RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 RBMY1A1P0DJD3 496 aaKnown RBP5.57□□□□□ -1.52
HDAC3-216ENST00000523088 RBMY1CP0DJD4 496 aa5.57□□□□□ -1.52
HDAC3-216ENST00000523088 ZFP36P26651 326 aaKnown RBP5.57□□□□□ -1.52
HDAC3-216ENST00000523088 MFAP2P55001 183 aa5.57□□□□□ -1.52
HDAC3-216ENST00000523088 RBMY1FQ15415 496 aaKnown RBP5.57□□□□□ -1.52
HDAC3-216ENST00000523088 KAAG1Q9UBP8 84 aa5.57□□□□□ -1.52
HDAC3-216ENST00000523088 TEX49A0A1B0GTD5 131 aa5.56□□□□□ -1.52
HDAC3-216ENST00000523088 LOC389332A0A1B0GUA5 103 aa5.56□□□□□ -1.52
HDAC3-216ENST00000523088 LINC01548A6NM66 108 aa5.56□□□□□ -1.52
HDAC3-216ENST00000523088 TRIAP1O43715 76 aa5.56□□□□□ -1.52
HDAC3-216ENST00000523088 NXPH3O95157 252 aa5.56□□□□□ -1.52
HDAC3-216ENST00000523088 LYPD5Q6UWN5 251 aa5.56□□□□□ -1.52
HDAC3-216ENST00000523088 ODF3L1Q8IXM7 274 aa5.56□□□□□ -1.52
HDAC3-216ENST00000523088 PIP4P2Q8N4L2 257 aa5.56□□□□□ -1.52
HDAC3-216ENST00000523088 LINC00337Q8N6G1 96 aa5.56□□□□□ -1.52
HDAC3-216ENST00000523088 TMEM14AQ9Y6G1 99 aa5.56□□□□□ -1.52
HDAC3-216ENST00000523088 A0A087X002 238 aa5.55□□□□□ -1.52
HDAC3-216ENST00000523088 TRAV40A0A0B4J280 105 aa5.55□□□□□ -1.52
HDAC3-216ENST00000523088 DNAJC9-AS1A6NH13 148 aa5.55□□□□□ -1.52
HDAC3-216ENST00000523088 F5H697 171 aa5.55□□□□□ -1.52
HDAC3-216ENST00000523088 PSPHP1O15172 72 aa5.55□□□□□ -1.52
HDAC3-216ENST00000523088 UBE2AP49459 152 aa5.55□□□□□ -1.52
HDAC3-216ENST00000523088 RBM3P98179 157 aaKnown RBP5.55□□□□□ -1.52
HDAC3-216ENST00000523088 TWIST1Q15672 202 aa5.55□□□□□ -1.52
HDAC3-216ENST00000523088 LINC01590Q5TEZ4 76 aa5.55□□□□□ -1.52
HDAC3-216ENST00000523088 C2orf82Q6UX34 121 aa5.55□□□□□ -1.52
HDAC3-216ENST00000523088 KIAA2026Q5HYC2 2103 aa5.54□□□□□ -1.52
HDAC3-216ENST00000523088 SRRM5B3KS81 715 aa5.54□□□□□ -1.52
HDAC3-216ENST00000523088 LHBP01229 141 aa5.54□□□□□ -1.52
HDAC3-216ENST00000523088 LTAP01374 205 aa5.54□□□□□ -1.52
HDAC3-216ENST00000523088 FRMD6-AS1P0C7T7 363 aa5.54□□□□□ -1.52
HDAC3-216ENST00000523088 KISS1Q15726 138 aa5.54□□□□□ -1.52
HDAC3-216ENST00000523088 NSUN5P1Q3KNT7 163 aa5.54□□□□□ -1.52
HDAC3-216ENST00000523088 LYZL2Q7Z4W2 148 aa5.54□□□□□ -1.52
HDAC3-216ENST00000523088 LYPD6Q86Y78 171 aa5.54□□□□□ -1.52
HDAC3-216ENST00000523088 RNF185Q96GF1 192 aa5.54□□□□□ -1.52
HDAC3-216ENST00000523088 GFRA4Q9GZZ7 299 aa5.54□□□□□ -1.52
HDAC3-216ENST00000523088 PRO1854Q9UHT4 67 aa5.54□□□□□ -1.52
HDAC3-216ENST00000523088 NBEAL1Q6ZS30 2694 aa5.54□□□□□ -1.52
HDAC3-216ENST00000523088 A0A087WZ39 114 aa5.53□□□□□ -1.52
HDAC3-216ENST00000523088 TRBV30A0A0K0K1B3 111 aa5.53□□□□□ -1.52
HDAC3-216ENST00000523088 IGKV1-5P01602 117 aa5.53□□□□□ -1.52
HDAC3-216ENST00000523088 S100A4P26447 101 aaKnown RBP5.53□□□□□ -1.52
HDAC3-216ENST00000523088 RPS27P42677 84 aaKnown RBP5.53□□□□□ -1.52
HDAC3-216ENST00000523088 LINC00313P59037 77 aa5.53□□□□□ -1.52
HDAC3-216ENST00000523088 FGF12P61328 243 aa5.53□□□□□ -1.52
HDAC3-216ENST00000523088 BLCAPP62952 87 aa5.53□□□□□ -1.52
HDAC3-216ENST00000523088 RHOHQ15669 191 aa5.53□□□□□ -1.52
HDAC3-216ENST00000523088 ESRGQ1W209 222 aa5.53□□□□□ -1.52
HDAC3-216ENST00000523088 MRPL51Q4U2R6 128 aaKnown RBP5.53□□□□□ -1.52
HDAC3-216ENST00000523088 ATP5EP2Q5VTU8 51 aa5.53□□□□□ -1.52
HDAC3-216ENST00000523088 C11orf72Q8NBR9 251 aa5.53□□□□□ -1.52
HDAC3-216ENST00000523088 DYNLRB2Q8TF09 96 aa5.53□□□□□ -1.52
HDAC3-216ENST00000523088 TRAV7A0A075B6U4 112 aa5.52□□□□□ -1.53
HDAC3-216ENST00000523088 TRBV10-3A0A0K0K1G6 114 aa5.52□□□□□ -1.53
HDAC3-216ENST00000523088 PSPNO60542 156 aa5.52□□□□□ -1.53
HDAC3-216ENST00000523088 TRBV12-3P01733 135 aa5.52□□□□□ -1.53
HDAC3-216ENST00000523088 IGHV4-38-2P0DP08 117 aa5.52□□□□□ -1.53
HDAC3-216ENST00000523088 NANOS3P60323 173 aaKnown RBP5.52□□□□□ -1.53
HDAC3-216ENST00000523088 TNP2Q05952 138 aa5.52□□□□□ -1.53
HDAC3-216ENST00000523088 CIRBPQ14011 172 aaKnown RBP5.52□□□□□ -1.53
HDAC3-216ENST00000523088 Q6YL49 198 aa5.52□□□□□ -1.53
HDAC3-216ENST00000523088 LINC00474Q9P2X8 69 aa5.52□□□□□ -1.53
HDAC3-216ENST00000523088 TENM1Q9UKZ4 2725 aa5.51□□□□□ -1.53
HDAC3-216ENST00000523088 IGKV1D-8A0A087WSZ0 117 aa5.51□□□□□ -1.53
HDAC3-216ENST00000523088 IGHV1-69DA0A0B4J2H0 117 aa5.51□□□□□ -1.53
HDAC3-216ENST00000523088 IGHV3-64DA0A0J9YX35 117 aa5.51□□□□□ -1.53
HDAC3-216ENST00000523088 TMEM14DPA8MWL7 114 aa5.51□□□□□ -1.53
HDAC3-216ENST00000523088 BUB1B-PAK6H3BSN5 160 aa5.51□□□□□ -1.53
HDAC3-216ENST00000523088 M0R1W7 72 aa5.51□□□□□ -1.53
HDAC3-216ENST00000523088 IGHV1-69P01742 117 aa5.51□□□□□ -1.53
HDAC3-216ENST00000523088 INAFM2P0DMQ5 153 aa5.51□□□□□ -1.53
HDAC3-216ENST00000523088 ASB16-AS1Q495Z4 193 aa5.51□□□□□ -1.53
HDAC3-216ENST00000523088 GDF5OSQ5U4N7 250 aa5.51□□□□□ -1.53
HDAC3-216ENST00000523088 LYPD2Q6UXB3 125 aa5.51□□□□□ -1.53
HDAC3-216ENST00000523088 VMO1Q7Z5L0 202 aa5.51□□□□□ -1.53
HDAC3-216ENST00000523088 GPHB5Q86YW7 130 aa5.51□□□□□ -1.53
HDAC3-216ENST00000523088 TIMM21Q9BVV7 248 aa5.51□□□□□ -1.53
HDAC3-216ENST00000523088 C19orf73Q9NVV2 129 aa5.51□□□□□ -1.53
HDAC3-216ENST00000523088 MGAM2Q2M2H8 2515 aa5.5□□□□□ -1.53
HDAC3-216ENST00000523088 LINC01546A6NGU7 62 aa5.5□□□□□ -1.53
HDAC3-216ENST00000523088 IGKV1D-33P01593 117 aa5.5□□□□□ -1.53
HDAC3-216ENST00000523088 IGKV1-33P01594 117 aa5.5□□□□□ -1.53
HDAC3-216ENST00000523088 ZNF22P17026 224 aaPredicted RBP5.5□□□□□ -1.53
HDAC3-216ENST00000523088 FUSP35637 526 aaKnown RBP eCLIP5.5□□□□□ -1.53
HDAC3-216ENST00000523088 PLGLAQ15195 96 aa5.5□□□□□ -1.53
HDAC3-216ENST00000523088 DEFB112Q30KQ8 113 aa5.5□□□□□ -1.53
HDAC3-216ENST00000523088 LINC01554Q52M75 96 aa5.5□□□□□ -1.53
HDAC3-216ENST00000523088 S100A7L2Q5SY68 101 aa5.5□□□□□ -1.53
HDAC3-216ENST00000523088 BRD3OSQ6XYD6 125 aa5.5□□□□□ -1.53
HDAC3-216ENST00000523088 ZNF826PQ6ZT77 177 aa5.5□□□□□ -1.53
HDAC3-216ENST00000523088 FAM223AQ8IWN6 122 aa5.5□□□□□ -1.53
HDAC3-216ENST00000523088 C1orf147Q96MC9 270 aaPredicted RBP5.5□□□□□ -1.53
HDAC3-216ENST00000523088 NPCDR1Q9BY65 106 aa5.5□□□□□ -1.53
HDAC3-216ENST00000523088 DSCAML1Q8TD84 2053 aa5.5□□□□□ -1.53
HDAC3-216ENST00000523088 AGRNO00468 2067 aa5.49□□□□□ -1.53
HDAC3-216ENST00000523088 IGKV1D-13A0A0B4J2D9 117 aa5.49□□□□□ -1.53
HDAC3-216ENST00000523088 IGKV1-9A0A0C4DH69 117 aa5.49□□□□□ -1.53
HDAC3-216ENST00000523088 CLPSL1A2RUU4 121 aa5.49□□□□□ -1.53
HDAC3-216ENST00000523088 A6NN06 94 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms