RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 TIMM17AQ99595 171 aa12.86□□□□□ -0.35
PTPN21-208ENST00000556564 NANOS2P60321 138 aaKnown RBP12.86□□□□□ -0.35
PTPN21-208ENST00000556564 RETNQ9HD89 108 aa12.85□□□□□ -0.35
PTPN21-208ENST00000556564 LINC00467Q9BRT7 94 aa12.85□□□□□ -0.35
PTPN21-208ENST00000556564 CRIP1P50238 77 aa12.84□□□□□ -0.35
PTPN21-208ENST00000556564 C16orf95Q9H693 158 aa12.84□□□□□ -0.35
PTPN21-208ENST00000556564 MUSTN1Q8IVN3 82 aa12.84□□□□□ -0.35
PTPN21-208ENST00000556564 IGLC6P0CF74 106 aa12.83□□□□□ -0.36
PTPN21-208ENST00000556564 C14orf177Q52M58 125 aa12.83□□□□□ -0.36
PTPN21-208ENST00000556564 TINCRA0A1B0GVN0 87 aa12.83□□□□□ -0.36
PTPN21-208ENST00000556564 DCANP1Q8TF63 244 aa12.83□□□□□ -0.36
PTPN21-208ENST00000556564 CENPFP49454 3210 aa12.83□□□□□ -0.36
PTPN21-208ENST00000556564 WDR87Q6ZQQ6 2873 aa12.83□□□□□ -0.36
PTPN21-208ENST00000556564 C9orf118A6NHY6 69 aa12.82□□□□□ -0.36
PTPN21-208ENST00000556564 RBMY1FQ15415 496 aaKnown RBP12.82□□□□□ -0.36
PTPN21-208ENST00000556564 ATRXP46100 2492 aa12.82□□□□□ -0.36
PTPN21-208ENST00000556564 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.82□□□□□ -0.36
PTPN21-208ENST00000556564 CARD19Q96LW7 228 aa12.82□□□□□ -0.36
PTPN21-208ENST00000556564 HCFC1P51610 2035 aa12.82□□□□□ -0.36
PTPN21-208ENST00000556564 CHCHD10Q8WYQ3 142 aaPredicted RBP12.82□□□□□ -0.36
PTPN21-208ENST00000556564 COX11Q9Y6N1 276 aa12.82□□□□□ -0.36
PTPN21-208ENST00000556564 TRAV12-1A0A0B4J245 112 aa12.82□□□□□ -0.36
PTPN21-208ENST00000556564 C11orf86A6NJI1 115 aa12.82□□□□□ -0.36
PTPN21-208ENST00000556564 RS1O15537 224 aa12.82□□□□□ -0.36
PTPN21-208ENST00000556564 PRR9Q5T870 116 aa12.82□□□□□ -0.36
PTPN21-208ENST00000556564 PTPRBP23467 1997 aa12.82□□□□□ -0.36
PTPN21-208ENST00000556564 CXCL5P42830 114 aa12.81□□□□□ -0.36
PTPN21-208ENST00000556564 TRBV20-1A0A075B6N2 111 aa12.81□□□□□ -0.36
PTPN21-208ENST00000556564 KIR2DL5BA0A0G2JN68 375 aa12.81□□□□□ -0.36
PTPN21-208ENST00000556564 KIR2DL5BA0A0G2JPC4 375 aa12.81□□□□□ -0.36
PTPN21-208ENST00000556564 C12orf74Q32Q52 190 aa12.81□□□□□ -0.36
PTPN21-208ENST00000556564 KIR2DL5AQ8N109 375 aa12.81□□□□□ -0.36
PTPN21-208ENST00000556564 KIR2DL5BQ8NHK3 375 aa12.81□□□□□ -0.36
PTPN21-208ENST00000556564 LOC100131303A0A0U1RQF7 123 aa12.81□□□□□ -0.36
PTPN21-208ENST00000556564 KPRPQ5T749 579 aaPredicted RBP12.81□□□□□ -0.36
PTPN21-208ENST00000556564 NAV2Q8IVL1 2488 aa12.8□□□□□ -0.36
PTPN21-208ENST00000556564 SIVA1O15304 175 aa12.8□□□□□ -0.36
PTPN21-208ENST00000556564 MLST8Q9BVC4 326 aa12.8□□□□□ -0.36
PTPN21-208ENST00000556564 ANKRD39Q53RE8 183 aa12.79□□□□□ -0.36
PTPN21-208ENST00000556564 WNK1Q9H4A3 2382 aa12.79□□□□□ -0.36
PTPN21-208ENST00000556564 LINC01545Q5VT33 79 aa12.79□□□□□ -0.36
PTPN21-208ENST00000556564 CLUHP3Q96NS8 147 aa12.79□□□□□ -0.36
PTPN21-208ENST00000556564 CFC1BP0CG36 223 aa12.78□□□□□ -0.36
PTPN21-208ENST00000556564 CFC1P0CG37 223 aa12.78□□□□□ -0.36
PTPN21-208ENST00000556564 LECT2O14960 151 aa12.78□□□□□ -0.36
PTPN21-208ENST00000556564 TRBV6-8A0A0A6YYG3 113 aa12.78□□□□□ -0.36
PTPN21-208ENST00000556564 HAMPP81172 84 aa12.78□□□□□ -0.36
PTPN21-208ENST00000556564 MRPL52Q86TS9 123 aaKnown RBP12.78□□□□□ -0.36
PTPN21-208ENST00000556564 TTTY13Q9BZ97 58 aa12.78□□□□□ -0.36
PTPN21-208ENST00000556564 TRBV6-4A0A1B0GX49 114 aa12.77□□□□□ -0.36
PTPN21-208ENST00000556564 MIR7-3HGQ8N6C7 128 aa12.77□□□□□ -0.36
PTPN21-208ENST00000556564 SIGMAR1Q99720 223 aa12.77□□□□□ -0.36
PTPN21-208ENST00000556564 INAFM2P0DMQ5 153 aa12.77□□□□□ -0.36
PTPN21-208ENST00000556564 UBE2V1Q13404 147 aa12.77□□□□□ -0.36
PTPN21-208ENST00000556564 ORMDL1Q9P0S3 153 aa12.77□□□□□ -0.36
PTPN21-208ENST00000556564 A0A1B0GXF2 115 aa12.77□□□□□ -0.37
PTPN21-208ENST00000556564 IGHV1-58A0A0C4DH39 117 aa12.76□□□□□ -0.37
PTPN21-208ENST00000556564 IGLV2-11P01706 119 aa12.76□□□□□ -0.37
PTPN21-208ENST00000556564 hADV29S1A0JD25 119 aa12.76□□□□□ -0.37
PTPN21-208ENST00000556564 BRI3O95415 125 aa12.75□□□□□ -0.37
PTPN21-208ENST00000556564 M0QY20 66 aa12.75□□□□□ -0.37
PTPN21-208ENST00000556564 IFITM1P13164 125 aa12.75□□□□□ -0.37
PTPN21-208ENST00000556564 NFE4Q86UQ8 179 aa12.75□□□□□ -0.37
PTPN21-208ENST00000556564 DNAH12Q6ZR08 3092 aa12.75□□□□□ -0.37
PTPN21-208ENST00000556564 TNCP24821 2201 aa12.75□□□□□ -0.37
PTPN21-208ENST00000556564 DLEU1O43261 78 aa12.75□□□□□ -0.37
PTPN21-208ENST00000556564 ODF3L2Q3SX64 289 aa12.75□□□□□ -0.37
PTPN21-208ENST00000556564 Q8N976 141 aa12.75□□□□□ -0.37
PTPN21-208ENST00000556564 LRCOL1A6NCL2 159 aa12.74□□□□□ -0.37
PTPN21-208ENST00000556564 A4D1N5 150 aa12.74□□□□□ -0.37
PTPN21-208ENST00000556564 CDPF1Q6NVV7 123 aa12.74□□□□□ -0.37
PTPN21-208ENST00000556564 PLXNB1O43157 2135 aa12.74□□□□□ -0.37
PTPN21-208ENST00000556564 NDUFS5O43920 106 aa12.74□□□□□ -0.37
PTPN21-208ENST00000556564 IGLV1-51P01701 117 aa12.74□□□□□ -0.37
PTPN21-208ENST00000556564 A0A1W2PPM0 123 aa12.74□□□□□ -0.37
PTPN21-208ENST00000556564 ANAPC13Q9BS18 74 aa12.74□□□□□ -0.37
PTPN21-208ENST00000556564 CCDC168Q8NDH2 2452 aa12.74□□□□□ -0.37
PTPN21-208ENST00000556564 ODF1Q14990 250 aa12.73□□□□□ -0.37
PTPN21-208ENST00000556564 RNASE3P12724 160 aaKnown RBP12.73□□□□□ -0.37
PTPN21-208ENST00000556564 UBL5Q9BZL1 73 aa12.73□□□□□ -0.37
PTPN21-208ENST00000556564 BAALC-AS2P0C853 105 aa12.73□□□□□ -0.37
PTPN21-208ENST00000556564 H3BMG7 143 aa12.73□□□□□ -0.37
PTPN21-208ENST00000556564 H7C423 109 aa12.73□□□□□ -0.37
PTPN21-208ENST00000556564 E9PLD3 99 aa12.72□□□□□ -0.37
PTPN21-208ENST00000556564 CRIP2P52943 208 aaPredicted RBP12.72□□□□□ -0.37
PTPN21-208ENST00000556564 C9orf153Q5TBE3 101 aa12.72□□□□□ -0.37
PTPN21-208ENST00000556564 C11orf21Q9P2W6 132 aa12.72□□□□□ -0.37
PTPN21-208ENST00000556564 KLLNB2CW77 178 aa12.72□□□□□ -0.37
PTPN21-208ENST00000556564 C4orf48Q5BLP8 95 aa12.71□□□□□ -0.37
PTPN21-208ENST00000556564 TDRG1Q3Y452 100 aa12.7□□□□□ -0.38
PTPN21-208ENST00000556564 DIRC1Q969H9 104 aa12.69□□□□□ -0.38
PTPN21-208ENST00000556564 K7EP34 96 aa12.69□□□□□ -0.38
PTPN21-208ENST00000556564 RNF185Q96GF1 192 aa12.69□□□□□ -0.38
PTPN21-208ENST00000556564 B9D2Q9BPU9 175 aa12.68□□□□□ -0.38
PTPN21-208ENST00000556564 SONP18583 2426 aaKnown RBP12.68□□□□□ -0.38
PTPN21-208ENST00000556564 Q6ZVH6 145 aa12.68□□□□□ -0.38
PTPN21-208ENST00000556564 CRYBA4P53673 196 aa12.68□□□□□ -0.38
PTPN21-208ENST00000556564 NAV3Q8IVL0 2385 aa12.68□□□□□ -0.38
PTPN21-208ENST00000556564 COA6Q5JTJ3 125 aaKnown RBP12.68□□□□□ -0.38
PTPN21-208ENST00000556564 FAM19A5Q7Z5A7 132 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms