RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 HUWE1Q7Z6Z7 4374 aaKnown RBP10.18□□□□□ -0.78
RABGGTA-209ENST00000559551 IGLV2-18A0A075B6J9 118 aa10.18□□□□□ -0.78
RABGGTA-209ENST00000559551 M0QY20 66 aa10.18□□□□□ -0.78
RABGGTA-209ENST00000559551 IFI27P40305 119 aaPredicted RBP10.18□□□□□ -0.78
RABGGTA-209ENST00000559551 ZNF479Q96JC4 524 aa10.18□□□□□ -0.78
RABGGTA-209ENST00000559551 H3BUT2 72 aa10.17□□□□□ -0.78
RABGGTA-209ENST00000559551 GAGE7O76087 117 aa10.17□□□□□ -0.78
RABGGTA-209ENST00000559551 GAGE12FP0CL80 117 aa10.17□□□□□ -0.78
RABGGTA-209ENST00000559551 GAGE12GP0CL81 117 aa10.17□□□□□ -0.78
RABGGTA-209ENST00000559551 GAGE12IP0CL82 117 aa10.17□□□□□ -0.78
RABGGTA-209ENST00000559551 ZNF56Q15929 161 aa10.17□□□□□ -0.78
RABGGTA-209ENST00000559551 LINC00612Q8N6U2 182 aa10.17□□□□□ -0.78
RABGGTA-209ENST00000559551 TMEM238C9JI98 176 aa10.16□□□□□ -0.78
RABGGTA-209ENST00000559551 F5H697 171 aa10.16□□□□□ -0.78
RABGGTA-209ENST00000559551 HBDP02042 147 aa10.16□□□□□ -0.78
RABGGTA-209ENST00000559551 P0DMU3 169 aa10.16□□□□□ -0.78
RABGGTA-209ENST00000559551 FAM231AP0DMU4 169 aa10.16□□□□□ -0.78
RABGGTA-209ENST00000559551 FAM231CP0DMU5 169 aa10.16□□□□□ -0.78
RABGGTA-209ENST00000559551 NEGR1Q7Z3B1 354 aa10.16□□□□□ -0.78
RABGGTA-209ENST00000559551 A0A096LNJ9 63 aa10.16□□□□□ -0.78
RABGGTA-209ENST00000559551 PRSS47A8MTI9 375 aa10.16□□□□□ -0.78
RABGGTA-209ENST00000559551 IGHV3-53P01767 116 aa10.16□□□□□ -0.78
RABGGTA-209ENST00000559551 SBSPONQ8IVN8 264 aa10.15□□□□□ -0.78
RABGGTA-209ENST00000559551 DNAH9Q9NYC9 4486 aa10.15□□□□□ -0.78
RABGGTA-209ENST00000559551 A0A1W2PPM0 123 aa10.14□□□□□ -0.79
RABGGTA-209ENST00000559551 CELA1Q9UNI1 258 aa10.14□□□□□ -0.79
RABGGTA-209ENST00000559551 MEGF8Q7Z7M0 2845 aa10.14□□□□□ -0.79
RABGGTA-209ENST00000559551 TRAV4A0A0B4J268 109 aa10.14□□□□□ -0.79
RABGGTA-209ENST00000559551 FAM222AQ5U5X8 452 aa10.14□□□□□ -0.79
RABGGTA-209ENST00000559551 MAP1LC3AQ9H492 121 aa10.14□□□□□ -0.79
RABGGTA-209ENST00000559551 EDA2RQ9HAV5 297 aa10.14□□□□□ -0.79
RABGGTA-209ENST00000559551 SPCS1Q9Y6A9 102 aa10.14□□□□□ -0.79
RABGGTA-209ENST00000559551 FABP2P12104 132 aa10.13□□□□□ -0.79
RABGGTA-209ENST00000559551 MIFP14174 115 aa10.13□□□□□ -0.79
RABGGTA-209ENST00000559551 ZFP2Q6ZN57 461 aa10.13□□□□□ -0.79
RABGGTA-209ENST00000559551 IFI27L1Q96BM0 104 aa10.13□□□□□ -0.79
RABGGTA-209ENST00000559551 DKK2Q9UBU2 259 aa10.13□□□□□ -0.79
RABGGTA-209ENST00000559551 TP53TG1Q9Y2A0 90 aa10.13□□□□□ -0.79
RABGGTA-209ENST00000559551 COL7A1Q02388 2944 aa10.13□□□□□ -0.79
RABGGTA-209ENST00000559551 LINC01546A6NGU7 62 aa10.13□□□□□ -0.79
RABGGTA-209ENST00000559551 SUMO2P61956 95 aaKnown RBP10.13□□□□□ -0.79
RABGGTA-209ENST00000559551 RHODO00212 210 aa10.12□□□□□ -0.79
RABGGTA-209ENST00000559551 DEFB130BP0DP73 79 aa10.12□□□□□ -0.79
RABGGTA-209ENST00000559551 DEFB130AP0DP74 79 aa10.12□□□□□ -0.79
RABGGTA-209ENST00000559551 POLR2KP53803 58 aaKnown RBP10.12□□□□□ -0.79
RABGGTA-209ENST00000559551 SMIM2Q9BVW6 85 aa10.12□□□□□ -0.79
RABGGTA-209ENST00000559551 TRBV6-5A0A0K0K1A5 114 aa10.11□□□□□ -0.79
RABGGTA-209ENST00000559551 CIDEAO60543 219 aa10.11□□□□□ -0.79
RABGGTA-209ENST00000559551 Q8N8P6 123 aa10.11□□□□□ -0.79
RABGGTA-209ENST00000559551 DEFB104AQ8WTQ1 72 aa10.11□□□□□ -0.79
RABGGTA-209ENST00000559551 C20orf78Q9BR46 151 aa10.11□□□□□ -0.79
RABGGTA-209ENST00000559551 HIGD1BQ9P298 99 aa10.11□□□□□ -0.79
RABGGTA-209ENST00000559551 CHTOPQ9Y3Y2 248 aaKnown RBP10.11□□□□□ -0.79
RABGGTA-209ENST00000559551 TRGV2A0A075B6R0 118 aa10.11□□□□□ -0.79
RABGGTA-209ENST00000559551 SMIM13P0DJ93 91 aa10.11□□□□□ -0.79
RABGGTA-209ENST00000559551 C18orf15Q96N68 181 aa10.11□□□□□ -0.79
RABGGTA-209ENST00000559551 NMUP48645 174 aa10.1□□□□□ -0.79
RABGGTA-209ENST00000559551 FHL2Q14192 279 aa10.1□□□□□ -0.79
RABGGTA-209ENST00000559551 NEXN-AS1Q8NBZ9 246 aa10.1□□□□□ -0.79
RABGGTA-209ENST00000559551 LYRM9A8MSI8 78 aa10.1□□□□□ -0.79
RABGGTA-209ENST00000559551 DEFB121Q5J5C9 76 aa10.1□□□□□ -0.79
RABGGTA-209ENST00000559551 NXT2Q9NPJ8 142 aaKnown RBP10.1□□□□□ -0.79
RABGGTA-209ENST00000559551 SDHAF1A6NFY7 115 aa10.09□□□□□ -0.79
RABGGTA-209ENST00000559551 SLC25A29Q8N8R3 303 aa10.09□□□□□ -0.79
RABGGTA-209ENST00000559551 RAB37Q96AX2 223 aa10.09□□□□□ -0.79
RABGGTA-209ENST00000559551 PRKDCP78527 4128 aaKnown RBP10.09□□□□□ -0.79
RABGGTA-209ENST00000559551 SCGB1A1P11684 91 aa10.08□□□□□ -0.8
RABGGTA-209ENST00000559551 RPL32P62910 135 aaKnown RBP10.08□□□□□ -0.8
RABGGTA-209ENST00000559551 MRAPQ8TCY5 172 aa10.08□□□□□ -0.8
RABGGTA-209ENST00000559551 TM2D3Q9BRN9 247 aa10.08□□□□□ -0.8
RABGGTA-209ENST00000559551 PPP1R17O96001 155 aa10.08□□□□□ -0.8
RABGGTA-209ENST00000559551 PCP2Q8IVA1 136 aa10.08□□□□□ -0.8
RABGGTA-209ENST00000559551 NAA38Q9BRA0 125 aaKnown RBP10.08□□□□□ -0.8
RABGGTA-209ENST00000559551 TRBV27A0A0K0K1C4 114 aa10.07□□□□□ -0.8
RABGGTA-209ENST00000559551 LOC100131303A0A0U1RQF7 123 aa10.07□□□□□ -0.8
RABGGTA-209ENST00000559551 ZMAT4Q9H898 229 aa10.06□□□□□ -0.8
RABGGTA-209ENST00000559551 H7C1H1 209 aa10.06□□□□□ -0.8
RABGGTA-209ENST00000559551 K7EQD1 137 aa10.06□□□□□ -0.8
RABGGTA-209ENST00000559551 GCSHP23434 173 aa10.05□□□□□ -0.8
RABGGTA-209ENST00000559551 FCER1GP30273 86 aa10.05□□□□□ -0.8
RABGGTA-209ENST00000559551 ATP5LO75964 103 aa10.05□□□□□ -0.8
RABGGTA-209ENST00000559551 TSHBP01222 138 aa10.05□□□□□ -0.8
RABGGTA-209ENST00000559551 CHAC1Q9BUX1 264 aa10.05□□□□□ -0.8
RABGGTA-209ENST00000559551 C11orf68Q9H3H3 251 aaKnown RBP10.05□□□□□ -0.8
RABGGTA-209ENST00000559551 TRGV4A0A0C4DH28 118 aa10.04□□□□□ -0.8
RABGGTA-209ENST00000559551 TRBV6-4A0A1B0GX49 114 aa10.04□□□□□ -0.8
RABGGTA-209ENST00000559551 J3QR89 54 aa10.04□□□□□ -0.8
RABGGTA-209ENST00000559551 VCYO14598 125 aa10.04□□□□□ -0.8
RABGGTA-209ENST00000559551 SPART-AS1P0CW21 52 aa10.04□□□□□ -0.8
RABGGTA-209ENST00000559551 TCTAP57738 103 aa10.04□□□□□ -0.8
RABGGTA-209ENST00000559551 LAGE3Q14657 143 aa10.04□□□□□ -0.8
RABGGTA-209ENST00000559551 ODF1Q14990 250 aa10.04□□□□□ -0.8
RABGGTA-209ENST00000559551 C12orf74Q32Q52 190 aa10.04□□□□□ -0.8
RABGGTA-209ENST00000559551 A0A0J9YWU9 116 aa10.03□□□□□ -0.8
RABGGTA-209ENST00000559551 IGKCP01834 107 aa10.03□□□□□ -0.8
RABGGTA-209ENST00000559551 DAD1P61803 113 aa10.03□□□□□ -0.8
RABGGTA-209ENST00000559551 RPL24P83731 157 aaKnown RBP10.03□□□□□ -0.8
RABGGTA-209ENST00000559551 ZNRF2Q8NHG8 242 aa10.03□□□□□ -0.8
RABGGTA-209ENST00000559551 TM2D2Q9BX73 214 aa10.03□□□□□ -0.8
RABGGTA-209ENST00000559551 IGHV3-38A0A0C4DH36 116 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms