RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 HIGD1BQ9P298 99 aa18.54■□□□□ 0.56
COL13A1-214ENST00000522165 TRAV8-6A0A0B4J262 113 aa18.53■□□□□ 0.56
COL13A1-214ENST00000522165 MAPKAPK5-AS1Q8N8E1 139 aa18.53■□□□□ 0.56
COL13A1-214ENST00000522165 ZNF25P17030 456 aaPredicted RBP18.53■□□□□ 0.56
COL13A1-214ENST00000522165 EMP1P54849 157 aa18.53■□□□□ 0.56
COL13A1-214ENST00000522165 GAGE1Q13065 139 aa18.53■□□□□ 0.56
COL13A1-214ENST00000522165 PYGO1Q9Y3Y4 419 aa18.53■□□□□ 0.56
COL13A1-214ENST00000522165 TRBV25-1A0A075B6N4 114 aa18.52■□□□□ 0.56
COL13A1-214ENST00000522165 OVOL2Q9BRP0 275 aa18.52■□□□□ 0.56
COL13A1-214ENST00000522165 CHCHD7Q9BUK0 85 aa18.52■□□□□ 0.56
COL13A1-214ENST00000522165 IGLV4-3A0A075B6K6 122 aa18.51■□□□□ 0.55
COL13A1-214ENST00000522165 E9PLD3 99 aa18.51■□□□□ 0.55
COL13A1-214ENST00000522165 OR11H2Q8NH07 326 aa18.51■□□□□ 0.55
COL13A1-214ENST00000522165 PHLDA1Q8WV24 401 aaPredicted RBP18.5■□□□□ 0.55
COL13A1-214ENST00000522165 IGHV3-38A0A0C4DH36 116 aa18.5■□□□□ 0.55
COL13A1-214ENST00000522165 K7EQD1 137 aa18.49■□□□□ 0.55
COL13A1-214ENST00000522165 SEC11AP67812 179 aa18.49■□□□□ 0.55
COL13A1-214ENST00000522165 COTL1Q14019 142 aa18.49■□□□□ 0.55
COL13A1-214ENST00000522165 Q6ZVH6 145 aa18.49■□□□□ 0.55
COL13A1-214ENST00000522165 ZNRF2Q8NHG8 242 aa18.49■□□□□ 0.55
COL13A1-214ENST00000522165 TRBV10-1A0A0K0K1A3 114 aa18.48■□□□□ 0.55
COL13A1-214ENST00000522165 FAM104AQ969W3 186 aa18.48■□□□□ 0.55
COL13A1-214ENST00000522165 PRADC1Q9BSG0 188 aa18.48■□□□□ 0.55
COL13A1-214ENST00000522165 COX11Q9Y6N1 276 aa18.48■□□□□ 0.55
COL13A1-214ENST00000522165 F8P00451 2351 aa18.48■□□□□ 0.55
COL13A1-214ENST00000522165 ORAOV1Q8WV07 137 aa18.48■□□□□ 0.55
COL13A1-214ENST00000522165 CHAC1Q9BUX1 264 aa18.48■□□□□ 0.55
COL13A1-214ENST00000522165 VCX2Q9H322 139 aa18.48■□□□□ 0.55
COL13A1-214ENST00000522165 FLNBO75369 2602 aaKnown RBP18.47■□□□□ 0.55
COL13A1-214ENST00000522165 TRBV7-3A0A075B6L6 115 aa18.47■□□□□ 0.55
COL13A1-214ENST00000522165 GAGE12BA1L429 117 aa18.47■□□□□ 0.55
COL13A1-214ENST00000522165 GAGE7O76087 117 aa18.47■□□□□ 0.55
COL13A1-214ENST00000522165 GAGE12FP0CL80 117 aa18.47■□□□□ 0.55
COL13A1-214ENST00000522165 GAGE12GP0CL81 117 aa18.47■□□□□ 0.55
COL13A1-214ENST00000522165 GAGE12IP0CL82 117 aa18.47■□□□□ 0.55
COL13A1-214ENST00000522165 NFE4Q86UQ8 179 aa18.47■□□□□ 0.55
COL13A1-214ENST00000522165 ATRQ13535 2644 aa18.47■□□□□ 0.55
COL13A1-214ENST00000522165 TEP1Q99973 2627 aaKnown RBP18.47■□□□□ 0.55
COL13A1-214ENST00000522165 TRGV2A0A075B6R0 118 aa18.46■□□□□ 0.55
COL13A1-214ENST00000522165 TAX1BP3O14907 124 aa18.46■□□□□ 0.55
COL13A1-214ENST00000522165 SLC25A29Q8N8R3 303 aa18.46■□□□□ 0.55
COL13A1-214ENST00000522165 NPSP0C0P6 89 aa18.45■□□□□ 0.54
COL13A1-214ENST00000522165 MYMXA0A1B0GTQ4 84 aa18.45■□□□□ 0.54
COL13A1-214ENST00000522165 CRYBA4P53673 196 aa18.45■□□□□ 0.54
COL13A1-214ENST00000522165 RPL36AP83881 106 aaKnown RBP18.45■□□□□ 0.54
COL13A1-214ENST00000522165 CEMP1Q6PRD7 247 aaPredicted RBP18.45■□□□□ 0.54
COL13A1-214ENST00000522165 RPL36ALQ969Q0 106 aaKnown RBP18.45■□□□□ 0.54
COL13A1-214ENST00000522165 AMELXQ99217 191 aa18.45■□□□□ 0.54
COL13A1-214ENST00000522165 SPANXA1Q9NS26 97 aa18.45■□□□□ 0.54
COL13A1-214ENST00000522165 HERVK_113P61574 105 aa18.44■□□□□ 0.54
COL13A1-214ENST00000522165 UBE2D4Q9Y2X8 147 aa18.44■□□□□ 0.54
COL13A1-214ENST00000522165 IGKV2D-29A0A075B6S2 120 aaPredicted RBP18.43■□□□□ 0.54
COL13A1-214ENST00000522165 IGKV2-29A2NJV5 120 aaPredicted RBP18.43■□□□□ 0.54
COL13A1-214ENST00000522165 CIDEAO60543 219 aa18.43■□□□□ 0.54
COL13A1-214ENST00000522165 TMEM170BQ5T4T1 132 aa18.43■□□□□ 0.54
COL13A1-214ENST00000522165 WFDC9Q8NEX5 89 aa18.42■□□□□ 0.54
COL13A1-214ENST00000522165 UBE2D3P61077 147 aa18.4■□□□□ 0.54
COL13A1-214ENST00000522165 UBE2D2P62837 147 aa18.4■□□□□ 0.54
COL13A1-214ENST00000522165 A6NDN8 102 aa18.4■□□□□ 0.54
COL13A1-214ENST00000522165 DAZ4Q86SG3 579 aaKnown RBP18.4■□□□□ 0.54
COL13A1-214ENST00000522165 DAZ3Q9NR90 486 aaKnown RBP18.4■□□□□ 0.54
COL13A1-214ENST00000522165 A0A0J9YXV3 536 aa18.39■□□□□ 0.53
COL13A1-214ENST00000522165 X6R8D5 127 aa18.38■□□□□ 0.53
COL13A1-214ENST00000522165 GAGE12JA6NER3 117 aa18.38■□□□□ 0.53
COL13A1-214ENST00000522165 GAGE4Q13068 117 aa18.38■□□□□ 0.53
COL13A1-214ENST00000522165 GAGE5Q13069 117 aa18.38■□□□□ 0.53
COL13A1-214ENST00000522165 GAGE13Q4V321 117 aa18.38■□□□□ 0.53
COL13A1-214ENST00000522165 TRBV6-4A0A1B0GX49 114 aa18.37■□□□□ 0.53
COL13A1-214ENST00000522165 ZNF815PA8K554 130 aa18.37■□□□□ 0.53
COL13A1-214ENST00000522165 GCSHP23434 173 aa18.37■□□□□ 0.53
COL13A1-214ENST00000522165 ZNF22P17026 224 aaPredicted RBP18.37■□□□□ 0.53
COL13A1-214ENST00000522165 SMIM9A6NGZ8 99 aa18.36■□□□□ 0.53
COL13A1-214ENST00000522165 TAL2Q16559 108 aa18.36■□□□□ 0.53
COL13A1-214ENST00000522165 RNASE13Q5GAN3 156 aaKnown RBP18.36■□□□□ 0.53
COL13A1-214ENST00000522165 KIR2DL5BQ8NHK3 375 aa18.36■□□□□ 0.53
COL13A1-214ENST00000522165 TRGV4A0A0C4DH28 118 aa18.35■□□□□ 0.53
COL13A1-214ENST00000522165 TMEM223A0PJW6 202 aa18.35■□□□□ 0.53
COL13A1-214ENST00000522165 MRPS36P82909 103 aaKnown RBP18.35■□□□□ 0.53
COL13A1-214ENST00000522165 TIMM21Q9BVV7 248 aa18.35■□□□□ 0.53
COL13A1-214ENST00000522165 WIPF1O43516 503 aa18.35■□□□□ 0.53
COL13A1-214ENST00000522165 FXYD2P54710 66 aa18.35■□□□□ 0.53
COL13A1-214ENST00000522165 FHL2Q14192 279 aa18.35■□□□□ 0.53
COL13A1-214ENST00000522165 NTM-AS1Q6ZSK4 140 aa18.35■□□□□ 0.53
COL13A1-214ENST00000522165 Q6ZUT4 128 aa18.35■□□□□ 0.53
COL13A1-214ENST00000522165 CEND1Q8N111 149 aa18.35■□□□□ 0.53
COL13A1-214ENST00000522165 TM2D2Q9BX73 214 aa18.35■□□□□ 0.53
COL13A1-214ENST00000522165 LINC00612Q8N6U2 182 aa18.34■□□□□ 0.53
COL13A1-214ENST00000522165 TSPEAR-AS2P59090 65 aa18.34■□□□□ 0.53
COL13A1-214ENST00000522165 H3BRM9 83 aa18.32■□□□□ 0.52
COL13A1-214ENST00000522165 K7EP13 123 aa18.32■□□□□ 0.52
COL13A1-214ENST00000522165 LOC100131303A0A0U1RQF7 123 aa18.32■□□□□ 0.52
COL13A1-214ENST00000522165 APOC4P55056 127 aa18.31■□□□□ 0.52
COL13A1-214ENST00000522165 PLEKHB2Q96CS7 222 aa18.31■□□□□ 0.52
COL13A1-214ENST00000522165 HIST1H4GQ99525 98 aa18.31■□□□□ 0.52
COL13A1-214ENST00000522165 CBY1Q9Y3M2 126 aa18.31■□□□□ 0.52
COL13A1-214ENST00000522165 DEFB130BP0DP73 79 aa18.3■□□□□ 0.52
COL13A1-214ENST00000522165 DEFB130AP0DP74 79 aa18.3■□□□□ 0.52
COL13A1-214ENST00000522165 J3QQQ9 107 aa18.3■□□□□ 0.52
COL13A1-214ENST00000522165 LEPROTO15243 131 aa18.3■□□□□ 0.52
COL13A1-214ENST00000522165 SBSPONQ8IVN8 264 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms