RNA–Protein interactions for RNA: ENST00000556309.5

SUPT16H-206, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 3

Gene SUPT16H, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-206ENST00000556309 IGLC3P0DOY3 106 aa0.46□□□□□ -2.34
SUPT16H-206ENST00000556309 MIFP14174 115 aa0.46□□□□□ -2.34
SUPT16H-206ENST00000556309 RNASE4P34096 147 aaKnown RBP0.46□□□□□ -2.34
SUPT16H-206ENST00000556309 KLKP1Q107X0 134 aa0.46□□□□□ -2.34
SUPT16H-206ENST00000556309 PLGLAQ15195 96 aa0.46□□□□□ -2.34
SUPT16H-206ENST00000556309 ATXN8Q156A1 80 aa0.46□□□□□ -2.34
SUPT16H-206ENST00000556309 SPRNQ5BIV9 151 aa0.46□□□□□ -2.34
SUPT16H-206ENST00000556309 C9orf116Q5BN46 136 aaPredicted RBP0.46□□□□□ -2.34
SUPT16H-206ENST00000556309 BVES-AS1Q5T3Y7 98 aa0.46□□□□□ -2.34
SUPT16H-206ENST00000556309 C10orf113Q5VZT2 155 aa0.46□□□□□ -2.34
SUPT16H-206ENST00000556309 BAGE3Q86Y29 109 aa0.46□□□□□ -2.34
SUPT16H-206ENST00000556309 BAGE2Q86Y30 109 aa0.46□□□□□ -2.34
SUPT16H-206ENST00000556309 ARL17AQ8IVW1 177 aa0.46□□□□□ -2.34
SUPT16H-206ENST00000556309 Q8IYB0 196 aa0.46□□□□□ -2.34
SUPT16H-206ENST00000556309 CLECL1Q8IZS7 167 aa0.46□□□□□ -2.34
SUPT16H-206ENST00000556309 LINC00269Q8N2A0 174 aa0.46□□□□□ -2.34
SUPT16H-206ENST00000556309 WFDC5Q8TCV5 224 aa0.46□□□□□ -2.34
SUPT16H-206ENST00000556309 SMIM4Q8WVI0 70 aa0.46□□□□□ -2.34
SUPT16H-206ENST00000556309 IFI27L1Q96BM0 104 aa0.46□□□□□ -2.34
SUPT16H-206ENST00000556309 PRR15LQ9BU68 103 aa0.46□□□□□ -2.34
SUPT16H-206ENST00000556309 DPH3P1Q9H4G8 78 aa0.46□□□□□ -2.34
SUPT16H-206ENST00000556309 HIGD1BQ9P298 99 aa0.46□□□□□ -2.34
SUPT16H-206ENST00000556309 TP73-AS1Q9UF72 201 aa0.46□□□□□ -2.34
SUPT16H-206ENST00000556309 KLK9Q9UKQ9 250 aa0.46□□□□□ -2.34
SUPT16H-206ENST00000556309 LENEPQ9Y5L5 61 aa0.46□□□□□ -2.34
SUPT16H-206ENST00000556309 LINC00312Q9Y6C7 94 aa0.46□□□□□ -2.34
SUPT16H-206ENST00000556309 R4GMQ9 66 aa0.46□□□□□ -2.34
SUPT16H-206ENST00000556309 PRDM15P57071 1507 aaPredicted RBP0.46□□□□□ -2.34
SUPT16H-206ENST00000556309 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.46□□□□□ -2.34
SUPT16H-206ENST00000556309 AKAP12Q02952 1782 aa0.46□□□□□ -2.34
SUPT16H-206ENST00000556309 NWD2Q9ULI1 1742 aa0.46□□□□□ -2.34
SUPT16H-206ENST00000556309 MARF1Q9Y4F3 1742 aaKnown RBP0.46□□□□□ -2.34
SUPT16H-206ENST00000556309 PRXQ9BXM0 1461 aa0.46□□□□□ -2.34
SUPT16H-206ENST00000556309 MLH3Q9UHC1 1453 aa0.46□□□□□ -2.34
SUPT16H-206ENST00000556309 EDC4Q6P2E9 1401 aaKnown RBP0.46□□□□□ -2.34
SUPT16H-206ENST00000556309 TMEM131LA2VDJ0 1609 aa0.46□□□□□ -2.34
SUPT16H-206ENST00000556309 MROH1Q8NDA8 1641 aa0.46□□□□□ -2.34
SUPT16H-206ENST00000556309 KIF20BQ96Q89 1820 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 ADGRB1O14514 1584 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 ADGRB2O60241 1585 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 PLXNC1O60486 1568 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 ADAMTS12P58397 1594 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 HECW2Q9P2P5 1572 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 DIP2CQ9Y2E4 1556 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 LAMC3Q9Y6N6 1575 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 UBR2Q8IWV8 1755 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 SCN11AQ9UI33 1791 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 LMTK2Q8IWU2 1503 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 KIAA0586Q9BVV6 1533 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 SPHKAPQ2M3C7 1700 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 BCORL1Q5H9F3 1711 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 ANKRD26Q9UPS8 1709 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 CEP192Q8TEP8 1941 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 TRBV25-1A0A075B6N4 114 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 TRAV12-1A0A0B4J245 112 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 TRAV12-3A0A0B4J271 114 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 MYMXA0A1B0GTQ4 84 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 TMEM14DPA8MWL7 114 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 D6R8Y8 96 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 MRPL33O75394 65 aaKnown RBP0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 LEPROTL1O95214 131 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 IGHV3-33P01772 117 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 PRH1P02810 166 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 MT-ATP8P03928 68 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 COX8AP10176 69 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 PDE6GP18545 87 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 IFI27P40305 119 aaPredicted RBP0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 FXYD6P3P58550 94 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 SSBP1Q04837 148 aaKnown RBP0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 ZNF56Q15929 161 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 C10orf128Q5T292 105 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 CFAP126Q5VTH2 177 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 PATE2Q6UY27 113 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 Q6ZQT0 140 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 VMO1Q7Z5L0 202 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 MUSTN1Q8IVN3 82 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 TOMM5Q8N4H5 51 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 Q8N6K4 173 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 C3orf56Q8N813 242 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 Q8N814 137 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 Q8N8P6 123 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 SPTSSBQ8NFR3 76 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 C18orf32Q8TCD1 76 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 LINC01600Q96MT4 127 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 DSCR8Q96T75 97 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 CDC42SE1Q9NRR8 79 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 TMEM14CQ9P0S9 112 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 NDUFA12Q9UI09 145 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 CLTCQ00610 1675 aaKnown RBP0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 ZNF106Q9H2Y7 1883 aaKnown RBP0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 ANKRD50Q9ULJ7 1429 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 LRRC37A3O60309 1634 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 PREX2Q70Z35 1606 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 ABCA9Q8IUA7 1624 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 MYO3AQ8NEV4 1616 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 RNF17Q9BXT8 1623 aaKnown RBP0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 N4BP2Q86UW6 1770 aaPredicted RBP0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 MAST1Q9Y2H9 1570 aa0.45□□□□□ -2.34
SUPT16H-206ENST00000556309 TOP2AP11388 1531 aaKnown RBP0.44□□□□□ -2.34
SUPT16H-206ENST00000556309 ZMYM4Q5VZL5 1548 aa0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms