RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 PIK3CD-AS1Q5SR53 167 aa6.8□□□□□ -1.32
LINC00838-201ENST00000562956 SPXQ9BT56 116 aa6.8□□□□□ -1.32
LINC00838-201ENST00000562956 A8MWV9 139 aa6.8□□□□□ -1.32
LINC00838-201ENST00000562956 J3QR89 54 aa6.8□□□□□ -1.32
LINC00838-201ENST00000562956 PRSS1P07477 247 aa6.8□□□□□ -1.32
LINC00838-201ENST00000562956 P0DMU3 169 aa6.8□□□□□ -1.32
LINC00838-201ENST00000562956 FAM231AP0DMU4 169 aa6.8□□□□□ -1.32
LINC00838-201ENST00000562956 FAM231CP0DMU5 169 aa6.8□□□□□ -1.32
LINC00838-201ENST00000562956 IL17DQ8TAD2 202 aa6.8□□□□□ -1.32
LINC00838-201ENST00000562956 TOMM6Q96B49 74 aa6.8□□□□□ -1.32
LINC00838-201ENST00000562956 ZNF479Q96JC4 524 aa6.8□□□□□ -1.32
LINC00838-201ENST00000562956 SS18L2Q9UHA2 77 aa6.8□□□□□ -1.32
LINC00838-201ENST00000562956 ATRQ13535 2644 aa6.79□□□□□ -1.32
LINC00838-201ENST00000562956 TRBV27A0A0K0K1C4 114 aa6.79□□□□□ -1.32
LINC00838-201ENST00000562956 A0A1B0GWB2 263 aa6.79□□□□□ -1.32
LINC00838-201ENST00000562956 VCYO14598 125 aa6.79□□□□□ -1.32
LINC00838-201ENST00000562956 C9orf66Q5T8R8 295 aa6.79□□□□□ -1.32
LINC00838-201ENST00000562956 Q6ZSN1 163 aa6.79□□□□□ -1.32
LINC00838-201ENST00000562956 CSNK1G2-AS1Q8NCQ2 148 aa6.79□□□□□ -1.32
LINC00838-201ENST00000562956 TRRAPQ9Y4A5 3859 aa6.79□□□□□ -1.32
LINC00838-201ENST00000562956 ATP5LO75964 103 aa6.79□□□□□ -1.32
LINC00838-201ENST00000562956 ODF1Q14990 250 aa6.79□□□□□ -1.32
LINC00838-201ENST00000562956 C2orf66Q6UXQ4 117 aa6.79□□□□□ -1.32
LINC00838-201ENST00000562956 SCGB1A1P11684 91 aa6.78□□□□□ -1.32
LINC00838-201ENST00000562956 ZFP2Q6ZN57 461 aa6.78□□□□□ -1.32
LINC00838-201ENST00000562956 KIR2DL4Q99706 377 aa6.78□□□□□ -1.32
LINC00838-201ENST00000562956 Q9UF83 564 aa6.78□□□□□ -1.32
LINC00838-201ENST00000562956 TEP1Q99973 2627 aaKnown RBP6.78□□□□□ -1.32
LINC00838-201ENST00000562956 TMEM263Q8WUH6 116 aaKnown RBP6.78□□□□□ -1.32
LINC00838-201ENST00000562956 SCGB3A1Q96QR1 104 aa6.78□□□□□ -1.32
LINC00838-201ENST00000562956 TRBV25-1A0A075B6N4 114 aa6.77□□□□□ -1.33
LINC00838-201ENST00000562956 TRGV1A0A0A0MS02 117 aa6.77□□□□□ -1.33
LINC00838-201ENST00000562956 IGLL5B9A064 214 aa6.77□□□□□ -1.33
LINC00838-201ENST00000562956 GAGE13Q4V321 117 aa6.77□□□□□ -1.33
LINC00838-201ENST00000562956 C1QTNF4Q9BXJ3 329 aa6.77□□□□□ -1.33
LINC00838-201ENST00000562956 EDA2RQ9HAV5 297 aa6.77□□□□□ -1.33
LINC00838-201ENST00000562956 RS1O15537 224 aa6.77□□□□□ -1.33
LINC00838-201ENST00000562956 MT-ATP8P03928 68 aa6.77□□□□□ -1.33
LINC00838-201ENST00000562956 SPINK8P0C7L1 97 aa6.77□□□□□ -1.33
LINC00838-201ENST00000562956 PLAC8L1A1L4L8 177 aa6.77□□□□□ -1.33
LINC00838-201ENST00000562956 H7C1H1 209 aa6.77□□□□□ -1.33
LINC00838-201ENST00000562956 APOMO95445 188 aa6.77□□□□□ -1.33
LINC00838-201ENST00000562956 RPL39P62891 51 aaKnown RBP6.77□□□□□ -1.33
LINC00838-201ENST00000562956 ZC2HC1BQ5TFG8 222 aa6.77□□□□□ -1.33
LINC00838-201ENST00000562956 Q6ZTI0 123 aa6.77□□□□□ -1.33
LINC00838-201ENST00000562956 ZMAT4Q9H898 229 aa6.77□□□□□ -1.33
LINC00838-201ENST00000562956 TP53TG1Q9Y2A0 90 aa6.77□□□□□ -1.33
LINC00838-201ENST00000562956 TSHBP01222 138 aa6.76□□□□□ -1.33
LINC00838-201ENST00000562956 KRTAP24-1Q3LI83 254 aa6.76□□□□□ -1.33
LINC00838-201ENST00000562956 PHLDA1Q8WV24 401 aaPredicted RBP6.76□□□□□ -1.33
LINC00838-201ENST00000562956 RNF183Q96D59 192 aa6.76□□□□□ -1.33
LINC00838-201ENST00000562956 SPATA25Q9BR10 227 aa6.76□□□□□ -1.33
LINC00838-201ENST00000562956 NOP10Q9NPE3 64 aaKnown RBP6.76□□□□□ -1.33
LINC00838-201ENST00000562956 RHODO00212 210 aa6.76□□□□□ -1.33
LINC00838-201ENST00000562956 CEND1Q8N111 149 aa6.76□□□□□ -1.33
LINC00838-201ENST00000562956 MAPKAPK5-AS1Q8N8E1 139 aa6.76□□□□□ -1.33
LINC00838-201ENST00000562956 HIST1H4GQ99525 98 aa6.76□□□□□ -1.33
LINC00838-201ENST00000562956 MRPL35Q9NZE8 188 aaKnown RBP6.76□□□□□ -1.33
LINC00838-201ENST00000562956 CYSLTR1Q9Y271 337 aa6.76□□□□□ -1.33
LINC00838-201ENST00000562956 F8W1H4 67 aa6.75□□□□□ -1.33
LINC00838-201ENST00000562956 I3L3M4 83 aa6.75□□□□□ -1.33
LINC00838-201ENST00000562956 SIVA1O15304 175 aa6.75□□□□□ -1.33
LINC00838-201ENST00000562956 C16orf74Q96GX8 76 aa6.75□□□□□ -1.33
LINC00838-201ENST00000562956 NOTCH3Q9UM47 2321 aa6.75□□□□□ -1.33
LINC00838-201ENST00000562956 FBN1P35555 2871 aaKnown RBP6.75□□□□□ -1.33
LINC00838-201ENST00000562956 A0A087WX48 190 aa6.75□□□□□ -1.33
LINC00838-201ENST00000562956 IGHV3-53P01767 116 aa6.75□□□□□ -1.33
LINC00838-201ENST00000562956 NEXN-AS1Q8NBZ9 246 aa6.75□□□□□ -1.33
LINC00838-201ENST00000562956 WFDC9Q8NEX5 89 aa6.75□□□□□ -1.33
LINC00838-201ENST00000562956 BAALCQ8WXS3 180 aa6.75□□□□□ -1.33
LINC00838-201ENST00000562956 HHLA3Q9XRX5 114 aa6.75□□□□□ -1.33
LINC00838-201ENST00000562956 BAHCC1Q9P281 2608 aa6.75□□□□□ -1.33
LINC00838-201ENST00000562956 IGIPA6NJ69 53 aa6.74□□□□□ -1.33
LINC00838-201ENST00000562956 E9PLD3 99 aa6.74□□□□□ -1.33
LINC00838-201ENST00000562956 IGKCP01834 107 aa6.74□□□□□ -1.33
LINC00838-201ENST00000562956 DAZ2Q13117 558 aaKnown RBP6.74□□□□□ -1.33
LINC00838-201ENST00000562956 C12orf74Q32Q52 190 aa6.74□□□□□ -1.33
LINC00838-201ENST00000562956 TNFRSF18Q9Y5U5 241 aa6.74□□□□□ -1.33
LINC00838-201ENST00000562956 DPM2O94777 84 aa6.74□□□□□ -1.33
LINC00838-201ENST00000562956 RRN3P1Q2M238 152 aa6.74□□□□□ -1.33
LINC00838-201ENST00000562956 TRAV12-1A0A0B4J245 112 aa6.73□□□□□ -1.33
LINC00838-201ENST00000562956 LOC107984156A0A0G2JMH3 177 aa6.73□□□□□ -1.33
LINC00838-201ENST00000562956 RHOHQ15669 191 aa6.73□□□□□ -1.33
LINC00838-201ENST00000562956 ARL17AQ8IVW1 177 aa6.73□□□□□ -1.33
LINC00838-201ENST00000562956 XGP55808 180 aa6.73□□□□□ -1.33
LINC00838-201ENST00000562956 NACAE9PAV3 2078 aa6.73□□□□□ -1.33
LINC00838-201ENST00000562956 PRSS29PA6NIE9 313 aa6.73□□□□□ -1.33
LINC00838-201ENST00000562956 TRAV4A0A0B4J268 109 aa6.72□□□□□ -1.33
LINC00838-201ENST00000562956 B5MCH6 92 aa6.72□□□□□ -1.33
LINC00838-201ENST00000562956 F8VRH5 84 aa6.72□□□□□ -1.33
LINC00838-201ENST00000562956 GAGE7O76087 117 aa6.72□□□□□ -1.33
LINC00838-201ENST00000562956 GAGE12FP0CL80 117 aa6.72□□□□□ -1.33
LINC00838-201ENST00000562956 GAGE12GP0CL81 117 aa6.72□□□□□ -1.33
LINC00838-201ENST00000562956 GAGE12IP0CL82 117 aa6.72□□□□□ -1.33
LINC00838-201ENST00000562956 PSMB2P49721 201 aa6.72□□□□□ -1.33
LINC00838-201ENST00000562956 NFE4Q86UQ8 179 aa6.72□□□□□ -1.33
LINC00838-201ENST00000562956 EMP1P54849 157 aa6.72□□□□□ -1.33
LINC00838-201ENST00000562956 C20orf203Q8NBC4 194 aa6.72□□□□□ -1.33
LINC00838-201ENST00000562956 TIMM17AQ99595 171 aa6.72□□□□□ -1.33
LINC00838-201ENST00000562956 OVOL2Q9BRP0 275 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms