RNA–Protein interactions for RNA: ENST00000562046.1

CNOT1-203, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-203ENST00000562046 ERC2-IT1O76042 136 aa1.54□□□□□ -2.16
CNOT1-203ENST00000562046 GNGT1P63211 74 aa1.54□□□□□ -2.16
CNOT1-203ENST00000562046 HMGN3Q15651 99 aa1.54□□□□□ -2.16
CNOT1-203ENST00000562046 MPV17LQ2QL34 196 aa1.54□□□□□ -2.16
CNOT1-203ENST00000562046 ZNF791Q3KP31 576 aaPredicted RBP1.54□□□□□ -2.16
CNOT1-203ENST00000562046 SPATA45Q537H7 98 aa1.54□□□□□ -2.16
CNOT1-203ENST00000562046 KRTAP26-1Q6PEX3 210 aa1.54□□□□□ -2.16
CNOT1-203ENST00000562046 C9orf163Q8N9P6 203 aa1.54□□□□□ -2.16
CNOT1-203ENST00000562046 SPTSSBQ8NFR3 76 aa1.54□□□□□ -2.16
CNOT1-203ENST00000562046 OR8B3Q8NGG8 313 aa1.54□□□□□ -2.16
CNOT1-203ENST00000562046 NXT2Q9NPJ8 142 aaKnown RBP1.54□□□□□ -2.16
CNOT1-203ENST00000562046 CDC42SE1Q9NRR8 79 aa1.54□□□□□ -2.16
CNOT1-203ENST00000562046 HIGD1BQ9P298 99 aa1.54□□□□□ -2.16
CNOT1-203ENST00000562046 LHFPL6Q9Y693 200 aa1.54□□□□□ -2.16
CNOT1-203ENST00000562046 BLMP54132 1417 aaPredicted RBP1.54□□□□□ -2.16
CNOT1-203ENST00000562046 NRXN1Q9ULB1 1477 aa1.54□□□□□ -2.16
CNOT1-203ENST00000562046 RAPGEF6Q8TEU7 1601 aa1.54□□□□□ -2.16
CNOT1-203ENST00000562046 MYOFQ9NZM1 2061 aa1.54□□□□□ -2.16
CNOT1-203ENST00000562046 HMCN1Q96RW7 5635 aa1.53□□□□□ -2.16
CNOT1-203ENST00000562046 TMSB15BA0A087X1C1 80 aa1.53□□□□□ -2.16
CNOT1-203ENST00000562046 TRAV12-1A0A0B4J245 112 aa1.53□□□□□ -2.16
CNOT1-203ENST00000562046 CXorf51AA0A1B0GTR3 108 aa1.53□□□□□ -2.16
CNOT1-203ENST00000562046 TCRBV4S1A1TA0A5B7 111 aa1.53□□□□□ -2.16
CNOT1-203ENST00000562046 EFCAB5A4FU69 1503 aa1.53□□□□□ -2.16
CNOT1-203ENST00000562046 H7BZZ5 65 aa1.53□□□□□ -2.16
CNOT1-203ENST00000562046 KDM6BO15054 1643 aa1.53□□□□□ -2.16
CNOT1-203ENST00000562046 NDUFC1O43677 76 aa1.53□□□□□ -2.16
CNOT1-203ENST00000562046 CXCL8P10145 99 aa1.53□□□□□ -2.16
CNOT1-203ENST00000562046 COL4A5P29400 1685 aa1.53□□□□□ -2.16
CNOT1-203ENST00000562046 TOP2BQ02880 1626 aa1.53□□□□□ -2.16
CNOT1-203ENST00000562046 RPL7L1Q6DKI1 246 aaKnown RBP1.53□□□□□ -2.16
CNOT1-203ENST00000562046 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.53□□□□□ -2.16
CNOT1-203ENST00000562046 ZNF833PQ6ZTB9 187 aa1.53□□□□□ -2.16
CNOT1-203ENST00000562046 LINC01600Q96MT4 127 aa1.53□□□□□ -2.16
CNOT1-203ENST00000562046 ODF3Q96PU9 254 aa1.53□□□□□ -2.16
CNOT1-203ENST00000562046 TIMM21Q9BVV7 248 aa1.53□□□□□ -2.16
CNOT1-203ENST00000562046 CYP4F30PQ9H0H9 118 aa1.53□□□□□ -2.16
CNOT1-203ENST00000562046 HEATR5BQ9P2D3 2071 aa1.53□□□□□ -2.16
CNOT1-203ENST00000562046 ZGRF1Q86YA3 2104 aa1.52□□□□□ -2.17
CNOT1-203ENST00000562046 LAMA4Q16363 1823 aa1.52□□□□□ -2.17
CNOT1-203ENST00000562046 COL4A1P02462 1669 aa1.52□□□□□ -2.17
CNOT1-203ENST00000562046 ZNF142P52746 1687 aaPredicted RBP1.52□□□□□ -2.17
CNOT1-203ENST00000562046 TIAM1Q13009 1591 aa1.52□□□□□ -2.17
CNOT1-203ENST00000562046 ABCC1P33527 1531 aa1.52□□□□□ -2.17
CNOT1-203ENST00000562046 KCPQ6ZWJ8 1503 aa1.52□□□□□ -2.17
CNOT1-203ENST00000562046 TRBV7-1A0A0A6YYK4 115 aa1.52□□□□□ -2.17
CNOT1-203ENST00000562046 A6NIN4 97 aa1.52□□□□□ -2.17
CNOT1-203ENST00000562046 TFF1P04155 84 aa1.52□□□□□ -2.17
CNOT1-203ENST00000562046 EFNA4P52798 201 aa1.52□□□□□ -2.17
CNOT1-203ENST00000562046 Q6ZRN7 208 aaPredicted RBP1.52□□□□□ -2.17
CNOT1-203ENST00000562046 CYP2G1PQ6ZSU1 146 aa1.52□□□□□ -2.17
CNOT1-203ENST00000562046 Q6ZTI0 123 aa1.52□□□□□ -2.17
CNOT1-203ENST00000562046 C18orf32Q8TCD1 76 aa1.52□□□□□ -2.17
CNOT1-203ENST00000562046 ZNF625Q96I27 306 aaPredicted RBP1.52□□□□□ -2.17
CNOT1-203ENST00000562046 C22orf24Q9Y442 160 aa1.52□□□□□ -2.17
CNOT1-203ENST00000562046 RTTNQ86VV8 2226 aa1.52□□□□□ -2.17
CNOT1-203ENST00000562046 AFDNP55196 1824 aaKnown RBP1.52□□□□□ -2.17
CNOT1-203ENST00000562046 DIP2CQ9Y2E4 1556 aa1.51□□□□□ -2.17
CNOT1-203ENST00000562046 DUOX2Q9NRD8 1548 aa1.51□□□□□ -2.17
CNOT1-203ENST00000562046 LRRC9Q6ZRR7 1453 aa1.51□□□□□ -2.17
CNOT1-203ENST00000562046 HEATR1Q9H583 2144 aaKnown RBP1.51□□□□□ -2.17
CNOT1-203ENST00000562046 DOCK11Q5JSL3 2073 aa1.51□□□□□ -2.17
CNOT1-203ENST00000562046 KANTRA0A1W2PQU2 76 aa1.51□□□□□ -2.17
CNOT1-203ENST00000562046 C2orf70A6NJV1 201 aa1.51□□□□□ -2.17
CNOT1-203ENST00000562046 F2Z2F3 143 aa1.51□□□□□ -2.17
CNOT1-203ENST00000562046 SIX6O95475 246 aa1.51□□□□□ -2.17
CNOT1-203ENST00000562046 UBE2D3P61077 147 aa1.51□□□□□ -2.17
CNOT1-203ENST00000562046 UBE2D2P62837 147 aa1.51□□□□□ -2.17
CNOT1-203ENST00000562046 ERHP84090 104 aaKnown RBP1.51□□□□□ -2.17
CNOT1-203ENST00000562046 PMCHL1Q16048 86 aa1.51□□□□□ -2.17
CNOT1-203ENST00000562046 CFAP126Q5VTH2 177 aa1.51□□□□□ -2.17
CNOT1-203ENST00000562046 VMO1Q7Z5L0 202 aa1.51□□□□□ -2.17
CNOT1-203ENST00000562046 CLECL1Q8IZS7 167 aa1.51□□□□□ -2.17
CNOT1-203ENST00000562046 FAM167A-AS1Q96KT0 104 aa1.51□□□□□ -2.17
CNOT1-203ENST00000562046 SDK1Q7Z5N4 2213 aa1.51□□□□□ -2.17
CNOT1-203ENST00000562046 CEP192Q8TEP8 1941 aa1.5□□□□□ -2.17
CNOT1-203ENST00000562046 TRAV12-3A0A0B4J271 114 aa1.5□□□□□ -2.17
CNOT1-203ENST00000562046 TRAV22A0A0B4J277 110 aa1.5□□□□□ -2.17
CNOT1-203ENST00000562046 A0A0G2JND7 137 aa1.5□□□□□ -2.17
CNOT1-203ENST00000562046 SNRPFP62306 86 aaKnown RBP1.5□□□□□ -2.17
CNOT1-203ENST00000562046 KLKP1Q107X0 134 aa1.5□□□□□ -2.17
CNOT1-203ENST00000562046 Q5VV11 94 aa1.5□□□□□ -2.17
CNOT1-203ENST00000562046 C2orf82Q6UX34 121 aa1.5□□□□□ -2.17
CNOT1-203ENST00000562046 FAM223AQ8IWN6 122 aa1.5□□□□□ -2.17
CNOT1-203ENST00000562046 IFI27L1Q96BM0 104 aa1.5□□□□□ -2.17
CNOT1-203ENST00000562046 BPESC1Q9GZL8 116 aa1.5□□□□□ -2.17
CNOT1-203ENST00000562046 MANBALQ9NQG1 85 aa1.5□□□□□ -2.17
CNOT1-203ENST00000562046 ITSN2Q9NZM3 1697 aa1.5□□□□□ -2.17
CNOT1-203ENST00000562046 ABCA6Q8N139 1617 aa1.5□□□□□ -2.17
CNOT1-203ENST00000562046 HMGXB3Q12766 1538 aa1.5□□□□□ -2.17
CNOT1-203ENST00000562046 ZFHX2Q9C0A1 2572 aaPredicted RBP1.5□□□□□ -2.17
CNOT1-203ENST00000562046 RP1P56715 2156 aa1.49□□□□□ -2.17
CNOT1-203ENST00000562046 A0A1B0GUL6 1792 aa1.49□□□□□ -2.17
CNOT1-203ENST00000562046 SIPA1L3O60292 1781 aaPredicted RBP1.49□□□□□ -2.17
CNOT1-203ENST00000562046 ESPL1Q14674 2120 aa1.49□□□□□ -2.17
CNOT1-203ENST00000562046 TRBV7-3A0A075B6L6 115 aa1.49□□□□□ -2.17
CNOT1-203ENST00000562046 A0A087WWC5 75 aa1.49□□□□□ -2.17
CNOT1-203ENST00000562046 TEX49A0A1B0GTD5 131 aa1.49□□□□□ -2.17
CNOT1-203ENST00000562046 TMEM30CPA0ZSE6 113 aa1.49□□□□□ -2.17
CNOT1-203ENST00000562046 C7orf77A4D0Y5 90 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms