RNA–Protein interactions for RNA: ENST00000519540.5

FAM49B-214, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-214ENST00000519540 ZNRF2Q8NHG8 242 aa13.17□□□□□ -0.3
FAM49B-214ENST00000519540 TRBV10-1A0A0K0K1A3 114 aa13.17□□□□□ -0.3
FAM49B-214ENST00000519540 A0A1B0GV90 55 aa13.17□□□□□ -0.3
FAM49B-214ENST00000519540 K7EQD1 137 aa13.17□□□□□ -0.3
FAM49B-214ENST00000519540 SLC25A29Q8N8R3 303 aa13.17□□□□□ -0.3
FAM49B-214ENST00000519540 KIR2DL5BQ8NHK3 375 aa13.17□□□□□ -0.3
FAM49B-214ENST00000519540 PHLDA1Q8WV24 401 aaPredicted RBP13.17□□□□□ -0.3
FAM49B-214ENST00000519540 OPRPNQ99935 248 aaPredicted RBP13.17□□□□□ -0.3
FAM49B-214ENST00000519540 X6R8D5 127 aa13.17□□□□□ -0.3
FAM49B-214ENST00000519540 TRBV7-3A0A075B6L6 115 aa13.16□□□□□ -0.3
FAM49B-214ENST00000519540 IGHV3-38A0A0C4DH36 116 aa13.16□□□□□ -0.3
FAM49B-214ENST00000519540 CIDEAO60543 219 aa13.16□□□□□ -0.3
FAM49B-214ENST00000519540 CHCHD7Q9BUK0 85 aa13.16□□□□□ -0.3
FAM49B-214ENST00000519540 IGLV4-69A0A075B6H9 119 aa13.15□□□□□ -0.3
FAM49B-214ENST00000519540 SMIM9A6NGZ8 99 aa13.15□□□□□ -0.3
FAM49B-214ENST00000519540 EMP1P54849 157 aa13.15□□□□□ -0.3
FAM49B-214ENST00000519540 PYGO1Q9Y3Y4 419 aa13.15□□□□□ -0.3
FAM49B-214ENST00000519540 COTL1Q14019 142 aa13.15□□□□□ -0.3
FAM49B-214ENST00000519540 RPL36AP83881 106 aaKnown RBP13.14□□□□□ -0.31
FAM49B-214ENST00000519540 MPV17L2Q567V2 206 aa13.14□□□□□ -0.31
FAM49B-214ENST00000519540 RPL36ALQ969Q0 106 aaKnown RBP13.14□□□□□ -0.31
FAM49B-214ENST00000519540 IGLV4-3A0A075B6K6 122 aa13.13□□□□□ -0.31
FAM49B-214ENST00000519540 SIVA1O15304 175 aa13.13□□□□□ -0.31
FAM49B-214ENST00000519540 APOC4P55056 127 aa13.13□□□□□ -0.31
FAM49B-214ENST00000519540 PAPPA-AS1Q5QFB9 102 aa13.13□□□□□ -0.31
FAM49B-214ENST00000519540 COL5A1-AS1Q5SY13 56 aa13.13□□□□□ -0.31
FAM49B-214ENST00000519540 C3orf56Q8N813 242 aa13.13□□□□□ -0.31
FAM49B-214ENST00000519540 TTTY13Q9BZ97 58 aa13.13□□□□□ -0.31
FAM49B-214ENST00000519540 ZMAT5Q9UDW3 170 aaKnown RBP13.13□□□□□ -0.31
FAM49B-214ENST00000519540 C11orf86A6NJI1 115 aa13.12□□□□□ -0.31
FAM49B-214ENST00000519540 PRIMA1Q86XR5 153 aa13.12□□□□□ -0.31
FAM49B-214ENST00000519540 FAM104AQ969W3 186 aa13.12□□□□□ -0.31
FAM49B-214ENST00000519540 LINC00612Q8N6U2 182 aa13.12□□□□□ -0.31
FAM49B-214ENST00000519540 TRBV6-4A0A1B0GX49 114 aa13.11□□□□□ -0.31
FAM49B-214ENST00000519540 UBE2D3P61077 147 aa13.11□□□□□ -0.31
FAM49B-214ENST00000519540 UBE2D2P62837 147 aa13.11□□□□□ -0.31
FAM49B-214ENST00000519540 C12orf54Q6X4T0 127 aa13.11□□□□□ -0.31
FAM49B-214ENST00000519540 VCX2Q9H322 139 aa13.11□□□□□ -0.31
FAM49B-214ENST00000519540 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.1□□□□□ -0.31
FAM49B-214ENST00000519540 TRGV4A0A0C4DH28 118 aa13.1□□□□□ -0.31
FAM49B-214ENST00000519540 IGKV2-29A2NJV5 120 aaPredicted RBP13.1□□□□□ -0.31
FAM49B-214ENST00000519540 NPSP0C0P6 89 aa13.1□□□□□ -0.31
FAM49B-214ENST00000519540 FHL2Q14192 279 aa13.1□□□□□ -0.31
FAM49B-214ENST00000519540 DEFB135Q30KP9 77 aa13.1□□□□□ -0.31
FAM49B-214ENST00000519540 CEMP1Q6PRD7 247 aaPredicted RBP13.1□□□□□ -0.31
FAM49B-214ENST00000519540 SHISA2Q6UWI4 295 aa13.1□□□□□ -0.31
FAM49B-214ENST00000519540 DAZ4Q86SG3 579 aaKnown RBP13.1□□□□□ -0.31
FAM49B-214ENST00000519540 DAZ3Q9NR90 486 aaKnown RBP13.1□□□□□ -0.31
FAM49B-214ENST00000519540 UBE2D4Q9Y2X8 147 aa13.1□□□□□ -0.31
FAM49B-214ENST00000519540 GAGE12JA6NER3 117 aa13.1□□□□□ -0.31
FAM49B-214ENST00000519540 GAGE1Q13065 139 aa13.1□□□□□ -0.31
FAM49B-214ENST00000519540 GAGE4Q13068 117 aa13.1□□□□□ -0.31
FAM49B-214ENST00000519540 GAGE5Q13069 117 aa13.1□□□□□ -0.31
FAM49B-214ENST00000519540 GAGE13Q4V321 117 aa13.1□□□□□ -0.31
FAM49B-214ENST00000519540 SPANXA1Q9NS26 97 aa13.1□□□□□ -0.31
FAM49B-214ENST00000519540 DEFB130BP0DP73 79 aa13.09□□□□□ -0.31
FAM49B-214ENST00000519540 DEFB130AP0DP74 79 aa13.09□□□□□ -0.31
FAM49B-214ENST00000519540 CRYBA4P53673 196 aa13.09□□□□□ -0.31
FAM49B-214ENST00000519540 TMEM97Q5BJF2 176 aa13.09□□□□□ -0.31
FAM49B-214ENST00000519540 OXLD1Q5BKU9 147 aa13.09□□□□□ -0.31
FAM49B-214ENST00000519540 BVES-AS1Q5T3Y7 98 aa13.09□□□□□ -0.31
FAM49B-214ENST00000519540 TRRAPQ9Y4A5 3859 aa13.08□□□□□ -0.31
FAM49B-214ENST00000519540 TRAV8-6A0A0B4J262 113 aa13.08□□□□□ -0.31
FAM49B-214ENST00000519540 E9PLD3 99 aa13.08□□□□□ -0.31
FAM49B-214ENST00000519540 IGHV4-30-4P0DP06 118 aa13.08□□□□□ -0.31
FAM49B-214ENST00000519540 NFE4Q86UQ8 179 aa13.08□□□□□ -0.31
FAM49B-214ENST00000519540 MAPKAPK5-AS1Q8N8E1 139 aa13.08□□□□□ -0.31
FAM49B-214ENST00000519540 AMELXQ99217 191 aa13.08□□□□□ -0.31
FAM49B-214ENST00000519540 FBN1P35555 2871 aaKnown RBP13.08□□□□□ -0.32
FAM49B-214ENST00000519540 NTM-AS1Q6ZSK4 140 aa13.07□□□□□ -0.32
FAM49B-214ENST00000519540 LOC100131303A0A0U1RQF7 123 aa13.06□□□□□ -0.32
FAM49B-214ENST00000519540 OR11H2Q8NH07 326 aa13.06□□□□□ -0.32
FAM49B-214ENST00000519540 TRBV25-1A0A075B6N4 114 aa13.06□□□□□ -0.32
FAM49B-214ENST00000519540 PRADC1Q9BSG0 188 aa13.06□□□□□ -0.32
FAM49B-214ENST00000519540 HIGD1BQ9P298 99 aa13.06□□□□□ -0.32
FAM49B-214ENST00000519540 TMEM170BQ5T4T1 132 aa13.05□□□□□ -0.32
FAM49B-214ENST00000519540 CHAC1Q9BUX1 264 aa13.05□□□□□ -0.32
FAM49B-214ENST00000519540 TIMM21Q9BVV7 248 aa13.05□□□□□ -0.32
FAM49B-214ENST00000519540 A0A0J9YXV3 536 aa13.04□□□□□ -0.32
FAM49B-214ENST00000519540 KRTAP10-11P60412 298 aa13.04□□□□□ -0.32
FAM49B-214ENST00000519540 FAM222AQ5U5X8 452 aa13.04□□□□□ -0.32
FAM49B-214ENST00000519540 LYRM9A8MSI8 78 aa13.03□□□□□ -0.32
FAM49B-214ENST00000519540 HERVK_113P61574 105 aa13.03□□□□□ -0.32
FAM49B-214ENST00000519540 HSD52Q0P140 79 aa13.03□□□□□ -0.32
FAM49B-214ENST00000519540 RNASE13Q5GAN3 156 aaKnown RBP13.03□□□□□ -0.32
FAM49B-214ENST00000519540 GTSF1LQ9H1H1 148 aa13.03□□□□□ -0.32
FAM49B-214ENST00000519540 IGHV4-28A0A0C4DH34 117 aa13.03□□□□□ -0.32
FAM49B-214ENST00000519540 LURAP1LQ8IV03 231 aa13.03□□□□□ -0.32
FAM49B-214ENST00000519540 MYMXA0A1B0GTQ4 84 aa13.02□□□□□ -0.33
FAM49B-214ENST00000519540 MRPS36P82909 103 aaKnown RBP13.02□□□□□ -0.33
FAM49B-214ENST00000519540 Q6ZUT4 128 aa13.02□□□□□ -0.33
FAM49B-214ENST00000519540 SBSPONQ8IVN8 264 aa13.02□□□□□ -0.33
FAM49B-214ENST00000519540 RNF183Q96D59 192 aa13.02□□□□□ -0.33
FAM49B-214ENST00000519540 NBEAL2Q6ZNJ1 2754 aa13.02□□□□□ -0.33
FAM49B-214ENST00000519540 DEFB4AO15263 64 aa13.01□□□□□ -0.33
FAM49B-214ENST00000519540 LINC00694P0DN24 101 aa13.01□□□□□ -0.33
FAM49B-214ENST00000519540 EGFEM1PQ0D2K5 195 aa13.01□□□□□ -0.33
FAM49B-214ENST00000519540 MIFP14174 115 aa13.01□□□□□ -0.33
FAM49B-214ENST00000519540 ZNF22P17026 224 aaPredicted RBP13.01□□□□□ -0.33
FAM49B-214ENST00000519540 DGAT2L7PQ6IED9 249 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms