RNA–Protein interactions for RNA: ENST00000542866.2

KDM3B-209, Transcript of lysine demethylase 3B, humanhuman

TSL 2 BASIC

Gene KDM3B, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-209ENST00000542866 ZNF56Q15929 161 aa3.98□□□□□ -1.77
KDM3B-209ENST00000542866 LINC01620Q4KN68 170 aa3.98□□□□□ -1.77
KDM3B-209ENST00000542866 LENEPQ9Y5L5 61 aa3.98□□□□□ -1.77
KDM3B-209ENST00000542866 CENPVL3A0A0U1RRI6 287 aa3.97□□□□□ -1.77
KDM3B-209ENST00000542866 IGKV3-20P01619 116 aa3.97□□□□□ -1.77
KDM3B-209ENST00000542866 TRBV12-3P01733 135 aa3.97□□□□□ -1.77
KDM3B-209ENST00000542866 TMEM263Q8WUH6 116 aaKnown RBP3.97□□□□□ -1.77
KDM3B-209ENST00000542866 TRAV12-3A0A0B4J271 114 aa3.97□□□□□ -1.77
KDM3B-209ENST00000542866 IGHV1-69P01742 117 aa3.97□□□□□ -1.77
KDM3B-209ENST00000542866 POLR2KP53803 58 aaKnown RBP3.97□□□□□ -1.77
KDM3B-209ENST00000542866 ZNF876PQ49A33 203 aa3.97□□□□□ -1.77
KDM3B-209ENST00000542866 C2orf82Q6UX34 121 aa3.97□□□□□ -1.77
KDM3B-209ENST00000542866 ZNF580Q9UK33 172 aa3.97□□□□□ -1.77
KDM3B-209ENST00000542866 A0A0J9YXV3 536 aa3.97□□□□□ -1.77
KDM3B-209ENST00000542866 EIF4EBP3O60516 100 aaPredicted RBP3.97□□□□□ -1.77
KDM3B-209ENST00000542866 C3orf56Q8N813 242 aa3.97□□□□□ -1.77
KDM3B-209ENST00000542866 KIR2DL5BQ8NHK3 375 aa3.97□□□□□ -1.77
KDM3B-209ENST00000542866 TIMM17AQ99595 171 aa3.97□□□□□ -1.77
KDM3B-209ENST00000542866 U3KQE9 123 aa3.97□□□□□ -1.77
KDM3B-209ENST00000542866 LRBAP50851 2863 aa3.97□□□□□ -1.77
KDM3B-209ENST00000542866 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.96□□□□□ -1.77
KDM3B-209ENST00000542866 H3BMM0 161 aa3.96□□□□□ -1.77
KDM3B-209ENST00000542866 LEPROTO15243 131 aa3.96□□□□□ -1.77
KDM3B-209ENST00000542866 UBE2WQ96B02 151 aa3.96□□□□□ -1.77
KDM3B-209ENST00000542866 TRAV41A0A0B4J266 112 aa3.96□□□□□ -1.78
KDM3B-209ENST00000542866 LOC107984640A0A0U1RRK4 108 aa3.96□□□□□ -1.78
KDM3B-209ENST00000542866 H3BUX3 64 aa3.96□□□□□ -1.78
KDM3B-209ENST00000542866 LINC00315P59091 139 aa3.96□□□□□ -1.78
KDM3B-209ENST00000542866 AMELXQ99217 191 aa3.96□□□□□ -1.78
KDM3B-209ENST00000542866 TMEM223A0PJW6 202 aa3.96□□□□□ -1.78
KDM3B-209ENST00000542866 TRIAP1O43715 76 aa3.96□□□□□ -1.78
KDM3B-209ENST00000542866 DNAJC30Q96LL9 226 aa3.96□□□□□ -1.78
KDM3B-209ENST00000542866 DUX3Q96PT4 197 aa3.96□□□□□ -1.78
KDM3B-209ENST00000542866 KIF25-AS1Q9Y6Z4 181 aa3.96□□□□□ -1.78
KDM3B-209ENST00000542866 IGHV4OR15-8A0A075B7B6 117 aa3.95□□□□□ -1.78
KDM3B-209ENST00000542866 A0A087WW49 117 aa3.95□□□□□ -1.78
KDM3B-209ENST00000542866 A0A0B4J2C4 111 aa3.95□□□□□ -1.78
KDM3B-209ENST00000542866 TRBV10-2A0A0K0K1G8 114 aa3.95□□□□□ -1.78
KDM3B-209ENST00000542866 MED14OSP0DP75 135 aa3.95□□□□□ -1.78
KDM3B-209ENST00000542866 ZNF22P17026 224 aaPredicted RBP3.95□□□□□ -1.78
KDM3B-209ENST00000542866 RNASE13Q5GAN3 156 aaKnown RBP3.95□□□□□ -1.78
KDM3B-209ENST00000542866 Q6ZSV7 163 aa3.95□□□□□ -1.78
KDM3B-209ENST00000542866 MRAPQ8TCY5 172 aa3.95□□□□□ -1.78
KDM3B-209ENST00000542866 ODF3Q96PU9 254 aa3.95□□□□□ -1.78
KDM3B-209ENST00000542866 RHPN1-AS1Q9BWJ2 59 aa3.95□□□□□ -1.78
KDM3B-209ENST00000542866 MUC4Q99102 2169 aa3.95□□□□□ -1.78
KDM3B-209ENST00000542866 SVEP1Q4LDE5 3571 aa3.95□□□□□ -1.78
KDM3B-209ENST00000542866 TRAV12-2A0A075B6T6 113 aa3.95□□□□□ -1.78
KDM3B-209ENST00000542866 TRAV8-3A0A0A6YYJ7 113 aa3.95□□□□□ -1.78
KDM3B-209ENST00000542866 M0R2P5 195 aa3.95□□□□□ -1.78
KDM3B-209ENST00000542866 COX6CP09669 75 aa3.95□□□□□ -1.78
KDM3B-209ENST00000542866 P0DMU3 169 aa3.95□□□□□ -1.78
KDM3B-209ENST00000542866 FAM231AP0DMU4 169 aa3.95□□□□□ -1.78
KDM3B-209ENST00000542866 FAM231CP0DMU5 169 aa3.95□□□□□ -1.78
KDM3B-209ENST00000542866 IGHV4-31P0DP07 118 aa3.95□□□□□ -1.78
KDM3B-209ENST00000542866 MEIG1Q5JSS6 88 aa3.95□□□□□ -1.78
KDM3B-209ENST00000542866 FAM19A5Q7Z5A7 132 aaPredicted RBP3.95□□□□□ -1.78
KDM3B-209ENST00000542866 CLEC2BQ92478 149 aa3.95□□□□□ -1.78
KDM3B-209ENST00000542866 SIRPDQ9H106 197 aa3.95□□□□□ -1.78
KDM3B-209ENST00000542866 A0A0J9YXY3 114 aa3.95□□□□□ -1.78
KDM3B-209ENST00000542866 HTN1P15515 57 aa3.95□□□□□ -1.78
KDM3B-209ENST00000542866 MGAM2Q2M2H8 2515 aa3.95□□□□□ -1.78
KDM3B-209ENST00000542866 IGHV3-73A0A0B4J1V6 119 aa3.94□□□□□ -1.78
KDM3B-209ENST00000542866 IGHV4-38-2P0DP08 117 aa3.94□□□□□ -1.78
KDM3B-209ENST00000542866 C5orf56Q8N8D9 126 aa3.94□□□□□ -1.78
KDM3B-209ENST00000542866 CHCHD5Q9BSY4 110 aa3.94□□□□□ -1.78
KDM3B-209ENST00000542866 TIMM21Q9BVV7 248 aa3.94□□□□□ -1.78
KDM3B-209ENST00000542866 MDFICQ9P1T7 246 aa3.94□□□□□ -1.78
KDM3B-209ENST00000542866 KLK9Q9UKQ9 250 aa3.94□□□□□ -1.78
KDM3B-209ENST00000542866 TRBV27A0A0K0K1C4 114 aa3.94□□□□□ -1.78
KDM3B-209ENST00000542866 LGALS9O00182 355 aa3.94□□□□□ -1.78
KDM3B-209ENST00000542866 NDUFA4O00483 81 aa3.94□□□□□ -1.78
KDM3B-209ENST00000542866 SOCS3O14543 225 aa3.94□□□□□ -1.78
KDM3B-209ENST00000542866 RS1O15537 224 aa3.94□□□□□ -1.78
KDM3B-209ENST00000542866 IGHV3-30-3P0DP02 117 aa3.94□□□□□ -1.78
KDM3B-209ENST00000542866 CEMP1Q6PRD7 247 aaPredicted RBP3.94□□□□□ -1.78
KDM3B-209ENST00000542866 ICOSQ9Y6W8 199 aa3.94□□□□□ -1.78
KDM3B-209ENST00000542866 FAM223BA6NKX1 122 aa3.94□□□□□ -1.78
KDM3B-209ENST00000542866 H7C423 109 aa3.94□□□□□ -1.78
KDM3B-209ENST00000542866 LINC00694P0DN24 101 aa3.94□□□□□ -1.78
KDM3B-209ENST00000542866 CD28P10747 220 aa3.94□□□□□ -1.78
KDM3B-209ENST00000542866 FAM223AQ8IWN6 122 aa3.94□□□□□ -1.78
KDM3B-209ENST00000542866 TMEM126AQ9H061 195 aa3.94□□□□□ -1.78
KDM3B-209ENST00000542866 MOB4Q9Y3A3 225 aa3.94□□□□□ -1.78
KDM3B-209ENST00000542866 DCHS2Q6V1P9 2916 aa3.93□□□□□ -1.78
KDM3B-209ENST00000542866 TRBV30A0A0K0K1B3 111 aa3.93□□□□□ -1.78
KDM3B-209ENST00000542866 C20orf203Q8NBC4 194 aa3.93□□□□□ -1.78
KDM3B-209ENST00000542866 IGLV4-3A0A075B6K6 122 aa3.93□□□□□ -1.78
KDM3B-209ENST00000542866 A0A0U1RRA0 63 aa3.93□□□□□ -1.78
KDM3B-209ENST00000542866 M0QY20 66 aa3.93□□□□□ -1.78
KDM3B-209ENST00000542866 DEFB112Q30KQ8 113 aa3.93□□□□□ -1.78
KDM3B-209ENST00000542866 ADAMTSL4-AS1Q5T5F5 129 aa3.93□□□□□ -1.78
KDM3B-209ENST00000542866 Q6Q795 121 aa3.93□□□□□ -1.78
KDM3B-209ENST00000542866 POM121L12Q8N7R1 296 aa3.93□□□□□ -1.78
KDM3B-209ENST00000542866 DAND5Q8N907 189 aa3.93□□□□□ -1.78
KDM3B-209ENST00000542866 NDUFA12Q9UI09 145 aa3.93□□□□□ -1.78
KDM3B-209ENST00000542866 I3L3M4 83 aa3.93□□□□□ -1.78
KDM3B-209ENST00000542866 NXPH4O95158 308 aa3.93□□□□□ -1.78
KDM3B-209ENST00000542866 RPL13AP40429 203 aaKnown RBP3.93□□□□□ -1.78
KDM3B-209ENST00000542866 RHOHQ15669 191 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms