDC3-208ENST00000565602 RPL36ALQ969Q0 106 aaKnown RBP13.08□□□□□ -0.32
EDC3-208ENST00000565602 TRBV7-3A0A075B6L6 115 aa13.08□□□□□ -0.32
EDC3-208ENST00000565602 IGKV2D-26A0A0A0MRZ7 120 aa13.08□□□□□ -0.32
EDC3-208ENST00000565602 IGHV3-38A0A0C4DH36 116 aa13.08□□□□□ -0.32
EDC3-208ENST00000565602 DLEU1O43261 78 aa13.08□□□□□ -0.32
EDC3-208ENST00000565602 SLC25A29Q8N8R3 303 aa13.08□□□□□ -0.32
EDC3-208ENST00000565602 SPATA25Q9BR10 227 aa13.08□□□□□ -0.32
EDC3-208ENST00000565602 CHCHD7Q9BUK0 85 aa13.08□□□□□ -0.32
EDC3-208ENST00000565602 CST9LQ9H4G1 147 aa13.08□□□□□ -0.32
EDC3-208ENST00000565602 EMP1P54849 157 aa13.07□□□□□ -0.32
EDC3-208ENST00000565602 C2orf91Q6ZV80 131 aa13.07□□□□□ -0.32
EDC3-208ENST00000565602 IGLV4-69A0A075B6H9 119 aa13.06□□□□□ -0.32
EDC3-208ENST00000565602 IGHV4-28A0A0C4DH34 117 aa13.06□□□□□ -0.32
EDC3-208ENST00000565602 PAPPA-AS1Q5QFB9 102 aa13.06□□□□□ -0.32
EDC3-208ENST00000565602 PCP2Q8IVA1 136 aa13.06□□□□□ -0.32
EDC3-208ENST00000565602 PYGO1Q9Y3Y4 419 aa13.06□□□□□ -0.32
EDC3-208ENST00000565602 IGLV4-3A0A075B6K6 122 aa13.06□□□□□ -0.32
EDC3-208ENST00000565602 MIFP14174 115 aa13.06□□□□□ -0.32
EDC3-208ENST00000565602 FBN3Q75N90 2809 aa13.05□□□□□ -0.32
EDC3-208ENST00000565602 HINT1P49773 126 aaPredicted RBP13.05□□□□□ -0.32
EDC3-208ENST00000565602 LINC00612Q8N6U2 182 aa13.05□□□□□ -0.32
EDC3-208ENST00000565602 OPRPNQ99935 248 aaPredicted RBP13.05□□□□□ -0.32
EDC3-208ENST00000565602 TRGV4A0A0C4DH28 118 aa13.04□□□□□ -0.32
EDC3-208ENST00000565602 TRBV6-4A0A1B0GX49 114 aa13.04□□□□□ -0.32
EDC3-208ENST00000565602 NPSP0C0P6 89 aa13.04□□□□□ -0.32
EDC3-208ENST00000565602 DEFB4AO15263 64 aa13.04□□□□□ -0.32
EDC3-208ENST00000565602 UBE2D3P61077 147 aa13.04□□□□□ -0.32
EDC3-208ENST00000565602 UBE2D2P62837 147 aa13.04□□□□□ -0.32
EDC3-208ENST00000565602 DAZ4Q86SG3 579 aaKnown RBP13.04□□□□□ -0.32
EDC3-208ENST00000565602 DAZ3Q9NR90 486 aaKnown RBP13.04□□□□□ -0.32
EDC3-208ENST00000565602 SPANXA1Q9NS26 97 aa13.04□□□□□ -0.32
EDC3-208ENST00000565602 GAGE12JA6NER3 117 aa13.03□□□□□ -0.32
EDC3-208ENST00000565602 C11orf86A6NJI1 115 aa13.03□□□□□ -0.32
EDC3-208ENST00000565602 GAGE1Q13065 139 aa13.03□□□□□ -0.32
EDC3-208ENST00000565602 GAGE4Q13068 117 aa13.03□□□□□ -0.32
EDC3-208ENST00000565602 GAGE5Q13069 117 aa13.03□□□□□ -0.32
EDC3-208ENST00000565602 GAGE13Q4V321 117 aa13.03□□□□□ -0.32
EDC3-208ENST00000565602 TMEM97Q5BJF2 176 aa13.03□□□□□ -0.32
EDC3-208ENST00000565602 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.02□□□□□ -0.32
EDC3-208ENST00000565602 IGKV2-29A2NJV5 120 aaPredicted RBP13.02□□□□□ -0.32
EDC3-208ENST00000565602 SIVA1O15304 175 aa13.02□□□□□ -0.32
EDC3-208ENST00000565602 UBE2D4Q9Y2X8 147 aa13.02□□□□□ -0.32
EDC3-208ENST00000565602 A0A1B0GV90 55 aa13.02□□□□□ -0.33
EDC3-208ENST00000565602 CRYBA4P53673 196 aa13.02□□□□□ -0.33
EDC3-208ENST00000565602 FHL2Q14192 279 aa13.02□□□□□ -0.33
EDC3-208ENST00000565602 VCX2Q9H322 139 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms