RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 DEFA6Q01524 100 aa13.96□□□□□ -0.17
SSH1-209ENST00000551165 DNAJC30Q96LL9 226 aa13.96□□□□□ -0.17
SSH1-209ENST00000551165 HHLA3Q9XRX5 114 aa13.96□□□□□ -0.17
SSH1-209ENST00000551165 HSBP1L1C9JCN9 74 aa13.96□□□□□ -0.18
SSH1-209ENST00000551165 NOTCH1P46531 2555 aa13.95□□□□□ -0.18
SSH1-209ENST00000551165 GAGE12JA6NER3 117 aa13.95□□□□□ -0.18
SSH1-209ENST00000551165 SMIM9A6NGZ8 99 aa13.95□□□□□ -0.18
SSH1-209ENST00000551165 PRSS29PA6NIE9 313 aa13.95□□□□□ -0.18
SSH1-209ENST00000551165 GAGE1Q13065 139 aa13.95□□□□□ -0.18
SSH1-209ENST00000551165 GAGE4Q13068 117 aa13.95□□□□□ -0.18
SSH1-209ENST00000551165 GAGE5Q13069 117 aa13.95□□□□□ -0.18
SSH1-209ENST00000551165 FHL2Q14192 279 aa13.95□□□□□ -0.18
SSH1-209ENST00000551165 GAGE13Q4V321 117 aa13.95□□□□□ -0.18
SSH1-209ENST00000551165 IGHV4-28A0A0C4DH34 117 aa13.95□□□□□ -0.18
SSH1-209ENST00000551165 IGKCP01834 107 aa13.95□□□□□ -0.18
SSH1-209ENST00000551165 CEMP1Q6PRD7 247 aaPredicted RBP13.95□□□□□ -0.18
SSH1-209ENST00000551165 CHCHD7Q9BUK0 85 aa13.95□□□□□ -0.18
SSH1-209ENST00000551165 UQCR10Q9UDW1 63 aa13.95□□□□□ -0.18
SSH1-209ENST00000551165 TRBV7-3A0A075B6L6 115 aa13.94□□□□□ -0.18
SSH1-209ENST00000551165 FAM222AQ5U5X8 452 aa13.94□□□□□ -0.18
SSH1-209ENST00000551165 LINC00612Q8N6U2 182 aa13.94□□□□□ -0.18
SSH1-209ENST00000551165 TRAV12-1A0A0B4J245 112 aa13.94□□□□□ -0.18
SSH1-209ENST00000551165 TRGV4A0A0C4DH28 118 aa13.94□□□□□ -0.18
SSH1-209ENST00000551165 DPM2O94777 84 aa13.93□□□□□ -0.18
SSH1-209ENST00000551165 DNAH3Q8TD57 4116 aa13.93□□□□□ -0.18
SSH1-209ENST00000551165 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.93□□□□□ -0.18
SSH1-209ENST00000551165 IGKV2-29A2NJV5 120 aaPredicted RBP13.93□□□□□ -0.18
SSH1-209ENST00000551165 G0S2P27469 103 aa13.93□□□□□ -0.18
SSH1-209ENST00000551165 CHTOPQ9Y3Y2 248 aaKnown RBP13.93□□□□□ -0.18
SSH1-209ENST00000551165 Q8NAQ8 132 aa13.92□□□□□ -0.18
SSH1-209ENST00000551165 FAM104AQ969W3 186 aa13.92□□□□□ -0.18
SSH1-209ENST00000551165 RNF183Q96D59 192 aa13.92□□□□□ -0.18
SSH1-209ENST00000551165 TIMM17AQ99595 171 aa13.92□□□□□ -0.18
SSH1-209ENST00000551165 TRBV10-1A0A0K0K1A3 114 aa13.91□□□□□ -0.18
SSH1-209ENST00000551165 F8VRH5 84 aa13.91□□□□□ -0.18
SSH1-209ENST00000551165 RPL36AP83881 106 aaKnown RBP13.91□□□□□ -0.18
SSH1-209ENST00000551165 RPL36ALQ969Q0 106 aaKnown RBP13.91□□□□□ -0.18
SSH1-209ENST00000551165 IGKV2D-26A0A0A0MRZ7 120 aa13.9□□□□□ -0.18
SSH1-209ENST00000551165 UBE2D3P61077 147 aa13.9□□□□□ -0.18
SSH1-209ENST00000551165 UBE2D2P62837 147 aa13.9□□□□□ -0.18
SSH1-209ENST00000551165 COTL1Q14019 142 aa13.9□□□□□ -0.18
SSH1-209ENST00000551165 NTM-AS1Q6ZSK4 140 aa13.9□□□□□ -0.18
SSH1-209ENST00000551165 TMEM141Q96I45 108 aa13.9□□□□□ -0.18
SSH1-209ENST00000551165 MDFIQ99750 246 aa13.9□□□□□ -0.18
SSH1-209ENST00000551165 RETNQ9HD89 108 aa13.9□□□□□ -0.18
SSH1-209ENST00000551165 CELA1Q9UNI1 258 aa13.9□□□□□ -0.18
SSH1-209ENST00000551165 CST9LQ9H4G1 147 aa13.9□□□□□ -0.18
SSH1-209ENST00000551165 TRBV6-4A0A1B0GX49 114 aa13.89□□□□□ -0.19
SSH1-209ENST00000551165 NBEAL1Q6ZS30 2694 aa13.88□□□□□ -0.19
SSH1-209ENST00000551165 IGLV4-3A0A075B6K6 122 aa13.88□□□□□ -0.19
SSH1-209ENST00000551165 EREGO14944 169 aa13.88□□□□□ -0.19
SSH1-209ENST00000551165 PRB2P02812 416 aaPredicted RBP13.88□□□□□ -0.19
SSH1-209ENST00000551165 PMVKQ15126 192 aa13.88□□□□□ -0.19
SSH1-209ENST00000551165 RNASE13Q5GAN3 156 aaKnown RBP13.88□□□□□ -0.19
SSH1-209ENST00000551165 TTTY13Q9BZ97 58 aa13.88□□□□□ -0.19
SSH1-209ENST00000551165 IGLV4-69A0A075B6H9 119 aa13.88□□□□□ -0.19
SSH1-209ENST00000551165 LINC01549A6NIU2 74 aa13.87□□□□□ -0.19
SSH1-209ENST00000551165 HNRNPA3P51991 378 aaKnown RBP13.87□□□□□ -0.19
SSH1-209ENST00000551165 PCP2Q8IVA1 136 aa13.87□□□□□ -0.19
SSH1-209ENST00000551165 SNHG12Q9BXW3 62 aa13.87□□□□□ -0.19
SSH1-209ENST00000551165 COX8AP10176 69 aa13.87□□□□□ -0.19
SSH1-209ENST00000551165 NMUP48645 174 aa13.87□□□□□ -0.19
SSH1-209ENST00000551165 FGF6P10767 208 aa13.86□□□□□ -0.19
SSH1-209ENST00000551165 MIFP14174 115 aa13.86□□□□□ -0.19
SSH1-209ENST00000551165 PLNP26678 52 aa13.86□□□□□ -0.19
SSH1-209ENST00000551165 SAMD5Q5TGI4 173 aa13.86□□□□□ -0.19
SSH1-209ENST00000551165 SLC25A34Q6PIV7 304 aa13.86□□□□□ -0.19
SSH1-209ENST00000551165 UBE2D4Q9Y2X8 147 aa13.86□□□□□ -0.19
SSH1-209ENST00000551165 LYRM9A8MSI8 78 aa13.86□□□□□ -0.19
SSH1-209ENST00000551165 CIDEAO60543 219 aa13.86□□□□□ -0.19
SSH1-209ENST00000551165 C11orf86A6NJI1 115 aa13.85□□□□□ -0.19
SSH1-209ENST00000551165 LINC00694P0DN24 101 aa13.85□□□□□ -0.19
SSH1-209ENST00000551165 DAZ4Q86SG3 579 aaKnown RBP13.85□□□□□ -0.19
SSH1-209ENST00000551165 DAZ3Q9NR90 486 aaKnown RBP13.85□□□□□ -0.19
SSH1-209ENST00000551165 A8MZ25 164 aa13.84□□□□□ -0.19
SSH1-209ENST00000551165 PYGO1Q9Y3Y4 419 aa13.84□□□□□ -0.19
SSH1-209ENST00000551165 TENM3Q9P273 2699 aa13.83□□□□□ -0.2
SSH1-209ENST00000551165 CRYBA4P53673 196 aa13.82□□□□□ -0.2
SSH1-209ENST00000551165 PRADC1Q9BSG0 188 aa13.82□□□□□ -0.2
SSH1-209ENST00000551165 Q6ZUT4 128 aa13.82□□□□□ -0.2
SSH1-209ENST00000551165 VCX2Q9H322 139 aa13.82□□□□□ -0.2
SSH1-209ENST00000551165 DAD1P61803 113 aa13.81□□□□□ -0.2
SSH1-209ENST00000551165 C2orf91Q6ZV80 131 aa13.81□□□□□ -0.2
SSH1-209ENST00000551165 BOD1L2Q8IYS8 172 aa13.81□□□□□ -0.2
SSH1-209ENST00000551165 MGAM2Q2M2H8 2515 aa13.81□□□□□ -0.2
SSH1-209ENST00000551165 GYPEP15421 78 aa13.8□□□□□ -0.2
SSH1-209ENST00000551165 AMELXQ99217 191 aa13.8□□□□□ -0.2
SSH1-209ENST00000551165 A0A0J9YXV3 536 aa13.8□□□□□ -0.2
SSH1-209ENST00000551165 BATFQ16520 125 aa13.8□□□□□ -0.2
SSH1-209ENST00000551165 SBSPONQ8IVN8 264 aa13.8□□□□□ -0.2
SSH1-209ENST00000551165 MRPS16Q9Y3D3 137 aaKnown RBP13.8□□□□□ -0.2
SSH1-209ENST00000551165 A0A0J9YY99 117 aa13.79□□□□□ -0.2
SSH1-209ENST00000551165 M0R143 59 aa13.79□□□□□ -0.2
SSH1-209ENST00000551165 MAPKAPK5-AS1Q8N8E1 139 aa13.79□□□□□ -0.2
SSH1-209ENST00000551165 SPANXA1Q9NS26 97 aa13.79□□□□□ -0.2
SSH1-209ENST00000551165 PRO0255Q9UI72 69 aa13.79□□□□□ -0.2
SSH1-209ENST00000551165 A0A096LPF7 62 aa13.78□□□□□ -0.2
SSH1-209ENST00000551165 VSIG2Q96IQ7 327 aa13.78□□□□□ -0.2
SSH1-209ENST00000551165 SPART-AS1P0CW21 52 aa13.78□□□□□ -0.2
SSH1-209ENST00000551165 TRAV8-6A0A0B4J262 113 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms