RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 HBBP68871 147 aa7.35□□□□□ -1.23
NEDD8-204ENST00000526430 NRACQ8N912 160 aa7.35□□□□□ -1.23
NEDD8-204ENST00000526430 BORCS7Q96B45 105 aa7.35□□□□□ -1.23
NEDD8-204ENST00000526430 GTSF1LQ9H1H1 148 aa7.35□□□□□ -1.23
NEDD8-204ENST00000526430 NIT2Q9NQR4 276 aa7.35□□□□□ -1.23
NEDD8-204ENST00000526430 TRAV9-1A0A075B6T8 112 aa7.34□□□□□ -1.23
NEDD8-204ENST00000526430 IGHV3-38A0A0C4DH36 116 aa7.34□□□□□ -1.23
NEDD8-204ENST00000526430 TRBV6-5A0A0K0K1A5 114 aa7.34□□□□□ -1.23
NEDD8-204ENST00000526430 PLA2G1BP04054 148 aaKnown RBP7.34□□□□□ -1.23
NEDD8-204ENST00000526430 POLR2KP53803 58 aaKnown RBP7.34□□□□□ -1.23
NEDD8-204ENST00000526430 RPL36AP83881 106 aaKnown RBP7.34□□□□□ -1.23
NEDD8-204ENST00000526430 ELOBQ15370 118 aa7.34□□□□□ -1.23
NEDD8-204ENST00000526430 TMEM136Q6ZRR5 245 aa7.34□□□□□ -1.23
NEDD8-204ENST00000526430 RPL36ALQ969Q0 106 aaKnown RBP7.34□□□□□ -1.23
NEDD8-204ENST00000526430 BTF3L4Q96K17 158 aa7.34□□□□□ -1.23
NEDD8-204ENST00000526430 DNAJC30Q96LL9 226 aa7.34□□□□□ -1.23
NEDD8-204ENST00000526430 TMEM70Q9BUB7 260 aa7.34□□□□□ -1.23
NEDD8-204ENST00000526430 URGCP-MRPS24S4R325 110 aa7.34□□□□□ -1.23
NEDD8-204ENST00000526430 FAT3Q8TDW7 4589 aa7.34□□□□□ -1.23
NEDD8-204ENST00000526430 TGIF2-C20orf24A0A0A6YYL0 155 aa7.33□□□□□ -1.24
NEDD8-204ENST00000526430 NCR2O95944 276 aa7.33□□□□□ -1.24
NEDD8-204ENST00000526430 OXTP01178 125 aa7.33□□□□□ -1.24
NEDD8-204ENST00000526430 SH2D6Q7Z4S9 175 aa7.33□□□□□ -1.24
NEDD8-204ENST00000526430 WFDC10BQ8IUB3 73 aa7.33□□□□□ -1.24
NEDD8-204ENST00000526430 TRBV24-1A0A075B6N3 115 aa7.32□□□□□ -1.24
NEDD8-204ENST00000526430 H7C1H1 209 aa7.32□□□□□ -1.24
NEDD8-204ENST00000526430 GCSHP23434 173 aa7.32□□□□□ -1.24
NEDD8-204ENST00000526430 LELP1Q5T871 98 aa7.32□□□□□ -1.24
NEDD8-204ENST00000526430 SMIM15Q7Z3B0 74 aa7.32□□□□□ -1.24
NEDD8-204ENST00000526430 Q8N3U1 123 aa7.32□□□□□ -1.24
NEDD8-204ENST00000526430 MRAP2Q96G30 205 aa7.32□□□□□ -1.24
NEDD8-204ENST00000526430 HAMPP81172 84 aa7.31□□□□□ -1.24
NEDD8-204ENST00000526430 KCNIP4Q6PIL6 250 aa7.31□□□□□ -1.24
NEDD8-204ENST00000526430 TNFRSF18Q9Y5U5 241 aa7.31□□□□□ -1.24
NEDD8-204ENST00000526430 LRP2P98164 4655 aa7.3□□□□□ -1.24
NEDD8-204ENST00000526430 TRBV6-8A0A0A6YYG3 113 aa7.3□□□□□ -1.24
NEDD8-204ENST00000526430 SDHAF1A6NFY7 115 aa7.3□□□□□ -1.24
NEDD8-204ENST00000526430 D6R8Y8 96 aa7.3□□□□□ -1.24
NEDD8-204ENST00000526430 NPYP01303 97 aa7.3□□□□□ -1.24
NEDD8-204ENST00000526430 S100A8P05109 93 aa7.3□□□□□ -1.24
NEDD8-204ENST00000526430 DNAH10OSP0CZ25 163 aa7.3□□□□□ -1.24
NEDD8-204ENST00000526430 DAZ4Q86SG3 579 aaKnown RBP7.3□□□□□ -1.24
NEDD8-204ENST00000526430 DAZ3Q9NR90 486 aaKnown RBP7.3□□□□□ -1.24
NEDD8-204ENST00000526430 A0A087WTM6 91 aa7.29□□□□□ -1.24
NEDD8-204ENST00000526430 PRSS47A8MTI9 375 aa7.29□□□□□ -1.24
NEDD8-204ENST00000526430 SIVA1O15304 175 aa7.29□□□□□ -1.24
NEDD8-204ENST00000526430 TNFRSF6BO95407 300 aa7.29□□□□□ -1.24
NEDD8-204ENST00000526430 OR10J3Q5JRS4 329 aa7.29□□□□□ -1.24
NEDD8-204ENST00000526430 CBLN2Q8IUK8 224 aa7.29□□□□□ -1.24
NEDD8-204ENST00000526430 GNB1LQ9BYB4 327 aa7.29□□□□□ -1.24
NEDD8-204ENST00000526430 TRBV27A0A0K0K1C4 114 aa7.28□□□□□ -1.24
NEDD8-204ENST00000526430 SCO1O75880 301 aa7.28□□□□□ -1.24
NEDD8-204ENST00000526430 TSHBP01222 138 aa7.28□□□□□ -1.24
NEDD8-204ENST00000526430 S100PP25815 95 aa7.28□□□□□ -1.24
NEDD8-204ENST00000526430 CKS2P33552 79 aa7.28□□□□□ -1.24
NEDD8-204ENST00000526430 SUMO2P61956 95 aaKnown RBP7.28□□□□□ -1.24
NEDD8-204ENST00000526430 IQCJQ1A5X6 159 aa7.28□□□□□ -1.24
NEDD8-204ENST00000526430 KIAA1644Q3SXP7 199 aa7.28□□□□□ -1.24
NEDD8-204ENST00000526430 NIT1Q86X76 327 aa7.28□□□□□ -1.24
NEDD8-204ENST00000526430 CHCHD7Q9BUK0 85 aa7.28□□□□□ -1.24
NEDD8-204ENST00000526430 DNAH8Q96JB1 4490 aa7.27□□□□□ -1.25
NEDD8-204ENST00000526430 COLCA2A8K830 154 aa7.27□□□□□ -1.25
NEDD8-204ENST00000526430 PHOX2AO14813 284 aa7.27□□□□□ -1.25
NEDD8-204ENST00000526430 PPBPP02775 128 aa7.27□□□□□ -1.25
NEDD8-204ENST00000526430 ESDP10768 282 aa7.27□□□□□ -1.25
NEDD8-204ENST00000526430 RPL32P62910 135 aaKnown RBP7.27□□□□□ -1.25
NEDD8-204ENST00000526430 C4orf48Q5BLP8 95 aa7.27□□□□□ -1.25
NEDD8-204ENST00000526430 LINC01556Q5JQF7 62 aa7.27□□□□□ -1.25
NEDD8-204ENST00000526430 PRELID3AQ96N28 172 aa7.27□□□□□ -1.25
NEDD8-204ENST00000526430 C20orf78Q9BR46 151 aa7.27□□□□□ -1.25
NEDD8-204ENST00000526430 ST20Q9HBF5 79 aa7.27□□□□□ -1.25
NEDD8-204ENST00000526430 I3L3M4 83 aa7.26□□□□□ -1.25
NEDD8-204ENST00000526430 NFE4Q86UQ8 179 aa7.26□□□□□ -1.25
NEDD8-204ENST00000526430 ORMDL3Q8N138 153 aa7.26□□□□□ -1.25
NEDD8-204ENST00000526430 ALKBH7Q9BT30 221 aaPredicted RBP7.26□□□□□ -1.25
NEDD8-204ENST00000526430 SMCO4Q9NRQ5 59 aa7.26□□□□□ -1.25
NEDD8-204ENST00000526430 PKHD1L1Q86WI1 4243 aa7.26□□□□□ -1.25
NEDD8-204ENST00000526430 TRAV8-6A0A0B4J262 113 aa7.25□□□□□ -1.25
NEDD8-204ENST00000526430 VCYO14598 125 aa7.25□□□□□ -1.25
NEDD8-204ENST00000526430 IGHV3-30P01768 117 aa7.25□□□□□ -1.25
NEDD8-204ENST00000526430 IGHV3-33P01772 117 aa7.25□□□□□ -1.25
NEDD8-204ENST00000526430 HLA-DQA1P01909 254 aa7.25□□□□□ -1.25
NEDD8-204ENST00000526430 APCSP02743 223 aa7.25□□□□□ -1.25
NEDD8-204ENST00000526430 IGHV3-30-3P0DP02 117 aa7.25□□□□□ -1.25
NEDD8-204ENST00000526430 IGHV3-30-5P0DP03 117 aa7.25□□□□□ -1.25
NEDD8-204ENST00000526430 LINC00528Q8N1L1 170 aa7.25□□□□□ -1.25
NEDD8-204ENST00000526430 FAM104AQ969W3 186 aa7.25□□□□□ -1.25
NEDD8-204ENST00000526430 MRPL18Q9H0U6 180 aaKnown RBP7.25□□□□□ -1.25
NEDD8-204ENST00000526430 IGHV1-24A0A0C4DH33 117 aa7.24□□□□□ -1.25
NEDD8-204ENST00000526430 IBA57-AS1B1ANH7 110 aa7.24□□□□□ -1.25
NEDD8-204ENST00000526430 PPP1R17O96001 155 aa7.24□□□□□ -1.25
NEDD8-204ENST00000526430 PMCHP20382 165 aa7.24□□□□□ -1.25
NEDD8-204ENST00000526430 COTL1Q14019 142 aa7.24□□□□□ -1.25
NEDD8-204ENST00000526430 COX19Q49B96 90 aa7.24□□□□□ -1.25
NEDD8-204ENST00000526430 MPV17L2Q567V2 206 aa7.24□□□□□ -1.25
NEDD8-204ENST00000526430 TMEM97Q5BJF2 176 aa7.24□□□□□ -1.25
NEDD8-204ENST00000526430 Q8N976 141 aa7.24□□□□□ -1.25
NEDD8-204ENST00000526430 SMIM2Q9BVW6 85 aa7.24□□□□□ -1.25
NEDD8-204ENST00000526430 IGLV4-60A0A075B6I1 120 aa7.23□□□□□ -1.25
NEDD8-204ENST00000526430 TRBV25-1A0A075B6N4 114 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms