RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 S100ZQ8WXG8 99 aa2.75□□□□□ -1.97
LRRC28-222ENST00000561431 LEAP2Q969E1 77 aa2.75□□□□□ -1.97
LRRC28-222ENST00000561431 RAB37Q96AX2 223 aa2.75□□□□□ -1.97
LRRC28-222ENST00000561431 AQP10Q96PS8 301 aa2.75□□□□□ -1.97
LRRC28-222ENST00000561431 S100A13Q99584 98 aa2.75□□□□□ -1.97
LRRC28-222ENST00000561431 BET1LQ9NYM9 111 aa2.75□□□□□ -1.97
LRRC28-222ENST00000561431 HILPDAQ9Y5L2 63 aa2.75□□□□□ -1.97
LRRC28-222ENST00000561431 MINOS1-NBL1R4GNA1 71 aa2.75□□□□□ -1.97
LRRC28-222ENST00000561431 AGRNO00468 2067 aa2.74□□□□□ -1.97
LRRC28-222ENST00000561431 DOCK11Q5JSL3 2073 aa2.74□□□□□ -1.97
LRRC28-222ENST00000561431 IGKV1-6A0A0C4DH72 117 aa2.74□□□□□ -1.97
LRRC28-222ENST00000561431 C3orf85A0A1B0GTC6 90 aa2.74□□□□□ -1.97
LRRC28-222ENST00000561431 TMEM30CPA0ZSE6 113 aa2.74□□□□□ -1.97
LRRC28-222ENST00000561431 GABARAPO95166 117 aa2.74□□□□□ -1.97
LRRC28-222ENST00000561431 HRASP01112 189 aa2.74□□□□□ -1.97
LRRC28-222ENST00000561431 IGKV1-39P01597 117 aa2.74□□□□□ -1.97
LRRC28-222ENST00000561431 IGHV3-7P01780 117 aa2.74□□□□□ -1.97
LRRC28-222ENST00000561431 IGKV1D-39P04432 117 aa2.74□□□□□ -1.97
LRRC28-222ENST00000561431 TCRAP04437 139 aa2.74□□□□□ -1.97
LRRC28-222ENST00000561431 CXCL1P09341 107 aa2.74□□□□□ -1.97
LRRC28-222ENST00000561431 INAFM2P0DMQ5 153 aa2.74□□□□□ -1.97
LRRC28-222ENST00000561431 CD24P25063 80 aa2.74□□□□□ -1.97
LRRC28-222ENST00000561431 S100A4P26447 101 aaKnown RBP2.74□□□□□ -1.97
LRRC28-222ENST00000561431 BLCAPP62952 87 aa2.74□□□□□ -1.97
LRRC28-222ENST00000561431 Q0VG73 95 aa2.74□□□□□ -1.97
LRRC28-222ENST00000561431 PEA15Q15121 130 aa2.74□□□□□ -1.97
LRRC28-222ENST00000561431 LINC01554Q52M75 96 aa2.74□□□□□ -1.97
LRRC28-222ENST00000561431 Q56UQ5 140 aa2.74□□□□□ -1.97
LRRC28-222ENST00000561431 C9orf153Q5TBE3 101 aa2.74□□□□□ -1.97
LRRC28-222ENST00000561431 CEMP1Q6PRD7 247 aaPredicted RBP2.74□□□□□ -1.97
LRRC28-222ENST00000561431 OR4B1Q8NGF8 309 aa2.74□□□□□ -1.97
LRRC28-222ENST00000561431 UBALD1Q8TB05 177 aa2.74□□□□□ -1.97
LRRC28-222ENST00000561431 RMI2Q96E14 147 aa2.74□□□□□ -1.97
LRRC28-222ENST00000561431 MRPS24Q96EL2 167 aaKnown RBP2.74□□□□□ -1.97
LRRC28-222ENST00000561431 YPEL2Q96QA6 119 aa2.74□□□□□ -1.97
LRRC28-222ENST00000561431 AGPAT4-IT1Q9H0P7 198 aa2.74□□□□□ -1.97
LRRC28-222ENST00000561431 SND1-IT1Q9HBX3 110 aa2.74□□□□□ -1.97
LRRC28-222ENST00000561431 TPRKBQ9Y3C4 175 aa2.74□□□□□ -1.97
LRRC28-222ENST00000561431 TRRAPQ9Y4A5 3859 aa2.73□□□□□ -1.97
LRRC28-222ENST00000561431 TRBV20-1A0A075B6N2 111 aa2.73□□□□□ -1.97
LRRC28-222ENST00000561431 IGHV3-72A0A0B4J1Y9 119 aa2.73□□□□□ -1.97
LRRC28-222ENST00000561431 COLCA2A8K830 154 aa2.73□□□□□ -1.97
LRRC28-222ENST00000561431 TMEM14DPA8MWL7 114 aa2.73□□□□□ -1.97
LRRC28-222ENST00000561431 OOSP1A8MZH6 123 aa2.73□□□□□ -1.97
LRRC28-222ENST00000561431 MCRIP1C9JLW8 97 aa2.73□□□□□ -1.97
LRRC28-222ENST00000561431 M0R2P5 195 aa2.73□□□□□ -1.97
LRRC28-222ENST00000561431 HIST1H2BKO60814 126 aa2.73□□□□□ -1.97
LRRC28-222ENST00000561431 ZNF324O75467 553 aaPredicted RBP2.73□□□□□ -1.97
LRRC28-222ENST00000561431 IGLV2-23P01705 113 aa2.73□□□□□ -1.97
LRRC28-222ENST00000561431 PRM2P04554 102 aa2.73□□□□□ -1.97
LRRC28-222ENST00000561431 HIST1H2BJP06899 126 aa2.73□□□□□ -1.97
LRRC28-222ENST00000561431 SEC11BP0C7V7 166 aa2.73□□□□□ -1.97
LRRC28-222ENST00000561431 CD28P10747 220 aa2.73□□□□□ -1.97
LRRC28-222ENST00000561431 ELK1P19419 428 aa2.73□□□□□ -1.97
LRRC28-222ENST00000561431 ZNF137PP52743 207 aa2.73□□□□□ -1.97
LRRC28-222ENST00000561431 TAS2R45P59539 299 aa2.73□□□□□ -1.97
LRRC28-222ENST00000561431 LGALS9BQ3B8N2 356 aa2.73□□□□□ -1.97
LRRC28-222ENST00000561431 MPV17L2Q567V2 206 aa2.73□□□□□ -1.97
LRRC28-222ENST00000561431 LGALS9CQ6DKI2 356 aa2.73□□□□□ -1.97
LRRC28-222ENST00000561431 ZNF705AQ6ZN79 300 aaPredicted RBP2.73□□□□□ -1.97
LRRC28-222ENST00000561431 ORMDL3Q8N138 153 aa2.73□□□□□ -1.97
LRRC28-222ENST00000561431 HIST3H2BBQ8N257 126 aa2.73□□□□□ -1.97
LRRC28-222ENST00000561431 Q8N6K4 173 aa2.73□□□□□ -1.97
LRRC28-222ENST00000561431 OR4X2Q8NGF9 303 aa2.73□□□□□ -1.97
LRRC28-222ENST00000561431 RBMXL1Q96E39 390 aaKnown RBP2.73□□□□□ -1.97
LRRC28-222ENST00000561431 B9D2Q9BPU9 175 aa2.73□□□□□ -1.97
LRRC28-222ENST00000561431 SHANK2-AS3Q9BTD1 123 aa2.73□□□□□ -1.97
LRRC28-222ENST00000561431 ATG5Q9H1Y0 275 aa2.73□□□□□ -1.97
LRRC28-222ENST00000561431 NDUFB11Q9NX14 153 aa2.73□□□□□ -1.97
LRRC28-222ENST00000561431 C21orf62Q9NYP8 219 aa2.73□□□□□ -1.97
LRRC28-222ENST00000561431 IL36BQ9NZH7 164 aa2.73□□□□□ -1.97
LRRC28-222ENST00000561431 SERP1Q9Y6X1 66 aa2.73□□□□□ -1.97
LRRC28-222ENST00000561431 NOTCH1P46531 2555 aa2.73□□□□□ -1.97
LRRC28-222ENST00000561431 IGLV1-50A0A075B6I6 118 aa2.72□□□□□ -1.97
LRRC28-222ENST00000561431 IGHV3-43A0A0B4J1X8 118 aa2.72□□□□□ -1.97
LRRC28-222ENST00000561431 IGHV1-3A0A0C4DH29 117 aa2.72□□□□□ -1.97
LRRC28-222ENST00000561431 ZNF736B4DX44 427 aaPredicted RBP2.72□□□□□ -1.97
LRRC28-222ENST00000561431 SDCBPO00560 298 aaPredicted RBP2.72□□□□□ -1.97
LRRC28-222ENST00000561431 PDCD5O14737 125 aa2.72□□□□□ -1.97
LRRC28-222ENST00000561431 SYNGR2O43760 224 aa2.72□□□□□ -1.97
LRRC28-222ENST00000561431 IGHV3-11P01762 117 aa2.72□□□□□ -1.97
LRRC28-222ENST00000561431 APOC3P02656 99 aa2.72□□□□□ -1.97
LRRC28-222ENST00000561431 SLC25A5P05141 298 aaKnown RBP2.72□□□□□ -1.97
LRRC28-222ENST00000561431 RNASE4P34096 147 aaKnown RBP2.72□□□□□ -1.97
LRRC28-222ENST00000561431 ZNF816Q0VGE8 651 aaPredicted RBP2.72□□□□□ -1.97
LRRC28-222ENST00000561431 HMGN3Q15651 99 aa2.72□□□□□ -1.97
LRRC28-222ENST00000561431 KHDC3LQ587J8 217 aa2.72□□□□□ -1.97
LRRC28-222ENST00000561431 C10orf99Q6UWK7 81 aa2.72□□□□□ -1.97
LRRC28-222ENST00000561431 C7orf65Q6ZTY9 151 aa2.72□□□□□ -1.97
LRRC28-222ENST00000561431 C6orf201Q7Z4U5 140 aa2.72□□□□□ -1.97
LRRC28-222ENST00000561431 PDPNQ86YL7 162 aa2.72□□□□□ -1.97
LRRC28-222ENST00000561431 BPIFA4PQ86YQ2 179 aa2.72□□□□□ -1.97
LRRC28-222ENST00000561431 C5orf56Q8N8D9 126 aa2.72□□□□□ -1.97
LRRC28-222ENST00000561431 ATP6V0E2Q8NHE4 81 aa2.72□□□□□ -1.97
LRRC28-222ENST00000561431 HYLS1Q96M11 299 aa2.72□□□□□ -1.97
LRRC28-222ENST00000561431 PRELID3AQ96N28 172 aa2.72□□□□□ -1.97
LRRC28-222ENST00000561431 CHAC1Q9BUX1 264 aa2.72□□□□□ -1.97
LRRC28-222ENST00000561431 CST11Q9H112 138 aa2.72□□□□□ -1.97
LRRC28-222ENST00000561431 SMCO4Q9NRQ5 59 aa2.72□□□□□ -1.97
LRRC28-222ENST00000561431 LINC00588Q9Y4M8 146 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms