RNA–Protein interactions for RNA: ENST00000516847.1

RN7SKP88-201, Transcript of RNA, 7SK small nuclear pseudogene 88, humanhuman

BASIC

Gene RN7SKP88, Length 250 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP88-201ENST00000516847 SPHKAPQ2M3C7 1700 aa0.35□□□□□ -2.35
RN7SKP88-201ENST00000516847 HMCN1Q96RW7 5635 aa0.35□□□□□ -2.35
RN7SKP88-201ENST00000516847 SHROOM2Q13796 1616 aa0.35□□□□□ -2.35
RN7SKP88-201ENST00000516847 LOC285556D6RIA3 1793 aa0.35□□□□□ -2.35
RN7SKP88-201ENST00000516847 TRBV7-3A0A075B6L6 115 aa0.35□□□□□ -2.35
RN7SKP88-201ENST00000516847 GVQW2A0A096LPI5 108 aaPredicted RBP0.35□□□□□ -2.35
RN7SKP88-201ENST00000516847 LOC285095A0A1B0GVY8 99 aa0.35□□□□□ -2.35
RN7SKP88-201ENST00000516847 TMEM14DPA8MWL7 114 aa0.35□□□□□ -2.35
RN7SKP88-201ENST00000516847 F2Z2F3 143 aa0.35□□□□□ -2.35
RN7SKP88-201ENST00000516847 PPP1R17O96001 155 aa0.35□□□□□ -2.35
RN7SKP88-201ENST00000516847 S100A8P05109 93 aa0.35□□□□□ -2.35
RN7SKP88-201ENST00000516847 SPINT3P49223 89 aa0.35□□□□□ -2.35
RN7SKP88-201ENST00000516847 ZNF137PP52743 207 aa0.35□□□□□ -2.35
RN7SKP88-201ENST00000516847 CCL18P55774 89 aa0.35□□□□□ -2.35
RN7SKP88-201ENST00000516847 C6orf52Q5T4I8 152 aa0.35□□□□□ -2.35
RN7SKP88-201ENST00000516847 BAGE3Q86Y29 109 aa0.35□□□□□ -2.35
RN7SKP88-201ENST00000516847 AMELXQ99217 191 aa0.35□□□□□ -2.35
RN7SKP88-201ENST00000516847 C10orf95Q9H7T3 257 aa0.35□□□□□ -2.35
RN7SKP88-201ENST00000516847 R4GMQ9 66 aa0.35□□□□□ -2.35
RN7SKP88-201ENST00000516847 TCHHQ07283 1943 aa0.34□□□□□ -2.35
RN7SKP88-201ENST00000516847 F5P12259 2224 aa0.34□□□□□ -2.35
RN7SKP88-201ENST00000516847 CCNB3Q8WWL7 1395 aa0.34□□□□□ -2.35
RN7SKP88-201ENST00000516847 FBN3Q75N90 2809 aa0.34□□□□□ -2.35
RN7SKP88-201ENST00000516847 ARHGAP5Q13017 1502 aa0.34□□□□□ -2.35
RN7SKP88-201ENST00000516847 TRGV1A0A0A0MS02 117 aa0.34□□□□□ -2.36
RN7SKP88-201ENST00000516847 A0A0D9SG42 100 aa0.34□□□□□ -2.36
RN7SKP88-201ENST00000516847 ACYP2P14621 99 aa0.34□□□□□ -2.36
RN7SKP88-201ENST00000516847 SPAG11BQ08648 103 aa0.34□□□□□ -2.36
RN7SKP88-201ENST00000516847 PRDM2Q13029 1718 aa0.34□□□□□ -2.36
RN7SKP88-201ENST00000516847 KRTAP21-2Q3LI59 83 aa0.34□□□□□ -2.36
RN7SKP88-201ENST00000516847 SPAG11AQ6PDA7 123 aa0.34□□□□□ -2.36
RN7SKP88-201ENST00000516847 FAM167A-AS1Q96KT0 104 aa0.34□□□□□ -2.36
RN7SKP88-201ENST00000516847 SCAPERQ9BY12 1400 aa0.34□□□□□ -2.36
RN7SKP88-201ENST00000516847 PROK2Q9HC23 129 aa0.34□□□□□ -2.36
RN7SKP88-201ENST00000516847 DYNLRB1Q9NP97 96 aa0.34□□□□□ -2.36
RN7SKP88-201ENST00000516847 CNTLNQ9NXG0 1405 aa0.34□□□□□ -2.36
RN7SKP88-201ENST00000516847 LINC00474Q9P2X8 69 aa0.34□□□□□ -2.36
RN7SKP88-201ENST00000516847 NAV3Q8IVL0 2385 aa0.34□□□□□ -2.36
RN7SKP88-201ENST00000516847 TENM1Q9UKZ4 2725 aa0.34□□□□□ -2.36
RN7SKP88-201ENST00000516847 PSME4Q14997 1843 aa0.34□□□□□ -2.36
RN7SKP88-201ENST00000516847 ZMYM4Q5VZL5 1548 aa0.33□□□□□ -2.36
RN7SKP88-201ENST00000516847 SSC5DA1L4H1 1573 aa0.33□□□□□ -2.36
RN7SKP88-201ENST00000516847 TRAV1-2A0A0B4J238 106 aa0.33□□□□□ -2.36
RN7SKP88-201ENST00000516847 NAP1L6A6NFF2 107 aa0.33□□□□□ -2.36
RN7SKP88-201ENST00000516847 M0R135 149 aa0.33□□□□□ -2.36
RN7SKP88-201ENST00000516847 M0R143 59 aa0.33□□□□□ -2.36
RN7SKP88-201ENST00000516847 HMGN4O00479 90 aa0.33□□□□□ -2.36
RN7SKP88-201ENST00000516847 PIN1P1O15428 100 aa0.33□□□□□ -2.36
RN7SKP88-201ENST00000516847 KRTDAPP60985 99 aa0.33□□□□□ -2.36
RN7SKP88-201ENST00000516847 Q6ZRX8 168 aa0.33□□□□□ -2.36
RN7SKP88-201ENST00000516847 SMIM4Q8WVI0 70 aa0.33□□□□□ -2.36
RN7SKP88-201ENST00000516847 PRR15LQ9BU68 103 aa0.33□□□□□ -2.36
RN7SKP88-201ENST00000516847 CDC42SE2Q9NRR3 84 aa0.33□□□□□ -2.36
RN7SKP88-201ENST00000516847 NDUFA4L2Q9NRX3 87 aa0.33□□□□□ -2.36
RN7SKP88-201ENST00000516847 V9GYH0 126 aa0.33□□□□□ -2.36
RN7SKP88-201ENST00000516847 MRC1P22897 1456 aa0.33□□□□□ -2.36
RN7SKP88-201ENST00000516847 TEX14Q8IWB6 1497 aa0.33□□□□□ -2.36
RN7SKP88-201ENST00000516847 MYOM1P52179 1685 aa0.33□□□□□ -2.36
RN7SKP88-201ENST00000516847 LAMC3Q9Y6N6 1575 aa0.32□□□□□ -2.36
RN7SKP88-201ENST00000516847 MYO7AQ13402 2215 aa0.32□□□□□ -2.36
RN7SKP88-201ENST00000516847 TRAV22A0A0B4J277 110 aa0.32□□□□□ -2.36
RN7SKP88-201ENST00000516847 F8VRH5 84 aa0.32□□□□□ -2.36
RN7SKP88-201ENST00000516847 UQCR11O14957 56 aa0.32□□□□□ -2.36
RN7SKP88-201ENST00000516847 COX6CP09669 75 aa0.32□□□□□ -2.36
RN7SKP88-201ENST00000516847 LINC00032P0C843 101 aa0.32□□□□□ -2.36
RN7SKP88-201ENST00000516847 UBE2D3P61077 147 aa0.32□□□□□ -2.36
RN7SKP88-201ENST00000516847 GNG11P61952 73 aa0.32□□□□□ -2.36
RN7SKP88-201ENST00000516847 UBE2D2P62837 147 aa0.32□□□□□ -2.36
RN7SKP88-201ENST00000516847 TMEM170BQ5T4T1 132 aa0.32□□□□□ -2.36
RN7SKP88-201ENST00000516847 TSLPQ969D9 159 aa0.32□□□□□ -2.36
RN7SKP88-201ENST00000516847 FAM103A1Q9BTL3 118 aaKnown RBP0.32□□□□□ -2.36
RN7SKP88-201ENST00000516847 DPY30Q9C005 99 aa0.32□□□□□ -2.36
RN7SKP88-201ENST00000516847 UQCR10Q9UDW1 63 aa0.32□□□□□ -2.36
RN7SKP88-201ENST00000516847 CRCT1Q9UGL9 99 aa0.32□□□□□ -2.36
RN7SKP88-201ENST00000516847 AP4S1Q9Y587 144 aa0.32□□□□□ -2.36
RN7SKP88-201ENST00000516847 LINC01558Q9Y6Z2 57 aa0.32□□□□□ -2.36
RN7SKP88-201ENST00000516847 GAPVD1Q14C86 1478 aa0.32□□□□□ -2.36
RN7SKP88-201ENST00000516847 FBN2P35556 2912 aa0.32□□□□□ -2.36
RN7SKP88-201ENST00000516847 JMJD1CQ15652 2540 aa0.32□□□□□ -2.36
RN7SKP88-201ENST00000516847 ABCA3Q99758 1704 aa0.32□□□□□ -2.36
RN7SKP88-201ENST00000516847 IFT172Q9UG01 1749 aa0.32□□□□□ -2.36
RN7SKP88-201ENST00000516847 DIP2CQ9Y2E4 1556 aa0.32□□□□□ -2.36
RN7SKP88-201ENST00000516847 CADP27708 2225 aa0.32□□□□□ -2.36
RN7SKP88-201ENST00000516847 ABCC5O15440 1437 aa0.31□□□□□ -2.36
RN7SKP88-201ENST00000516847 ZNF462Q96JM2 2506 aa0.31□□□□□ -2.36
RN7SKP88-201ENST00000516847 TET3O43151 1660 aa0.31□□□□□ -2.36
RN7SKP88-201ENST00000516847 MEGF8Q7Z7M0 2845 aa0.31□□□□□ -2.36
RN7SKP88-201ENST00000516847 GOLGA3Q08378 1498 aa0.31□□□□□ -2.36
RN7SKP88-201ENST00000516847 LRRC37A2A6NM11 1700 aa0.31□□□□□ -2.36
RN7SKP88-201ENST00000516847 IGLC7A0M8Q6 106 aa0.31□□□□□ -2.36
RN7SKP88-201ENST00000516847 G3V318 75 aa0.31□□□□□ -2.36
RN7SKP88-201ENST00000516847 CHKB-CPT1BH3BT56 60 aa0.31□□□□□ -2.36
RN7SKP88-201ENST00000516847 NDUFC1O43677 76 aa0.31□□□□□ -2.36
RN7SKP88-201ENST00000516847 SFT2D2O95562 160 aa0.31□□□□□ -2.36
RN7SKP88-201ENST00000516847 GCHFRP30047 84 aa0.31□□□□□ -2.36
RN7SKP88-201ENST00000516847 SNCAP37840 140 aa0.31□□□□□ -2.36
RN7SKP88-201ENST00000516847 S100A10P60903 97 aa0.31□□□□□ -2.36
RN7SKP88-201ENST00000516847 PKIAP61925 76 aa0.31□□□□□ -2.36
RN7SKP88-201ENST00000516847 PRB3Q04118 309 aaPredicted RBP0.31□□□□□ -2.36
RN7SKP88-201ENST00000516847 Q0VG73 95 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms