RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 CDK13Q14004 1512 aaKnown RBP1.48□□□□□ -2.17
SQLE-204ENST00000520493 CASZ1Q86V15 1759 aa1.48□□□□□ -2.17
SQLE-204ENST00000520493 ATP10BO94823 1461 aa1.48□□□□□ -2.17
SQLE-204ENST00000520493 ADGRL2O95490 1459 aa1.48□□□□□ -2.17
SQLE-204ENST00000520493 PLEKHH2Q8IVE3 1493 aa1.48□□□□□ -2.17
SQLE-204ENST00000520493 ITSN2Q9NZM3 1697 aa1.48□□□□□ -2.17
SQLE-204ENST00000520493 ANKRD50Q9ULJ7 1429 aa1.48□□□□□ -2.17
SQLE-204ENST00000520493 APCP25054 2843 aa1.48□□□□□ -2.17
SQLE-204ENST00000520493 PHRF1Q9P1Y6 1649 aaKnown RBP1.48□□□□□ -2.17
SQLE-204ENST00000520493 SPEF2Q9C093 1822 aa1.47□□□□□ -2.17
SQLE-204ENST00000520493 EIF4G3O43432 1585 aaKnown RBP1.47□□□□□ -2.17
SQLE-204ENST00000520493 SORL1Q92673 2214 aa1.47□□□□□ -2.17
SQLE-204ENST00000520493 CCDC179H3BU77 68 aa1.47□□□□□ -2.17
SQLE-204ENST00000520493 FGF7P21781 194 aa1.47□□□□□ -2.17
SQLE-204ENST00000520493 BTG2P78543 158 aa1.47□□□□□ -2.17
SQLE-204ENST00000520493 MIC13Q5XKP0 118 aa1.47□□□□□ -2.17
SQLE-204ENST00000520493 UNQ5815/PRO19632Q6UWF5 114 aa1.47□□□□□ -2.17
SQLE-204ENST00000520493 LYPD5Q6UWN5 251 aa1.47□□□□□ -2.17
SQLE-204ENST00000520493 COPS9Q8WXC6 57 aa1.47□□□□□ -2.17
SQLE-204ENST00000520493 TMEM203Q969S6 136 aa1.47□□□□□ -2.17
SQLE-204ENST00000520493 DMAC1Q96GE9 116 aa1.47□□□□□ -2.17
SQLE-204ENST00000520493 CGREF1Q99674 301 aa1.47□□□□□ -2.17
SQLE-204ENST00000520493 SNRNP25Q9BV90 132 aaKnown RBP1.47□□□□□ -2.17
SQLE-204ENST00000520493 BOKQ9UMX3 212 aaPredicted RBP1.47□□□□□ -2.17
SQLE-204ENST00000520493 PZPP20742 1482 aa1.47□□□□□ -2.17
SQLE-204ENST00000520493 RIMS1Q86UR5 1692 aaKnown RBP1.47□□□□□ -2.17
SQLE-204ENST00000520493 ADCY10Q96PN6 1610 aa1.47□□□□□ -2.17
SQLE-204ENST00000520493 ABCA8O94911 1581 aa1.47□□□□□ -2.17
SQLE-204ENST00000520493 ARHGEF12Q9NZN5 1544 aa1.46□□□□□ -2.18
SQLE-204ENST00000520493 SONP18583 2426 aaKnown RBP1.46□□□□□ -2.18
SQLE-204ENST00000520493 CCDC141Q6ZP82 1450 aa1.46□□□□□ -2.18
SQLE-204ENST00000520493 TEX14Q8IWB6 1497 aa1.46□□□□□ -2.18
SQLE-204ENST00000520493 OTOGQ6ZRI0 2925 aa1.46□□□□□ -2.18
SQLE-204ENST00000520493 PRB1P04280 392 aa1.46□□□□□ -2.18
SQLE-204ENST00000520493 MRPL36Q9P0J6 103 aaKnown RBP1.46□□□□□ -2.18
SQLE-204ENST00000520493 KIF14Q15058 1648 aa1.46□□□□□ -2.18
SQLE-204ENST00000520493 ARHGEF5Q12774 1597 aa1.46□□□□□ -2.18
SQLE-204ENST00000520493 SPENQ96T58 3664 aaKnown RBP1.46□□□□□ -2.18
SQLE-204ENST00000520493 PEAK1Q9H792 1746 aa1.46□□□□□ -2.18
SQLE-204ENST00000520493 KDM5DQ9BY66 1539 aa1.45□□□□□ -2.18
SQLE-204ENST00000520493 MBD5Q9P267 1494 aa1.45□□□□□ -2.18
SQLE-204ENST00000520493 TRAV23DV6A0A075B6W5 121 aa1.45□□□□□ -2.18
SQLE-204ENST00000520493 TRBV10-1A0A0K0K1A3 114 aa1.45□□□□□ -2.18
SQLE-204ENST00000520493 CXorf51AA0A1B0GTR3 108 aa1.45□□□□□ -2.18
SQLE-204ENST00000520493 APOC1P02654 83 aa1.45□□□□□ -2.18
SQLE-204ENST00000520493 IL7P13232 177 aa1.45□□□□□ -2.18
SQLE-204ENST00000520493 OCIAD2Q56VL3 154 aa1.45□□□□□ -2.18
SQLE-204ENST00000520493 NDUFA11Q86Y39 141 aa1.45□□□□□ -2.18
SQLE-204ENST00000520493 SBSPONQ8IVN8 264 aa1.45□□□□□ -2.18
SQLE-204ENST00000520493 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.45□□□□□ -2.18
SQLE-204ENST00000520493 ATG5Q9H1Y0 275 aa1.45□□□□□ -2.18
SQLE-204ENST00000520493 MRPL35Q9NZE8 188 aaKnown RBP1.45□□□□□ -2.18
SQLE-204ENST00000520493 MAST1Q9Y2H9 1570 aa1.45□□□□□ -2.18
SQLE-204ENST00000520493 POLR1AO95602 1720 aaPredicted RBP1.45□□□□□ -2.18
SQLE-204ENST00000520493 CDC42BPAQ5VT25 1732 aa1.45□□□□□ -2.18
SQLE-204ENST00000520493 CPS1P31327 1500 aa1.45□□□□□ -2.18
SQLE-204ENST00000520493 ARHGAP5Q13017 1502 aa1.45□□□□□ -2.18
SQLE-204ENST00000520493 DUOX2Q9NRD8 1548 aa1.45□□□□□ -2.18
SQLE-204ENST00000520493 FAM135AQ9P2D6 1515 aa1.45□□□□□ -2.18
SQLE-204ENST00000520493 CROCC2H7BZ55 1655 aa1.45□□□□□ -2.18
SQLE-204ENST00000520493 STAB2Q8WWQ8 2551 aa1.45□□□□□ -2.18
SQLE-204ENST00000520493 ATG2AQ2TAZ0 1938 aa1.44□□□□□ -2.18
SQLE-204ENST00000520493 DMXL2Q8TDJ6 3036 aa1.44□□□□□ -2.18
SQLE-204ENST00000520493 TRAV17A0A0B4J275 112 aa1.44□□□□□ -2.18
SQLE-204ENST00000520493 IFNGP01579 166 aa1.44□□□□□ -2.18
SQLE-204ENST00000520493 IGKCP01834 107 aa1.44□□□□□ -2.18
SQLE-204ENST00000520493 MEIG1Q5JSS6 88 aa1.44□□□□□ -2.18
SQLE-204ENST00000520493 SPANXN1Q5VSR9 72 aa1.44□□□□□ -2.18
SQLE-204ENST00000520493 OR2T2Q6IF00 324 aa1.44□□□□□ -2.18
SQLE-204ENST00000520493 ZGRF1Q86YA3 2104 aa1.44□□□□□ -2.18
SQLE-204ENST00000520493 ODF3Q96PU9 254 aa1.44□□□□□ -2.18
SQLE-204ENST00000520493 MUC5BQ9HC84 5762 aaPredicted RBP1.44□□□□□ -2.18
SQLE-204ENST00000520493 E9PCH4 1651 aa1.44□□□□□ -2.18
SQLE-204ENST00000520493 TET3O43151 1660 aa1.44□□□□□ -2.18
SQLE-204ENST00000520493 ZMYM4Q5VZL5 1548 aa1.44□□□□□ -2.18
SQLE-204ENST00000520493 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.44□□□□□ -2.18
SQLE-204ENST00000520493 ABCC2Q92887 1545 aa1.44□□□□□ -2.18
SQLE-204ENST00000520493 LAMC1P11047 1609 aa1.44□□□□□ -2.18
SQLE-204ENST00000520493 SHROOM2Q13796 1616 aa1.44□□□□□ -2.18
SQLE-204ENST00000520493 PREX2Q70Z35 1606 aa1.44□□□□□ -2.18
SQLE-204ENST00000520493 EIF2AK4Q9P2K8 1649 aaKnown RBP1.44□□□□□ -2.18
SQLE-204ENST00000520493 BCORL1Q5H9F3 1711 aa1.43□□□□□ -2.18
SQLE-204ENST00000520493 MYO5CQ9NQX4 1742 aa1.43□□□□□ -2.18
SQLE-204ENST00000520493 SPTBN2O15020 2390 aa1.43□□□□□ -2.18
SQLE-204ENST00000520493 UNC13BO14795 1591 aa1.43□□□□□ -2.18
SQLE-204ENST00000520493 PLXNC1O60486 1568 aa1.43□□□□□ -2.18
SQLE-204ENST00000520493 SAMD9LQ8IVG5 1584 aa1.43□□□□□ -2.18
SQLE-204ENST00000520493 SCAPERQ9BY12 1400 aa1.43□□□□□ -2.18
SQLE-204ENST00000520493 RPL37AP61513 92 aaKnown RBP1.43□□□□□ -2.18
SQLE-204ENST00000520493 WHAMMP3Q1A5X7 153 aa1.43□□□□□ -2.18
SQLE-204ENST00000520493 PDCD10Q9BUL8 212 aa1.43□□□□□ -2.18
SQLE-204ENST00000520493 RERGLQ9H628 205 aa1.43□□□□□ -2.18
SQLE-204ENST00000520493 SYCP2Q9BX26 1530 aa1.43□□□□□ -2.18
SQLE-204ENST00000520493 IQGAP3Q86VI3 1631 aa1.43□□□□□ -2.18
SQLE-204ENST00000520493 TET1Q8NFU7 2136 aa1.43□□□□□ -2.18
SQLE-204ENST00000520493 CHD1O14646 1710 aa1.43□□□□□ -2.18
SQLE-204ENST00000520493 MAGI2Q86UL8 1455 aa1.43□□□□□ -2.18
SQLE-204ENST00000520493 DIP2AQ14689 1571 aa1.42□□□□□ -2.18
SQLE-204ENST00000520493 TTC37Q6PGP7 1564 aa1.42□□□□□ -2.18
SQLE-204ENST00000520493 MYOM1P52179 1685 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms