RNA–Protein interactions for RNA: ENST00000553171.1

PFDN5-219, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-219ENST00000553171 ZNF524Q96C55 264 aa3.65□□□□□ -1.83
PFDN5-219ENST00000553171 RITA1Q96K30 269 aa3.65□□□□□ -1.83
PFDN5-219ENST00000553171 SLC50A1Q9BRV3 221 aa3.65□□□□□ -1.83
PFDN5-219ENST00000553171 DEFB126Q9BYW3 111 aa3.65□□□□□ -1.83
PFDN5-219ENST00000553171 CCL28Q9NRJ3 127 aa3.65□□□□□ -1.83
PFDN5-219ENST00000553171 MED12Q93074 2177 aa3.64□□□□□ -1.83
PFDN5-219ENST00000553171 IGHV6-1A0A0B4J1U7 121 aa3.64□□□□□ -1.83
PFDN5-219ENST00000553171 A0A0J9YXV3 536 aa3.64□□□□□ -1.83
PFDN5-219ENST00000553171 LCE6AA0A183 80 aa3.64□□□□□ -1.83
PFDN5-219ENST00000553171 A0A1W2PPR1 153 aa3.64□□□□□ -1.83
PFDN5-219ENST00000553171 ADARB2-AS1A8MUL3 147 aa3.64□□□□□ -1.83
PFDN5-219ENST00000553171 C12orf77C9JDV5 145 aa3.64□□□□□ -1.83
PFDN5-219ENST00000553171 BUB1B-PAK6H3BSN5 160 aa3.64□□□□□ -1.83
PFDN5-219ENST00000553171 H3BVH4 76 aa3.64□□□□□ -1.83
PFDN5-219ENST00000553171 FUSP35637 526 aaKnown RBP eCLIP3.64□□□□□ -1.83
PFDN5-219ENST00000553171 RBM3P98179 157 aaKnown RBP3.64□□□□□ -1.83
PFDN5-219ENST00000553171 CIRBPQ14011 172 aaKnown RBP3.64□□□□□ -1.83
PFDN5-219ENST00000553171 PIGYQ3MUY2 71 aa3.64□□□□□ -1.83
PFDN5-219ENST00000553171 MORN5Q5VZ52 161 aa3.64□□□□□ -1.83
PFDN5-219ENST00000553171 ATP11AUNQ6ZP68 121 aa3.64□□□□□ -1.83
PFDN5-219ENST00000553171 MDP1Q86V88 176 aa3.64□□□□□ -1.83
PFDN5-219ENST00000553171 ZNF714Q96N38 554 aa3.64□□□□□ -1.83
PFDN5-219ENST00000553171 NPCDR1Q9BY65 106 aa3.64□□□□□ -1.83
PFDN5-219ENST00000553171 CYSTM1Q9H1C7 97 aa3.64□□□□□ -1.83
PFDN5-219ENST00000553171 MED12LQ86YW9 2145 aa3.64□□□□□ -1.83
PFDN5-219ENST00000553171 IGKV1-27A0A075B6S5 117 aa3.63□□□□□ -1.83
PFDN5-219ENST00000553171 A0A0B4J2C4 111 aa3.63□□□□□ -1.83
PFDN5-219ENST00000553171 IGKV1-12A0A0C4DH73 117 aa3.63□□□□□ -1.83
PFDN5-219ENST00000553171 LOC107984156A0A0G2JMH3 177 aa3.63□□□□□ -1.83
PFDN5-219ENST00000553171 TRBV10-2A0A0K0K1G8 114 aa3.63□□□□□ -1.83
PFDN5-219ENST00000553171 C17orf51A8MQB3 221 aa3.63□□□□□ -1.83
PFDN5-219ENST00000553171 COX7A2P2O60397 106 aa3.63□□□□□ -1.83
PFDN5-219ENST00000553171 IGKV1D-12P01611 117 aa3.63□□□□□ -1.83
PFDN5-219ENST00000553171 P0C879 139 aa3.63□□□□□ -1.83
PFDN5-219ENST00000553171 INAFM2P0DMQ5 153 aa3.63□□□□□ -1.83
PFDN5-219ENST00000553171 BLCAPP62952 87 aa3.63□□□□□ -1.83
PFDN5-219ENST00000553171 FHL2Q14192 279 aa3.63□□□□□ -1.83
PFDN5-219ENST00000553171 RBMY1FQ15415 496 aaKnown RBP3.63□□□□□ -1.83
PFDN5-219ENST00000553171 ATXN8Q156A1 80 aa3.63□□□□□ -1.83
PFDN5-219ENST00000553171 Q6ZRM9 215 aa3.63□□□□□ -1.83
PFDN5-219ENST00000553171 PRNTQ86SH4 94 aa3.63□□□□□ -1.83
PFDN5-219ENST00000553171 NDUFA11Q86Y39 141 aa3.63□□□□□ -1.83
PFDN5-219ENST00000553171 ARL17AQ8IVW1 177 aa3.63□□□□□ -1.83
PFDN5-219ENST00000553171 RNASE6Q93091 150 aaKnown RBP3.63□□□□□ -1.83
PFDN5-219ENST00000553171 KRTAP9-8Q9BYQ0 159 aa3.63□□□□□ -1.83
PFDN5-219ENST00000553171 MRPL35Q9NZE8 188 aaKnown RBP3.63□□□□□ -1.83
PFDN5-219ENST00000553171 XCL2Q9UBD3 114 aa3.63□□□□□ -1.83
PFDN5-219ENST00000553171 ALPK2Q86TB3 2170 aa3.62□□□□□ -1.83
PFDN5-219ENST00000553171 TRBV25-1A0A075B6N4 114 aa3.62□□□□□ -1.83
PFDN5-219ENST00000553171 IGKV3D-15A0A087WSY6 115 aa3.62□□□□□ -1.83
PFDN5-219ENST00000553171 TRAV13-2A0A0B4J235 113 aa3.62□□□□□ -1.83
PFDN5-219ENST00000553171 IGHV1-69DA0A0B4J2H0 117 aa3.62□□□□□ -1.83
PFDN5-219ENST00000553171 TMEM30CPA0ZSE6 113 aa3.62□□□□□ -1.83
PFDN5-219ENST00000553171 PMS2P5A8MQ11 134 aa3.62□□□□□ -1.83
PFDN5-219ENST00000553171 CDK2AP2O75956 126 aa3.62□□□□□ -1.83
PFDN5-219ENST00000553171 MGST1P10620 155 aaKnown RBP3.62□□□□□ -1.83
PFDN5-219ENST00000553171 ZNF32P17041 273 aa3.62□□□□□ -1.83
PFDN5-219ENST00000553171 LINC00205P59089 165 aa3.62□□□□□ -1.83
PFDN5-219ENST00000553171 LMO4P61968 165 aa3.62□□□□□ -1.83
PFDN5-219ENST00000553171 GNB1P62873 340 aa3.62□□□□□ -1.83
PFDN5-219ENST00000553171 KLKP1Q107X0 134 aa3.62□□□□□ -1.83
PFDN5-219ENST00000553171 RHOHQ15669 191 aa3.62□□□□□ -1.83
PFDN5-219ENST00000553171 TWIST1Q15672 202 aa3.62□□□□□ -1.83
PFDN5-219ENST00000553171 Q1T7F1 81 aa3.62□□□□□ -1.83
PFDN5-219ENST00000553171 LINC01554Q52M75 96 aa3.62□□□□□ -1.83
PFDN5-219ENST00000553171 C11orf71Q6IPW1 123 aa3.62□□□□□ -1.83
PFDN5-219ENST00000553171 ZNF497Q6ZNH5 498 aa3.62□□□□□ -1.83
PFDN5-219ENST00000553171 GPHB5Q86YW7 130 aa3.62□□□□□ -1.83
PFDN5-219ENST00000553171 HIST1H4GQ99525 98 aa3.62□□□□□ -1.83
PFDN5-219ENST00000553171 PHF3Q92576 2039 aaKnown RBP3.61□□□□□ -1.83
PFDN5-219ENST00000553171 TRBV7-3A0A075B6L6 115 aa3.61□□□□□ -1.83
PFDN5-219ENST00000553171 TMSB15BA0A087X1C1 80 aa3.61□□□□□ -1.83
PFDN5-219ENST00000553171 SMIM27A0A1W2PRY6 76 aa3.61□□□□□ -1.83
PFDN5-219ENST00000553171 E7EQL1 145 aa3.61□□□□□ -1.83
PFDN5-219ENST00000553171 C16orf97H3BN30 126 aa3.61□□□□□ -1.83
PFDN5-219ENST00000553171 C3orf84H3BNL1 204 aa3.61□□□□□ -1.83
PFDN5-219ENST00000553171 H7BZZ5 65 aa3.61□□□□□ -1.83
PFDN5-219ENST00000553171 PEX7O00628 323 aa3.61□□□□□ -1.83
PFDN5-219ENST00000553171 LTAP01374 205 aa3.61□□□□□ -1.83
PFDN5-219ENST00000553171 PRM2P04554 102 aa3.61□□□□□ -1.83
PFDN5-219ENST00000553171 IAPPP10997 89 aa3.61□□□□□ -1.83
PFDN5-219ENST00000553171 RNASE4P34096 147 aaKnown RBP3.61□□□□□ -1.83
PFDN5-219ENST00000553171 XCL1P47992 114 aa3.61□□□□□ -1.83
PFDN5-219ENST00000553171 UBE2D1P51668 147 aa3.61□□□□□ -1.83
PFDN5-219ENST00000553171 DYNLRB2Q8TF09 96 aa3.61□□□□□ -1.83
PFDN5-219ENST00000553171 GFRA4Q9GZZ7 299 aa3.61□□□□□ -1.83
PFDN5-219ENST00000553171 EXPH5Q8NEV8 1989 aa3.61□□□□□ -1.83
PFDN5-219ENST00000553171 PLCE1Q9P212 2302 aa3.6□□□□□ -1.83
PFDN5-219ENST00000553171 DSCAMO60469 2012 aa3.6□□□□□ -1.83
PFDN5-219ENST00000553171 PCNX3Q9H6A9 2034 aa3.6□□□□□ -1.83
PFDN5-219ENST00000553171 TRBV7-1A0A0A6YYK4 115 aa3.6□□□□□ -1.83
PFDN5-219ENST00000553171 IGKV1-6A0A0C4DH72 117 aa3.6□□□□□ -1.83
PFDN5-219ENST00000553171 A0A0G2JRQ6 117 aa3.6□□□□□ -1.83
PFDN5-219ENST00000553171 PLXNB1O43157 2135 aa3.6□□□□□ -1.83
PFDN5-219ENST00000553171 MRPL33O75394 65 aaKnown RBP3.6□□□□□ -1.83
PFDN5-219ENST00000553171 IGKV1D-33P01593 117 aa3.6□□□□□ -1.83
PFDN5-219ENST00000553171 IGKV1-33P01594 117 aa3.6□□□□□ -1.83
PFDN5-219ENST00000553171 IGKV1-39P01597 117 aa3.6□□□□□ -1.83
PFDN5-219ENST00000553171 IGKV1D-39P04432 117 aa3.6□□□□□ -1.83
PFDN5-219ENST00000553171 IFI27P40305 119 aaPredicted RBP3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms