RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 CRIP1P50238 77 aa3.65□□□□□ -1.83
SNHG1-201ENST00000535076 TSPEAR-AS2P59090 65 aa3.65□□□□□ -1.83
SNHG1-201ENST00000535076 C2orf66Q6UXQ4 117 aa3.65□□□□□ -1.83
SNHG1-201ENST00000535076 MED12Q93074 2177 aa3.65□□□□□ -1.83
SNHG1-201ENST00000535076 MYO7BQ6PIF6 2116 aa3.64□□□□□ -1.83
SNHG1-201ENST00000535076 LCE6AA0A183 80 aa3.64□□□□□ -1.83
SNHG1-201ENST00000535076 CTSGP08311 255 aa3.64□□□□□ -1.83
SNHG1-201ENST00000535076 IGLV3-21P80748 117 aaPredicted RBP3.64□□□□□ -1.83
SNHG1-201ENST00000535076 PRCDQ00LT1 54 aa3.64□□□□□ -1.83
SNHG1-201ENST00000535076 NREPQ16612 68 aa3.64□□□□□ -1.83
SNHG1-201ENST00000535076 ATP1A1-AS1Q5TC04 95 aa3.64□□□□□ -1.83
SNHG1-201ENST00000535076 C17orf82Q86X59 251 aaPredicted RBP3.64□□□□□ -1.83
SNHG1-201ENST00000535076 C1orf64Q8NEQ6 169 aa3.64□□□□□ -1.83
SNHG1-201ENST00000535076 PRSS33Q8NF86 280 aa3.64□□□□□ -1.83
SNHG1-201ENST00000535076 ZNF702PQ9H963 129 aa3.64□□□□□ -1.83
SNHG1-201ENST00000535076 CDC42SE2Q9NRR3 84 aa3.64□□□□□ -1.83
SNHG1-201ENST00000535076 H3BQ85 93 aa3.63□□□□□ -1.83
SNHG1-201ENST00000535076 CHKB-CPT1BH3BT56 60 aa3.63□□□□□ -1.83
SNHG1-201ENST00000535076 SAA2P0DJI9 122 aaPredicted RBP3.63□□□□□ -1.83
SNHG1-201ENST00000535076 B3GALT5-AS1P59052 145 aa3.63□□□□□ -1.83
SNHG1-201ENST00000535076 C15orf32Q32M92 178 aa3.63□□□□□ -1.83
SNHG1-201ENST00000535076 INTS1Q8N201 2190 aaKnown RBP3.63□□□□□ -1.83
SNHG1-201ENST00000535076 ESPL1Q14674 2120 aa3.62□□□□□ -1.83
SNHG1-201ENST00000535076 COL4A5P29400 1685 aa3.62□□□□□ -1.83
SNHG1-201ENST00000535076 F5H697 171 aa3.62□□□□□ -1.83
SNHG1-201ENST00000535076 K7EQG2 157 aa3.62□□□□□ -1.83
SNHG1-201ENST00000535076 NDUFB1O75438 58 aa3.62□□□□□ -1.83
SNHG1-201ENST00000535076 LY6HO94772 140 aa3.62□□□□□ -1.83
SNHG1-201ENST00000535076 IGLV3-19P01714 112 aa3.62□□□□□ -1.83
SNHG1-201ENST00000535076 IGHV4-31P0DP07 118 aa3.62□□□□□ -1.83
SNHG1-201ENST00000535076 TFF2Q03403 129 aa3.62□□□□□ -1.83
SNHG1-201ENST00000535076 LINC00242Q5T6M2 205 aa3.62□□□□□ -1.83
SNHG1-201ENST00000535076 DEFB132Q7Z7B7 95 aa3.62□□□□□ -1.83
SNHG1-201ENST00000535076 SPTSSBQ8NFR3 76 aa3.62□□□□□ -1.83
SNHG1-201ENST00000535076 LINC00574Q9H8X3 128 aa3.62□□□□□ -1.83
SNHG1-201ENST00000535076 XAGE1AQ9HD64 81 aa3.62□□□□□ -1.83
SNHG1-201ENST00000535076 C14orf132Q9NPU4 83 aa3.62□□□□□ -1.83
SNHG1-201ENST00000535076 LRRK1Q38SD2 2015 aa3.61□□□□□ -1.83
SNHG1-201ENST00000535076 IGHV4OR15-8A0A075B7B6 117 aa3.61□□□□□ -1.83
SNHG1-201ENST00000535076 A0A087WW49 117 aa3.61□□□□□ -1.83
SNHG1-201ENST00000535076 IGHV3-16A0A0C4DH30 117 aa3.61□□□□□ -1.83
SNHG1-201ENST00000535076 DNAJC9-AS1A6NH13 148 aa3.61□□□□□ -1.83
SNHG1-201ENST00000535076 C10orf142B7Z368 130 aa3.61□□□□□ -1.83
SNHG1-201ENST00000535076 KRTAP10-11P60412 298 aa3.61□□□□□ -1.83
SNHG1-201ENST00000535076 RPS21P63220 83 aaKnown RBP3.61□□□□□ -1.83
SNHG1-201ENST00000535076 FAM74A4Q5TZK3 123 aa3.61□□□□□ -1.83
SNHG1-201ENST00000535076 FAM27BQ5VT28 67 aa3.61□□□□□ -1.83
SNHG1-201ENST00000535076 Q6ZSV7 163 aa3.61□□□□□ -1.83
SNHG1-201ENST00000535076 CHCHD10Q8WYQ3 142 aaPredicted RBP3.61□□□□□ -1.83
SNHG1-201ENST00000535076 ZNF625Q96I27 306 aaPredicted RBP3.61□□□□□ -1.83
SNHG1-201ENST00000535076 LINC00167Q96N53 147 aa3.61□□□□□ -1.83
SNHG1-201ENST00000535076 Q9BRP9 147 aa3.61□□□□□ -1.83
SNHG1-201ENST00000535076 ZNF706Q9Y5V0 76 aaPredicted RBP3.61□□□□□ -1.83
SNHG1-201ENST00000535076 DSCAMO60469 2012 aa3.61□□□□□ -1.83
SNHG1-201ENST00000535076 LOC110117498A0A087WWA1 95 aa3.6□□□□□ -1.83
SNHG1-201ENST00000535076 TRAV10A0A0B4J240 114 aa3.6□□□□□ -1.83
SNHG1-201ENST00000535076 ERHP84090 104 aaKnown RBP3.6□□□□□ -1.83
SNHG1-201ENST00000535076 MOBPQ13875 183 aa3.6□□□□□ -1.83
SNHG1-201ENST00000535076 DEFB114Q30KQ6 69 aa3.6□□□□□ -1.83
SNHG1-201ENST00000535076 SPINK9Q5DT21 86 aa3.6□□□□□ -1.83
SNHG1-201ENST00000535076 CASC2Q6XLA1 102 aa3.6□□□□□ -1.83
SNHG1-201ENST00000535076 Q8N9P0 234 aaPredicted RBP3.6□□□□□ -1.83
SNHG1-201ENST00000535076 ZNRF1Q8ND25 227 aa3.6□□□□□ -1.83
SNHG1-201ENST00000535076 OCR1Q9BZK8 76 aa3.6□□□□□ -1.83
SNHG1-201ENST00000535076 ORMDL1Q9P0S3 153 aa3.6□□□□□ -1.83
SNHG1-201ENST00000535076 MUC22E2RYF6 1773 aaPredicted RBP3.6□□□□□ -1.83
SNHG1-201ENST00000535076 TET2Q6N021 2002 aaPredicted RBP3.6□□□□□ -1.83
SNHG1-201ENST00000535076 IGKV1D-37A0A075B6S9 117 aa3.59□□□□□ -1.83
SNHG1-201ENST00000535076 IGHV1-18A0A0C4DH31 117 aa3.59□□□□□ -1.83
SNHG1-201ENST00000535076 BPY2O14599 106 aa3.59□□□□□ -1.83
SNHG1-201ENST00000535076 TSHBP01222 138 aa3.59□□□□□ -1.83
SNHG1-201ENST00000535076 LINC01547P58512 204 aaPredicted RBP3.59□□□□□ -1.83
SNHG1-201ENST00000535076 SEC61BP60468 96 aaKnown RBP3.59□□□□□ -1.83
SNHG1-201ENST00000535076 CELA1Q9UNI1 258 aa3.59□□□□□ -1.83
SNHG1-201ENST00000535076 FREM1Q5H8C1 2179 aa3.58□□□□□ -1.84
SNHG1-201ENST00000535076 TRAV12-3A0A0B4J271 114 aa3.58□□□□□ -1.84
SNHG1-201ENST00000535076 IGHV3-30-3P0DP02 117 aa3.58□□□□□ -1.84
SNHG1-201ENST00000535076 Q6ZS52 159 aa3.58□□□□□ -1.84
SNHG1-201ENST00000535076 ZNF843Q8N446 348 aa3.58□□□□□ -1.84
SNHG1-201ENST00000535076 SPANXA2-OT1Q8N9U9 137 aa3.58□□□□□ -1.84
SNHG1-201ENST00000535076 ZCCHC13Q8WW36 166 aaKnown RBP3.58□□□□□ -1.84
SNHG1-201ENST00000535076 LINC00467Q9BRT7 94 aa3.58□□□□□ -1.84
SNHG1-201ENST00000535076 PLXNB1O43157 2135 aa3.58□□□□□ -1.84
SNHG1-201ENST00000535076 ARFGEF3Q5TH69 2177 aa3.58□□□□□ -1.84
SNHG1-201ENST00000535076 SPAG17Q6Q759 2223 aa3.58□□□□□ -1.84
SNHG1-201ENST00000535076 IGHV3OR16-13A0A075B7E8 117 aa3.57□□□□□ -1.84
SNHG1-201ENST00000535076 TRBV6-5A0A0K0K1A5 114 aa3.57□□□□□ -1.84
SNHG1-201ENST00000535076 A6NED7 52 aa3.57□□□□□ -1.84
SNHG1-201ENST00000535076 NDUFA1O15239 70 aa3.57□□□□□ -1.84
SNHG1-201ENST00000535076 CDK2AP2O75956 126 aa3.57□□□□□ -1.84
SNHG1-201ENST00000535076 GAS8-AS1O95177 125 aa3.57□□□□□ -1.84
SNHG1-201ENST00000535076 DEFB134Q4QY38 66 aa3.57□□□□□ -1.84
SNHG1-201ENST00000535076 C9orf66Q5T8R8 295 aa3.57□□□□□ -1.84
SNHG1-201ENST00000535076 HCP5Q6MZN7 132 aa3.57□□□□□ -1.84
SNHG1-201ENST00000535076 LINC00308Q8TCZ7 52 aa3.57□□□□□ -1.84
SNHG1-201ENST00000535076 COX14Q96I36 57 aa3.57□□□□□ -1.84
SNHG1-201ENST00000535076 FAM218AQ96MZ4 157 aa3.57□□□□□ -1.84
SNHG1-201ENST00000535076 CACNA1IQ9P0X4 2223 aa3.56□□□□□ -1.84
SNHG1-201ENST00000535076 ALPK2Q86TB3 2170 aa3.56□□□□□ -1.84
SNHG1-201ENST00000535076 ZNF32P17041 273 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms