RNA–Protein interactions for RNA: ENST00000530701.1

FGFR1-235, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 276 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-235ENST00000530701 IFT172Q9UG01 1749 aa0.68□□□□□ -2.3
FGFR1-235ENST00000530701 AP4S1Q9Y587 144 aa0.68□□□□□ -2.3
FGFR1-235ENST00000530701 TET3O43151 1660 aa0.68□□□□□ -2.3
FGFR1-235ENST00000530701 PXDNQ92626 1479 aa0.67□□□□□ -2.3
FGFR1-235ENST00000530701 MRC2Q9UBG0 1479 aa0.67□□□□□ -2.3
FGFR1-235ENST00000530701 PDCD11Q14690 1871 aaKnown RBP0.67□□□□□ -2.3
FGFR1-235ENST00000530701 SPHKAPQ2M3C7 1700 aa0.67□□□□□ -2.3
FGFR1-235ENST00000530701 NAV3Q8IVL0 2385 aa0.67□□□□□ -2.3
FGFR1-235ENST00000530701 TRBV7-3A0A075B6L6 115 aa0.67□□□□□ -2.3
FGFR1-235ENST00000530701 TRAV30A0A087WSZ9 112 aa0.67□□□□□ -2.3
FGFR1-235ENST00000530701 TRGV1A0A0A0MS02 117 aa0.67□□□□□ -2.3
FGFR1-235ENST00000530701 LOC285095A0A1B0GVY8 99 aa0.67□□□□□ -2.3
FGFR1-235ENST00000530701 NAP1L6A6NFF2 107 aa0.67□□□□□ -2.3
FGFR1-235ENST00000530701 H3BQ15 152 aa0.67□□□□□ -2.3
FGFR1-235ENST00000530701 S100A8P05109 93 aa0.67□□□□□ -2.3
FGFR1-235ENST00000530701 GCHFRP30047 84 aa0.67□□□□□ -2.3
FGFR1-235ENST00000530701 S100A10P60903 97 aa0.67□□□□□ -2.3
FGFR1-235ENST00000530701 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.67□□□□□ -2.3
FGFR1-235ENST00000530701 DPH3P1Q9H4G8 78 aa0.67□□□□□ -2.3
FGFR1-235ENST00000530701 DYNLRB1Q9NP97 96 aa0.67□□□□□ -2.3
FGFR1-235ENST00000530701 LENEPQ9Y5L5 61 aa0.67□□□□□ -2.3
FGFR1-235ENST00000530701 CC2D2AQ9P2K1 1620 aa0.67□□□□□ -2.3
FGFR1-235ENST00000530701 C10orf71Q711Q0 1435 aa0.66□□□□□ -2.3
FGFR1-235ENST00000530701 CNTLNQ9NXG0 1405 aa0.66□□□□□ -2.3
FGFR1-235ENST00000530701 ARHGAP5Q13017 1502 aa0.66□□□□□ -2.3
FGFR1-235ENST00000530701 CDK13Q14004 1512 aaKnown RBP0.66□□□□□ -2.3
FGFR1-235ENST00000530701 ZFYVE16Q7Z3T8 1539 aa0.66□□□□□ -2.3
FGFR1-235ENST00000530701 A0A087WTM6 91 aa0.66□□□□□ -2.3
FGFR1-235ENST00000530701 A0A096LNT2 108 aa0.66□□□□□ -2.3
FGFR1-235ENST00000530701 TRAV1-2A0A0B4J238 106 aa0.66□□□□□ -2.3
FGFR1-235ENST00000530701 CTXND1A0A1B0GTU2 59 aa0.66□□□□□ -2.3
FGFR1-235ENST00000530701 CLPSL1A2RUU4 121 aa0.66□□□□□ -2.3
FGFR1-235ENST00000530701 TMEM14DPA8MWL7 114 aa0.66□□□□□ -2.3
FGFR1-235ENST00000530701 TMEM262E9PQX1 116 aa0.66□□□□□ -2.3
FGFR1-235ENST00000530701 KRTAP10-4P60372 401 aaPredicted RBP0.66□□□□□ -2.3
FGFR1-235ENST00000530701 TMEM170BQ5T4T1 132 aa0.66□□□□□ -2.3
FGFR1-235ENST00000530701 VMO1Q7Z5L0 202 aa0.66□□□□□ -2.3
FGFR1-235ENST00000530701 SMIM4Q8WVI0 70 aa0.66□□□□□ -2.3
FGFR1-235ENST00000530701 WFDC6Q9BQY6 131 aa0.66□□□□□ -2.3
FGFR1-235ENST00000530701 NPVFQ9HCQ7 196 aa0.66□□□□□ -2.3
FGFR1-235ENST00000530701 V9GYH0 126 aa0.66□□□□□ -2.3
FGFR1-235ENST00000530701 PLXNB2O15031 1838 aa0.66□□□□□ -2.3
FGFR1-235ENST00000530701 TRIOBPQ9H2D6 2365 aa0.65□□□□□ -2.3
FGFR1-235ENST00000530701 CADP27708 2225 aa0.65□□□□□ -2.3
FGFR1-235ENST00000530701 SCAPERQ9BY12 1400 aa0.65□□□□□ -2.3
FGFR1-235ENST00000530701 CHD1O14646 1710 aa0.65□□□□□ -2.31
FGFR1-235ENST00000530701 CRYM-AS1A6NIL9 109 aa0.65□□□□□ -2.31
FGFR1-235ENST00000530701 M0R143 59 aa0.65□□□□□ -2.31
FGFR1-235ENST00000530701 APOC3P02656 99 aa0.65□□□□□ -2.31
FGFR1-235ENST00000530701 LINC00032P0C843 101 aa0.65□□□□□ -2.31
FGFR1-235ENST00000530701 TSLPQ969D9 159 aa0.65□□□□□ -2.31
FGFR1-235ENST00000530701 Q96NJ1 140 aa0.65□□□□□ -2.31
FGFR1-235ENST00000530701 MANBALQ9NQG1 85 aa0.65□□□□□ -2.31
FGFR1-235ENST00000530701 BTAF1O14981 1849 aa0.65□□□□□ -2.31
FGFR1-235ENST00000530701 TOPAZ1Q8N9V7 1692 aa0.65□□□□□ -2.31
FGFR1-235ENST00000530701 SHROOM2Q13796 1616 aa0.64□□□□□ -2.31
FGFR1-235ENST00000530701 OTOGLQ3ZCN5 2332 aa0.64□□□□□ -2.31
FGFR1-235ENST00000530701 HELZ2Q9BYK8 2649 aaKnown RBP0.64□□□□□ -2.31
FGFR1-235ENST00000530701 CHKB-CPT1BH3BT56 60 aa0.64□□□□□ -2.31
FGFR1-235ENST00000530701 M0R135 149 aa0.64□□□□□ -2.31
FGFR1-235ENST00000530701 CCL18P55774 89 aa0.64□□□□□ -2.31
FGFR1-235ENST00000530701 CFAP126Q5VTH2 177 aa0.64□□□□□ -2.31
FGFR1-235ENST00000530701 Q6ZRX8 168 aa0.64□□□□□ -2.31
FGFR1-235ENST00000530701 FAIMQ9NVQ4 179 aa0.64□□□□□ -2.31
FGFR1-235ENST00000530701 MRC1P22897 1456 aa0.64□□□□□ -2.31
FGFR1-235ENST00000530701 LAMC3Q9Y6N6 1575 aa0.64□□□□□ -2.31
FGFR1-235ENST00000530701 KDM5AP29375 1690 aaKnown RBP0.64□□□□□ -2.31
FGFR1-235ENST00000530701 KIF21AQ7Z4S6 1674 aa0.64□□□□□ -2.31
FGFR1-235ENST00000530701 MYO7BQ6PIF6 2116 aa0.64□□□□□ -2.31
FGFR1-235ENST00000530701 ZNF236Q9UL36 1845 aa0.64□□□□□ -2.31
FGFR1-235ENST00000530701 VPS8Q8N3P4 1428 aa0.64□□□□□ -2.31
FGFR1-235ENST00000530701 KDM3BQ7LBC6 1761 aa0.63□□□□□ -2.31
FGFR1-235ENST00000530701 CCNB3Q8WWL7 1395 aa0.63□□□□□ -2.31
FGFR1-235ENST00000530701 CACNA1CQ13936 2221 aa0.63□□□□□ -2.31
FGFR1-235ENST00000530701 GVQW2A0A096LPI5 108 aaPredicted RBP0.63□□□□□ -2.31
FGFR1-235ENST00000530701 F8VRH5 84 aa0.63□□□□□ -2.31
FGFR1-235ENST00000530701 HMGN4O00479 90 aa0.63□□□□□ -2.31
FGFR1-235ENST00000530701 UQCR11O14957 56 aa0.63□□□□□ -2.31
FGFR1-235ENST00000530701 COX6CP09669 75 aa0.63□□□□□ -2.31
FGFR1-235ENST00000530701 TRAPPC2P0DI81 140 aa0.63□□□□□ -2.31
FGFR1-235ENST00000530701 TRAPPC2BP0DI82 140 aa0.63□□□□□ -2.31
FGFR1-235ENST00000530701 S100A3P33764 101 aa0.63□□□□□ -2.31
FGFR1-235ENST00000530701 COX17Q14061 63 aa0.63□□□□□ -2.31
FGFR1-235ENST00000530701 Q5VV11 94 aa0.63□□□□□ -2.31
FGFR1-235ENST00000530701 BAGE2Q86Y30 109 aa0.63□□□□□ -2.31
FGFR1-235ENST00000530701 AMELXQ99217 191 aa0.63□□□□□ -2.31
FGFR1-235ENST00000530701 NDUFA4L2Q9NRX3 87 aa0.63□□□□□ -2.31
FGFR1-235ENST00000530701 LINC00474Q9P2X8 69 aa0.63□□□□□ -2.31
FGFR1-235ENST00000530701 LRRC37A2A6NM11 1700 aa0.63□□□□□ -2.31
FGFR1-235ENST00000530701 ANKRD26Q9UPS8 1709 aa0.63□□□□□ -2.31
FGFR1-235ENST00000530701 MYH4Q9Y623 1939 aa0.62□□□□□ -2.31
FGFR1-235ENST00000530701 FYCO1Q9BQS8 1478 aa0.62□□□□□ -2.31
FGFR1-235ENST00000530701 GNGT2O14610 69 aa0.62□□□□□ -2.31
FGFR1-235ENST00000530701 PIN1P1O15428 100 aa0.62□□□□□ -2.31
FGFR1-235ENST00000530701 PKIAP61925 76 aa0.62□□□□□ -2.31
FGFR1-235ENST00000530701 SEC11AP67812 179 aa0.62□□□□□ -2.31
FGFR1-235ENST00000530701 Q0VG73 95 aa0.62□□□□□ -2.31
FGFR1-235ENST00000530701 NCMAPQ5T1S8 102 aa0.62□□□□□ -2.31
FGFR1-235ENST00000530701 KRTAP5-7Q6L8G8 165 aa0.62□□□□□ -2.31
FGFR1-235ENST00000530701 UBE2DNLQ8IWF7 75 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms