RNA–Protein interactions for RNA: ENST00000526570.5

FGFR1-227, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 5,528 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-227ENST00000526570 ZMAT4Q9H898 229 aa9.42□□□□□ -0.9
FGFR1-227ENST00000526570 DEFB130BP0DP73 79 aa9.42□□□□□ -0.9
FGFR1-227ENST00000526570 DEFB130AP0DP74 79 aa9.42□□□□□ -0.9
FGFR1-227ENST00000526570 KIR2DL5BQ8NHK3 375 aa9.42□□□□□ -0.9
FGFR1-227ENST00000526570 DEFB131AP59861 70 aa9.42□□□□□ -0.9
FGFR1-227ENST00000526570 TMEM89A2RUT3 159 aa9.42□□□□□ -0.9
FGFR1-227ENST00000526570 NEXN-AS1Q8NBZ9 246 aa9.42□□□□□ -0.9
FGFR1-227ENST00000526570 GTF3C1Q12789 2109 aa9.41□□□□□ -0.9
FGFR1-227ENST00000526570 IGHV4-59P01825 116 aa9.41□□□□□ -0.9
FGFR1-227ENST00000526570 SPAG11BQ08648 103 aa9.41□□□□□ -0.9
FGFR1-227ENST00000526570 ZNF22P17026 224 aaPredicted RBP9.41□□□□□ -0.9
FGFR1-227ENST00000526570 KRTAP27-1Q3LI81 207 aa9.41□□□□□ -0.9
FGFR1-227ENST00000526570 A0A087WVE0 104 aa9.41□□□□□ -0.9
FGFR1-227ENST00000526570 CRYGAP11844 174 aa9.41□□□□□ -0.9
FGFR1-227ENST00000526570 NDUFA4O00483 81 aa9.4□□□□□ -0.9
FGFR1-227ENST00000526570 SLPIP03973 132 aa9.4□□□□□ -0.9
FGFR1-227ENST00000526570 PRYO14603 147 aa9.4□□□□□ -0.9
FGFR1-227ENST00000526570 LHBP01229 141 aa9.4□□□□□ -0.9
FGFR1-227ENST00000526570 DAZAP2Q15038 168 aaPredicted RBP9.4□□□□□ -0.9
FGFR1-227ENST00000526570 DYSFO75923 2080 aa9.4□□□□□ -0.9
FGFR1-227ENST00000526570 AJUBAQ96IF1 538 aa9.4□□□□□ -0.9
FGFR1-227ENST00000526570 ZGRF1Q86YA3 2104 aa9.4□□□□□ -0.9
FGFR1-227ENST00000526570 H0Y9J4 135 aa9.4□□□□□ -0.91
FGFR1-227ENST00000526570 CXCL6P80162 114 aa9.4□□□□□ -0.91
FGFR1-227ENST00000526570 ESRGQ1W209 222 aa9.4□□□□□ -0.91
FGFR1-227ENST00000526570 MALRD1Q5VYJ5 2156 aa9.4□□□□□ -0.91
FGFR1-227ENST00000526570 ANGP03950 147 aaKnown RBP9.39□□□□□ -0.91
FGFR1-227ENST00000526570 CFHR3Q02985 330 aa9.39□□□□□ -0.91
FGFR1-227ENST00000526570 UBE2DNLQ8IWF7 75 aa9.39□□□□□ -0.91
FGFR1-227ENST00000526570 TNRC6BQ9UPQ9 1833 aaKnown RBP9.39□□□□□ -0.91
FGFR1-227ENST00000526570 IGHV4-38-2P0DP08 117 aa9.39□□□□□ -0.91
FGFR1-227ENST00000526570 MED14OSP0DP75 135 aa9.39□□□□□ -0.91
FGFR1-227ENST00000526570 CLPSL2Q6UWE3 100 aa9.39□□□□□ -0.91
FGFR1-227ENST00000526570 U3KQK5 164 aa9.39□□□□□ -0.91
FGFR1-227ENST00000526570 WFDC10AQ9H1F0 79 aa9.39□□□□□ -0.91
FGFR1-227ENST00000526570 PTPRQQ9UMZ3 2332 aa9.38□□□□□ -0.91
FGFR1-227ENST00000526570 URB1-AS1Q96HZ7 61 aa9.38□□□□□ -0.91
FGFR1-227ENST00000526570 TRBV7-7A0A0K0K1E9 115 aa9.38□□□□□ -0.91
FGFR1-227ENST00000526570 P0C879 139 aa9.38□□□□□ -0.91
FGFR1-227ENST00000526570 KIAA1549LQ6ZVL6 1849 aa9.38□□□□□ -0.91
FGFR1-227ENST00000526570 CD164Q04900 197 aa9.38□□□□□ -0.91
FGFR1-227ENST00000526570 C20orf203Q8NBC4 194 aa9.37□□□□□ -0.91
FGFR1-227ENST00000526570 PLAC8L1A1L4L8 177 aa9.37□□□□□ -0.91
FGFR1-227ENST00000526570 COX7BP24311 80 aa9.37□□□□□ -0.91
FGFR1-227ENST00000526570 TMEM131Q92545 1883 aa9.37□□□□□ -0.91
FGFR1-227ENST00000526570 LINC00308Q8TCZ7 52 aa9.37□□□□□ -0.91
FGFR1-227ENST00000526570 PLCE1Q9P212 2302 aa9.36□□□□□ -0.91
FGFR1-227ENST00000526570 H3BUA1 57 aa9.36□□□□□ -0.91
FGFR1-227ENST00000526570 SPG11Q96JI7 2443 aa9.36□□□□□ -0.91
FGFR1-227ENST00000526570 ACACBO00763 2458 aa9.36□□□□□ -0.91
FGFR1-227ENST00000526570 Q6ZPA2 131 aa9.36□□□□□ -0.91
FGFR1-227ENST00000526570 Q8N9L7 120 aa9.36□□□□□ -0.91
FGFR1-227ENST00000526570 TMEM263Q8WUH6 116 aaKnown RBP9.36□□□□□ -0.91
FGFR1-227ENST00000526570 NOTCH2Q04721 2471 aa9.36□□□□□ -0.91
FGFR1-227ENST00000526570 C9orf47Q6ZRZ4 202 aa9.36□□□□□ -0.91
FGFR1-227ENST00000526570 NACAE9PAV3 2078 aa9.35□□□□□ -0.91
FGFR1-227ENST00000526570 PSCAO43653 123 aa9.35□□□□□ -0.91
FGFR1-227ENST00000526570 NRACQ8N912 160 aa9.35□□□□□ -0.91
FGFR1-227ENST00000526570 ZNF106Q9H2Y7 1883 aaKnown RBP9.35□□□□□ -0.91
FGFR1-227ENST00000526570 C19orf84I3L1E1 186 aa9.34□□□□□ -0.91
FGFR1-227ENST00000526570 MYCNOSP40205 109 aa9.34□□□□□ -0.91
FGFR1-227ENST00000526570 TRBV10-1A0A0K0K1A3 114 aa9.34□□□□□ -0.91
FGFR1-227ENST00000526570 EDN2P20800 178 aa9.34□□□□□ -0.91
FGFR1-227ENST00000526570 FBXL19-AS1Q494R0 122 aa9.34□□□□□ -0.91
FGFR1-227ENST00000526570 UBE2D3P61077 147 aa9.33□□□□□ -0.92
FGFR1-227ENST00000526570 UBE2D2P62837 147 aa9.33□□□□□ -0.92
FGFR1-227ENST00000526570 IGHV7-4-1A0A0J9YVY3 117 aa9.33□□□□□ -0.92
FGFR1-227ENST00000526570 WFDC10BQ8IUB3 73 aa9.33□□□□□ -0.92
FGFR1-227ENST00000526570 CRIP2P52943 208 aaPredicted RBP9.33□□□□□ -0.92
FGFR1-227ENST00000526570 I3L2K1 104 aa9.33□□□□□ -0.92
FGFR1-227ENST00000526570 ZFP36P26651 326 aaKnown RBP9.33□□□□□ -0.92
FGFR1-227ENST00000526570 Q8N6K4 173 aa9.33□□□□□ -0.92
FGFR1-227ENST00000526570 RMI2Q96E14 147 aa9.33□□□□□ -0.92
FGFR1-227ENST00000526570 FAM222AQ5U5X8 452 aa9.32□□□□□ -0.92
FGFR1-227ENST00000526570 FAM30AQ9NZY2 134 aa9.32□□□□□ -0.92
FGFR1-227ENST00000526570 CELA1Q9UNI1 258 aa9.32□□□□□ -0.92
FGFR1-227ENST00000526570 PTPRSQ13332 1948 aa9.32□□□□□ -0.92
FGFR1-227ENST00000526570 MUC22E2RYF6 1773 aaPredicted RBP9.32□□□□□ -0.92
FGFR1-227ENST00000526570 MSMPQ1L6U9 139 aa9.32□□□□□ -0.92
FGFR1-227ENST00000526570 IGKV1-17P01599 117 aa9.32□□□□□ -0.92
FGFR1-227ENST00000526570 CCKP06307 115 aa9.32□□□□□ -0.92
FGFR1-227ENST00000526570 PRAC2D3DTV9 90 aa9.31□□□□□ -0.92
FGFR1-227ENST00000526570 DEFB136Q30KP8 78 aa9.31□□□□□ -0.92
FGFR1-227ENST00000526570 KIAA1549Q9HCM3 1950 aa9.31□□□□□ -0.92
FGFR1-227ENST00000526570 RITA1Q96K30 269 aa9.31□□□□□ -0.92
FGFR1-227ENST00000526570 CRIP3Q6Q6R5 217 aa9.3□□□□□ -0.92
FGFR1-227ENST00000526570 CAMK2N2Q96S95 79 aa9.3□□□□□ -0.92
FGFR1-227ENST00000526570 DSCAML1Q8TD84 2053 aa9.3□□□□□ -0.92
FGFR1-227ENST00000526570 ZNF80P51504 273 aaPredicted RBP9.3□□□□□ -0.92
FGFR1-227ENST00000526570 C1orf158Q8N1D5 194 aa9.3□□□□□ -0.92
FGFR1-227ENST00000526570 RNF185Q96GF1 192 aa9.3□□□□□ -0.92
FGFR1-227ENST00000526570 LIMD2Q9BT23 127 aa9.3□□□□□ -0.92
FGFR1-227ENST00000526570 HHLA3Q9XRX5 114 aa9.3□□□□□ -0.92
FGFR1-227ENST00000526570 IGKV1D-37A0A075B6S9 117 aa9.3□□□□□ -0.92
FGFR1-227ENST00000526570 APRG1Q8IVJ8 170 aa9.3□□□□□ -0.92
FGFR1-227ENST00000526570 ZNF843Q8N446 348 aa9.3□□□□□ -0.92
FGFR1-227ENST00000526570 MED13Q9UHV7 2174 aa9.29□□□□□ -0.92
FGFR1-227ENST00000526570 A0A0J9YWU9 116 aa9.29□□□□□ -0.92
FGFR1-227ENST00000526570 Q6ZS46 218 aa9.29□□□□□ -0.92
FGFR1-227ENST00000526570 EML6Q6ZMW3 1958 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms