RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-208ENST00000533897 LINC00694P0DN24 101 aa3.17□□□□□ -1.9
CTSC-208ENST00000533897 TIRAPP58753 221 aa3.17□□□□□ -1.9
CTSC-208ENST00000533897 RPL11P62913 178 aaKnown RBP3.17□□□□□ -1.9
CTSC-208ENST00000533897 SHISA2Q6UWI4 295 aa3.17□□□□□ -1.9
CTSC-208ENST00000533897 C18orf65Q6ZTR6 163 aa3.17□□□□□ -1.9
CTSC-208ENST00000533897 TMEM61Q8N0U2 210 aa3.17□□□□□ -1.9
CTSC-208ENST00000533897 NIPBLQ6KC79 2804 aaeCLIP3.17□□□□□ -1.9
CTSC-208ENST00000533897 PDZD2O15018 2839 aa3.17□□□□□ -1.9
CTSC-208ENST00000533897 PLAC8L1A1L4L8 177 aa3.17□□□□□ -1.9
CTSC-208ENST00000533897 J3QR89 54 aa3.17□□□□□ -1.9
CTSC-208ENST00000533897 NDUFA1O15239 70 aa3.17□□□□□ -1.9
CTSC-208ENST00000533897 SLC25A20O43772 301 aa3.17□□□□□ -1.9
CTSC-208ENST00000533897 PRM2P04554 102 aa3.17□□□□□ -1.9
CTSC-208ENST00000533897 CEMP1Q6PRD7 247 aaPredicted RBP3.17□□□□□ -1.9
CTSC-208ENST00000533897 ZNF625Q96I27 306 aaPredicted RBP3.17□□□□□ -1.9
CTSC-208ENST00000533897 CSDC2Q9Y534 153 aaKnown RBP3.17□□□□□ -1.9
CTSC-208ENST00000533897 IGF2RP11717 2491 aa3.16□□□□□ -1.9
CTSC-208ENST00000533897 WNK2Q9Y3S1 2297 aa3.16□□□□□ -1.9
CTSC-208ENST00000533897 TRAV8-3A0A0A6YYJ7 113 aa3.16□□□□□ -1.9
CTSC-208ENST00000533897 TRBV10-2A0A0K0K1G8 114 aa3.16□□□□□ -1.9
CTSC-208ENST00000533897 HOXD3P31249 432 aaPredicted RBP3.16□□□□□ -1.9
CTSC-208ENST00000533897 COX6A2Q02221 97 aa3.16□□□□□ -1.9
CTSC-208ENST00000533897 LINC01620Q4KN68 170 aa3.16□□□□□ -1.9
CTSC-208ENST00000533897 SCGB1D4Q6XE38 83 aa3.16□□□□□ -1.9
CTSC-208ENST00000533897 Q6ZSV7 163 aa3.16□□□□□ -1.9
CTSC-208ENST00000533897 CCL19Q99731 98 aa3.16□□□□□ -1.9
CTSC-208ENST00000533897 SPANXA1Q9NS26 97 aa3.16□□□□□ -1.9
CTSC-208ENST00000533897 DNAH3Q8TD57 4116 aa3.16□□□□□ -1.9
CTSC-208ENST00000533897 TRGV11A0A075B6L2 103 aa3.16□□□□□ -1.9
CTSC-208ENST00000533897 FAM240AA0A1B0GVK7 77 aa3.16□□□□□ -1.9
CTSC-208ENST00000533897 B4DSR2 109 aa3.16□□□□□ -1.9
CTSC-208ENST00000533897 J3QLI3 93 aa3.16□□□□□ -1.9
CTSC-208ENST00000533897 LST1O00453 97 aa3.16□□□□□ -1.9
CTSC-208ENST00000533897 GIG44P09565 113 aaPredicted RBP3.16□□□□□ -1.9
CTSC-208ENST00000533897 CD28P10747 220 aa3.16□□□□□ -1.9
CTSC-208ENST00000533897 SRSF9Q13242 221 aaKnown RBP eCLIP3.16□□□□□ -1.9
CTSC-208ENST00000533897 TMEM170BQ5T4T1 132 aa3.16□□□□□ -1.9
CTSC-208ENST00000533897 SOSTDC1Q6X4U4 206 aa3.16□□□□□ -1.9
CTSC-208ENST00000533897 IGHV3OR16-12A0A075B7B8 117 aa3.16□□□□□ -1.9
CTSC-208ENST00000533897 A8MWV9 139 aa3.16□□□□□ -1.9
CTSC-208ENST00000533897 A8MZ25 164 aa3.16□□□□□ -1.9
CTSC-208ENST00000533897 CKS1BP61024 79 aa3.16□□□□□ -1.9
CTSC-208ENST00000533897 NTM-AS1Q6ZSK4 140 aa3.16□□□□□ -1.9
CTSC-208ENST00000533897 SETXQ7Z333 2677 aaKnown RBP3.16□□□□□ -1.9
CTSC-208ENST00000533897 DNAJC30Q96LL9 226 aa3.16□□□□□ -1.9
CTSC-208ENST00000533897 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.15□□□□□ -1.9
CTSC-208ENST00000533897 A0A1B0GV72 72 aa3.15□□□□□ -1.9
CTSC-208ENST00000533897 SPINK8P0C7L1 97 aa3.15□□□□□ -1.9
CTSC-208ENST00000533897 IFITM1P13164 125 aa3.15□□□□□ -1.9
CTSC-208ENST00000533897 VPREB3Q9UKI3 123 aa3.15□□□□□ -1.9
CTSC-208ENST00000533897 PTPRZ1P23471 2315 aaPredicted RBP3.15□□□□□ -1.9
CTSC-208ENST00000533897 LGALS3P17931 250 aaKnown RBP3.15□□□□□ -1.9
CTSC-208ENST00000533897 SNRPD3P62318 126 aaKnown RBP3.15□□□□□ -1.9
CTSC-208ENST00000533897 LYRM7Q5U5X0 104 aa3.15□□□□□ -1.9
CTSC-208ENST00000533897 TMEM101Q96IK0 257 aa3.15□□□□□ -1.9
CTSC-208ENST00000533897 ICOSQ9Y6W8 199 aa3.15□□□□□ -1.9
CTSC-208ENST00000533897 TRAV26-1A0A087WT03 109 aa3.15□□□□□ -1.91
CTSC-208ENST00000533897 SYNJ2BPP57105 145 aa3.15□□□□□ -1.91
CTSC-208ENST00000533897 ZNF56Q15929 161 aa3.15□□□□□ -1.91
CTSC-208ENST00000533897 LINC00242Q5T6M2 205 aa3.15□□□□□ -1.91
CTSC-208ENST00000533897 SFTA2Q6UW10 78 aa3.15□□□□□ -1.91
CTSC-208ENST00000533897 MAP6D1Q9H9H5 199 aa3.15□□□□□ -1.91
CTSC-208ENST00000533897 IGKV3-7A0A075B6H7 116 aa3.15□□□□□ -1.91
CTSC-208ENST00000533897 TRAV4A0A0B4J268 109 aa3.15□□□□□ -1.91
CTSC-208ENST00000533897 TRBV7-7A0A0K0K1E9 115 aa3.15□□□□□ -1.91
CTSC-208ENST00000533897 TEX49A0A1B0GTD5 131 aa3.15□□□□□ -1.91
CTSC-208ENST00000533897 DSCR9P59020 149 aa3.15□□□□□ -1.91
CTSC-208ENST00000533897 FAM74A4Q5TZK3 123 aa3.15□□□□□ -1.91
CTSC-208ENST00000533897 RAX2Q96IS3 184 aa3.15□□□□□ -1.91
CTSC-208ENST00000533897 MAP1BP46821 2468 aaKnown RBP3.14□□□□□ -1.91
CTSC-208ENST00000533897 LOC107984156A0A0G2JMH3 177 aa3.14□□□□□ -1.91
CTSC-208ENST00000533897 KNCNA6PVL3 124 aa3.14□□□□□ -1.91
CTSC-208ENST00000533897 SMIM1B2RUZ4 78 aa3.14□□□□□ -1.91
CTSC-208ENST00000533897 IGHV4-31P0DP07 118 aa3.14□□□□□ -1.91
CTSC-208ENST00000533897 ATXN8Q156A1 80 aa3.14□□□□□ -1.91
CTSC-208ENST00000533897 MRPL23Q16540 153 aaKnown RBP3.14□□□□□ -1.91
CTSC-208ENST00000533897 ARL17AQ8IVW1 177 aa3.14□□□□□ -1.91
CTSC-208ENST00000533897 C1orf158Q8N1D5 194 aa3.14□□□□□ -1.91
CTSC-208ENST00000533897 LINC01356Q8N9X3 169 aa3.14□□□□□ -1.91
CTSC-208ENST00000533897 C4orf3Q8WVX3 66 aa3.14□□□□□ -1.91
CTSC-208ENST00000533897 GEMIN7Q9H840 131 aaKnown RBP3.14□□□□□ -1.91
CTSC-208ENST00000533897 RIF1Q5UIP0 2472 aaKnown RBP3.14□□□□□ -1.91
CTSC-208ENST00000533897 H3BT86 120 aa3.14□□□□□ -1.91
CTSC-208ENST00000533897 Q96MF0 132 aa3.14□□□□□ -1.91
CTSC-208ENST00000533897 OBSCN-AS1Q96MR7 158 aa3.14□□□□□ -1.91
CTSC-208ENST00000533897 C9JAW5 83 aa3.14□□□□□ -1.91
CTSC-208ENST00000533897 SLURP1P55000 103 aa3.14□□□□□ -1.91
CTSC-208ENST00000533897 CDKN2A-AS1Q9UH64 79 aa3.14□□□□□ -1.91
CTSC-208ENST00000533897 ADARB2-AS1A8MUL3 147 aa3.13□□□□□ -1.91
CTSC-208ENST00000533897 DEFB114Q30KQ6 69 aa3.13□□□□□ -1.91
CTSC-208ENST00000533897 ODF3L2Q3SX64 289 aa3.13□□□□□ -1.91
CTSC-208ENST00000533897 SMCR5Q8TEV8 140 aa3.13□□□□□ -1.91
CTSC-208ENST00000533897 NRGNQ92686 78 aa3.13□□□□□ -1.91
CTSC-208ENST00000533897 C19orf73Q9NVV2 129 aa3.13□□□□□ -1.91
CTSC-208ENST00000533897 TEX15Q9BXT5 2789 aa3.13□□□□□ -1.91
CTSC-208ENST00000533897 MAP1AP78559 2803 aaPredicted RBP3.13□□□□□ -1.91
CTSC-208ENST00000533897 IGHV3-64A0A075B6Q5 118 aa3.13□□□□□ -1.91
CTSC-208ENST00000533897 CSNK1G2-AS1Q8NCQ2 148 aa3.13□□□□□ -1.91
CTSC-208ENST00000533897 NDUFA12Q9UI09 145 aa3.13□□□□□ -1.91
CTSC-208ENST00000533897 DOPEY1Q5JWR5 2465 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms