RNA–Protein interactions for RNA: ENST00000517838.5

PVT1-206, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 518 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-206ENST00000517838 SLC25A34Q6PIV7 304 aa5.35□□□□□ -1.55
PVT1-206ENST00000517838 PHLDA1Q8WV24 401 aaPredicted RBP5.35□□□□□ -1.55
PVT1-206ENST00000517838 C9orf85Q96MD7 179 aa5.35□□□□□ -1.55
PVT1-206ENST00000517838 LINC01587Q99440 93 aa5.35□□□□□ -1.55
PVT1-206ENST00000517838 C20orf78Q9BR46 151 aa5.35□□□□□ -1.55
PVT1-206ENST00000517838 CSTL1Q9H114 145 aa5.35□□□□□ -1.55
PVT1-206ENST00000517838 HERC1Q15751 4861 aa5.34□□□□□ -1.55
PVT1-206ENST00000517838 IGHV3OR16-12A0A075B7B8 117 aa5.34□□□□□ -1.55
PVT1-206ENST00000517838 A0A1B0GV90 55 aa5.34□□□□□ -1.55
PVT1-206ENST00000517838 A0A1B0GVY2 172 aa5.34□□□□□ -1.55
PVT1-206ENST00000517838 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.34□□□□□ -1.55
PVT1-206ENST00000517838 CMC4P56277 68 aaPredicted RBP5.34□□□□□ -1.55
PVT1-206ENST00000517838 TCTAP57738 103 aa5.34□□□□□ -1.55
PVT1-206ENST00000517838 AMTNQ6UX39 209 aa5.34□□□□□ -1.55
PVT1-206ENST00000517838 RASL10AQ92737 203 aa5.34□□□□□ -1.55
PVT1-206ENST00000517838 SCGB3A1Q96QR1 104 aa5.34□□□□□ -1.55
PVT1-206ENST00000517838 C2orf88Q9BSF0 95 aa5.34□□□□□ -1.55
PVT1-206ENST00000517838 SNHG12Q9BXW3 62 aa5.34□□□□□ -1.55
PVT1-206ENST00000517838 JPT2Q9H910 190 aa5.34□□□□□ -1.55
PVT1-206ENST00000517838 MDFICQ9P1T7 246 aa5.34□□□□□ -1.55
PVT1-206ENST00000517838 HSPG2P98160 4391 aa5.34□□□□□ -1.55
PVT1-206ENST00000517838 LINC01546A6NGU7 62 aa5.33□□□□□ -1.56
PVT1-206ENST00000517838 H7C1H1 209 aa5.33□□□□□ -1.56
PVT1-206ENST00000517838 DPM2O94777 84 aa5.33□□□□□ -1.56
PVT1-206ENST00000517838 G0S2P27469 103 aa5.33□□□□□ -1.56
PVT1-206ENST00000517838 NUTF2P61970 127 aaKnown RBP5.33□□□□□ -1.56
PVT1-206ENST00000517838 ZNF876PQ49A33 203 aa5.33□□□□□ -1.56
PVT1-206ENST00000517838 NEGR1Q7Z3B1 354 aa5.33□□□□□ -1.56
PVT1-206ENST00000517838 TRPT1Q86TN4 253 aaKnown RBP5.33□□□□□ -1.56
PVT1-206ENST00000517838 KIR2DL4Q99706 377 aa5.33□□□□□ -1.56
PVT1-206ENST00000517838 KRTAP4-7Q9BYR0 210 aa5.33□□□□□ -1.56
PVT1-206ENST00000517838 TP53TG1Q9Y2A0 90 aa5.33□□□□□ -1.56
PVT1-206ENST00000517838 DNAH6Q9C0G6 4158 aa5.32□□□□□ -1.56
PVT1-206ENST00000517838 IGLV2-18A0A075B6J9 118 aa5.32□□□□□ -1.56
PVT1-206ENST00000517838 PRSS47A8MTI9 375 aa5.32□□□□□ -1.56
PVT1-206ENST00000517838 K7EMI3 77 aa5.32□□□□□ -1.56
PVT1-206ENST00000517838 IGKCP01834 107 aa5.32□□□□□ -1.56
PVT1-206ENST00000517838 NMUP48645 174 aa5.32□□□□□ -1.56
PVT1-206ENST00000517838 HINT1P49773 126 aaPredicted RBP5.32□□□□□ -1.56
PVT1-206ENST00000517838 DEFB135Q30KP9 77 aa5.32□□□□□ -1.56
PVT1-206ENST00000517838 TMEM97Q5BJF2 176 aa5.32□□□□□ -1.56
PVT1-206ENST00000517838 COL5A1-AS1Q5SY13 56 aa5.32□□□□□ -1.56
PVT1-206ENST00000517838 XCL2Q9UBD3 114 aa5.32□□□□□ -1.56
PVT1-206ENST00000517838 CYSLTR1Q9Y271 337 aa5.32□□□□□ -1.56
PVT1-206ENST00000517838 IGHV3-73A0A0B4J1V6 119 aa5.31□□□□□ -1.56
PVT1-206ENST00000517838 A8MTW9 85 aa5.31□□□□□ -1.56
PVT1-206ENST00000517838 M0R2P5 195 aa5.31□□□□□ -1.56
PVT1-206ENST00000517838 VCYO14598 125 aa5.31□□□□□ -1.56
PVT1-206ENST00000517838 RBMY1A1P0DJD3 496 aaKnown RBP5.31□□□□□ -1.56
PVT1-206ENST00000517838 RBMY1CP0DJD4 496 aa5.31□□□□□ -1.56
PVT1-206ENST00000517838 PLNP26678 52 aa5.31□□□□□ -1.56
PVT1-206ENST00000517838 RBMY1FQ15415 496 aaKnown RBP5.31□□□□□ -1.56
PVT1-206ENST00000517838 ODF3L2Q3SX64 289 aa5.31□□□□□ -1.56
PVT1-206ENST00000517838 C2orf66Q6UXQ4 117 aa5.31□□□□□ -1.56
PVT1-206ENST00000517838 LINC00336Q6ZUF6 198 aa5.31□□□□□ -1.56
PVT1-206ENST00000517838 RNF183Q96D59 192 aa5.31□□□□□ -1.56
PVT1-206ENST00000517838 MRPL16Q9NX20 251 aaKnown RBP5.31□□□□□ -1.56
PVT1-206ENST00000517838 DKK2Q9UBU2 259 aa5.31□□□□□ -1.56
PVT1-206ENST00000517838 MRPS16Q9Y3D3 137 aaKnown RBP5.31□□□□□ -1.56
PVT1-206ENST00000517838 LRP1BQ9NZR2 4599 aa5.3□□□□□ -1.56
PVT1-206ENST00000517838 SDHAF1A6NFY7 115 aa5.3□□□□□ -1.56
PVT1-206ENST00000517838 LINC01549A6NIU2 74 aa5.3□□□□□ -1.56
PVT1-206ENST00000517838 A8MWV9 139 aa5.3□□□□□ -1.56
PVT1-206ENST00000517838 RHODO00212 210 aa5.3□□□□□ -1.56
PVT1-206ENST00000517838 COX8AP10176 69 aa5.3□□□□□ -1.56
PVT1-206ENST00000517838 RPL35AP18077 110 aaKnown RBP5.3□□□□□ -1.56
PVT1-206ENST00000517838 APOC4P55056 127 aa5.3□□□□□ -1.56
PVT1-206ENST00000517838 NANOS2P60321 138 aaKnown RBP5.3□□□□□ -1.56
PVT1-206ENST00000517838 RPL32P62910 135 aaKnown RBP5.3□□□□□ -1.56
PVT1-206ENST00000517838 ODF1Q14990 250 aa5.3□□□□□ -1.56
PVT1-206ENST00000517838 POM121L12Q8N7R1 296 aa5.3□□□□□ -1.56
PVT1-206ENST00000517838 STPG4Q8N801 248 aa5.3□□□□□ -1.56
PVT1-206ENST00000517838 DEFB104AQ8WTQ1 72 aa5.3□□□□□ -1.56
PVT1-206ENST00000517838 TOMM6Q96B49 74 aa5.3□□□□□ -1.56
PVT1-206ENST00000517838 SPXQ9BT56 116 aa5.3□□□□□ -1.56
PVT1-206ENST00000517838 TP73-AS1Q9UF72 201 aa5.3□□□□□ -1.56
PVT1-206ENST00000517838 CHTOPQ9Y3Y2 248 aaKnown RBP5.3□□□□□ -1.56
PVT1-206ENST00000517838 TNFRSF18Q9Y5U5 241 aa5.3□□□□□ -1.56
PVT1-206ENST00000517838 KIF25-AS1Q9Y6Z4 181 aa5.3□□□□□ -1.56
PVT1-206ENST00000517838 A0A087WX48 190 aa5.29□□□□□ -1.56
PVT1-206ENST00000517838 RHOHQ15669 191 aa5.29□□□□□ -1.56
PVT1-206ENST00000517838 KIR2DL5BQ8NHK3 375 aa5.29□□□□□ -1.56
PVT1-206ENST00000517838 CLUHP3Q96NS8 147 aa5.29□□□□□ -1.56
PVT1-206ENST00000517838 MRPL35Q9NZE8 188 aaKnown RBP5.29□□□□□ -1.56
PVT1-206ENST00000517838 TRGV1A0A0A0MS02 117 aa5.28□□□□□ -1.56
PVT1-206ENST00000517838 TRBV6-5A0A0K0K1A5 114 aa5.28□□□□□ -1.56
PVT1-206ENST00000517838 F8VRH5 84 aa5.28□□□□□ -1.56
PVT1-206ENST00000517838 CRYGDP07320 174 aa5.28□□□□□ -1.56
PVT1-206ENST00000517838 LINC00315P59091 139 aa5.28□□□□□ -1.56
PVT1-206ENST00000517838 HERVK_113P61574 105 aa5.28□□□□□ -1.56
PVT1-206ENST00000517838 ZC2HC1BQ5TFG8 222 aa5.28□□□□□ -1.56
PVT1-206ENST00000517838 ZFP2Q6ZN57 461 aa5.28□□□□□ -1.56
PVT1-206ENST00000517838 ERASQ7Z444 233 aa5.28□□□□□ -1.56
PVT1-206ENST00000517838 C11orf45Q8TAV5 145 aa5.28□□□□□ -1.56
PVT1-206ENST00000517838 LINC00467Q9BRT7 94 aa5.28□□□□□ -1.56
PVT1-206ENST00000517838 C1QTNF4Q9BXJ3 329 aa5.28□□□□□ -1.56
PVT1-206ENST00000517838 APLNQ9ULZ1 77 aa5.28□□□□□ -1.56
PVT1-206ENST00000517838 APOBP04114 4563 aaKnown RBP5.27□□□□□ -1.57
PVT1-206ENST00000517838 TRAV12-1A0A0B4J245 112 aa5.27□□□□□ -1.57
PVT1-206ENST00000517838 PRSS29PA6NIE9 313 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms