RNA–Protein interactions for RNA: ENST00000512617.6

PVT1-202, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 383 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-202ENST00000512617 A6NIN4 97 aa2.1□□□□□ -2.07
PVT1-202ENST00000512617 SLC25A6P12236 298 aa2.1□□□□□ -2.07
PVT1-202ENST00000512617 SSR2P43308 183 aa2.1□□□□□ -2.07
PVT1-202ENST00000512617 POLR2JP52435 117 aaKnown RBP2.1□□□□□ -2.07
PVT1-202ENST00000512617 RBM3P98179 157 aaKnown RBP2.1□□□□□ -2.07
PVT1-202ENST00000512617 C14orf177Q52M58 125 aa2.1□□□□□ -2.07
PVT1-202ENST00000512617 CASC2Q6XLA1 102 aa2.1□□□□□ -2.07
PVT1-202ENST00000512617 ARPINQ7Z6K5 226 aa2.1□□□□□ -2.07
PVT1-202ENST00000512617 FAM19A2Q8N3H0 131 aa2.1□□□□□ -2.07
PVT1-202ENST00000512617 C15orf53Q8NAA6 179 aa2.1□□□□□ -2.07
PVT1-202ENST00000512617 REG4Q9BYZ8 158 aa2.1□□□□□ -2.07
PVT1-202ENST00000512617 SMCO4Q9NRQ5 59 aa2.1□□□□□ -2.07
PVT1-202ENST00000512617 SHROOM3Q8TF72 1996 aa2.1□□□□□ -2.07
PVT1-202ENST00000512617 PCSK5Q92824 1860 aa2.09□□□□□ -2.07
PVT1-202ENST00000512617 DSPP15924 2871 aaKnown RBP2.09□□□□□ -2.07
PVT1-202ENST00000512617 ZFC3H1O60293 1989 aaKnown RBP2.09□□□□□ -2.07
PVT1-202ENST00000512617 IGKV3D-15A0A087WSY6 115 aa2.09□□□□□ -2.07
PVT1-202ENST00000512617 A0A087WYN8 130 aa2.09□□□□□ -2.07
PVT1-202ENST00000512617 IGLC7A0M8Q6 106 aa2.09□□□□□ -2.07
PVT1-202ENST00000512617 PDCD5O14737 125 aa2.09□□□□□ -2.07
PVT1-202ENST00000512617 SFT2D2O95562 160 aa2.09□□□□□ -2.07
PVT1-202ENST00000512617 IGKCP01834 107 aa2.09□□□□□ -2.07
PVT1-202ENST00000512617 BAALC-AS2P0C853 105 aa2.09□□□□□ -2.07
PVT1-202ENST00000512617 ADCYAP1P18509 176 aa2.09□□□□□ -2.07
PVT1-202ENST00000512617 FAUP35544 74 aaKnown RBP2.09□□□□□ -2.07
PVT1-202ENST00000512617 DSCR4P56555 118 aaPredicted RBP2.09□□□□□ -2.07
PVT1-202ENST00000512617 KRTDAPP60985 99 aa2.09□□□□□ -2.07
PVT1-202ENST00000512617 ZNF345Q14585 488 aa2.09□□□□□ -2.07
PVT1-202ENST00000512617 TDRG1Q3Y452 100 aa2.09□□□□□ -2.07
PVT1-202ENST00000512617 LCE4AQ5TA78 99 aa2.09□□□□□ -2.07
PVT1-202ENST00000512617 RPL7L1Q6DKI1 246 aaKnown RBP2.09□□□□□ -2.07
PVT1-202ENST00000512617 TMEM136Q6ZRR5 245 aa2.09□□□□□ -2.07
PVT1-202ENST00000512617 ZNF826PQ6ZT77 177 aa2.09□□□□□ -2.07
PVT1-202ENST00000512617 COMMD6Q7Z4G1 85 aa2.09□□□□□ -2.07
PVT1-202ENST00000512617 LINC00269Q8N2A0 174 aa2.09□□□□□ -2.07
PVT1-202ENST00000512617 OR8B3Q8NGG8 313 aa2.09□□□□□ -2.07
PVT1-202ENST00000512617 TMEM254Q8TBM7 123 aa2.09□□□□□ -2.07
PVT1-202ENST00000512617 S100A16Q96FQ6 103 aaKnown RBP2.09□□□□□ -2.07
PVT1-202ENST00000512617 TMEM141Q96I45 108 aa2.09□□□□□ -2.07
PVT1-202ENST00000512617 KRTAP4-5Q9BYR2 181 aa2.09□□□□□ -2.07
PVT1-202ENST00000512617 NDUFA12Q9UI09 145 aa2.09□□□□□ -2.07
PVT1-202ENST00000512617 IGSF10Q6WRI0 2623 aa2.09□□□□□ -2.08
PVT1-202ENST00000512617 RELNP78509 3460 aa2.08□□□□□ -2.08
PVT1-202ENST00000512617 IGHV3OR16-8A0A075B7F1 116 aa2.08□□□□□ -2.08
PVT1-202ENST00000512617 A0A0J9YX75 114 aa2.08□□□□□ -2.08
PVT1-202ENST00000512617 HMSDA8MTL9 139 aa2.08□□□□□ -2.08
PVT1-202ENST00000512617 E7EUB6 86 aa2.08□□□□□ -2.08
PVT1-202ENST00000512617 J3QKU1 62 aa2.08□□□□□ -2.08
PVT1-202ENST00000512617 ATOX1O00244 68 aa2.08□□□□□ -2.08
PVT1-202ENST00000512617 CCL22O00626 93 aa2.08□□□□□ -2.08
PVT1-202ENST00000512617 CBLN1P23435 193 aa2.08□□□□□ -2.08
PVT1-202ENST00000512617 GNGT1P63211 74 aa2.08□□□□□ -2.08
PVT1-202ENST00000512617 ADIRFQ15847 76 aa2.08□□□□□ -2.08
PVT1-202ENST00000512617 ZNF79Q15937 498 aa2.08□□□□□ -2.08
PVT1-202ENST00000512617 KRTAP25-1Q3LHN0 102 aa2.08□□□□□ -2.08
PVT1-202ENST00000512617 LINC00299Q6ZSB3 139 aa2.08□□□□□ -2.08
PVT1-202ENST00000512617 FAM213BQ8TBF2 198 aa2.08□□□□□ -2.08
PVT1-202ENST00000512617 C20orf166-AS1Q96NR2 134 aa2.08□□□□□ -2.08
PVT1-202ENST00000512617 MGST2Q99735 147 aa2.08□□□□□ -2.08
PVT1-202ENST00000512617 RABAC1Q9UI14 185 aa2.08□□□□□ -2.08
PVT1-202ENST00000512617 S4R3C0 116 aa2.08□□□□□ -2.08
PVT1-202ENST00000512617 NCKAP5O14513 1909 aa2.08□□□□□ -2.08
PVT1-202ENST00000512617 COL6A6A6NMZ7 2263 aa2.08□□□□□ -2.08
PVT1-202ENST00000512617 AHCTF1Q8WYP5 2266 aa2.08□□□□□ -2.08
PVT1-202ENST00000512617 USP9XQ93008 2570 aaPredicted RBP2.07□□□□□ -2.08
PVT1-202ENST00000512617 UNC13CQ8NB66 2214 aa2.07□□□□□ -2.08
PVT1-202ENST00000512617 KALRNO60229 2985 aa2.07□□□□□ -2.08
PVT1-202ENST00000512617 POLEQ07864 2286 aa2.07□□□□□ -2.08
PVT1-202ENST00000512617 EML6Q6ZMW3 1958 aa2.07□□□□□ -2.08
PVT1-202ENST00000512617 IGLV10-54A0A075B6I4 117 aa2.07□□□□□ -2.08
PVT1-202ENST00000512617 TRAV2A0A0B4J234 112 aa2.07□□□□□ -2.08
PVT1-202ENST00000512617 hADV29S1A0JD25 119 aa2.07□□□□□ -2.08
PVT1-202ENST00000512617 ERC2-IT1O76042 136 aa2.07□□□□□ -2.08
PVT1-202ENST00000512617 UBE2G1P62253 170 aa2.07□□□□□ -2.08
PVT1-202ENST00000512617 EIF4EBP1Q13541 118 aaPredicted RBP2.07□□□□□ -2.08
PVT1-202ENST00000512617 Q5BKY6 102 aa2.07□□□□□ -2.08
PVT1-202ENST00000512617 LINC00612Q8N6U2 182 aa2.07□□□□□ -2.08
PVT1-202ENST00000512617 TSLPQ969D9 159 aa2.07□□□□□ -2.08
PVT1-202ENST00000512617 C20orf78Q9BR46 151 aa2.07□□□□□ -2.08
PVT1-202ENST00000512617 HIGD2AQ9BW72 106 aa2.07□□□□□ -2.08
PVT1-202ENST00000512617 BOD1L1Q8NFC6 3051 aa2.07□□□□□ -2.08
PVT1-202ENST00000512617 GCN1Q92616 2671 aaKnown RBP2.06□□□□□ -2.08
PVT1-202ENST00000512617 CFAP46Q8IYW2 2715 aa2.06□□□□□ -2.08
PVT1-202ENST00000512617 SVILO95425 2214 aa2.06□□□□□ -2.08
PVT1-202ENST00000512617 ZNF462Q96JM2 2506 aa2.06□□□□□ -2.08
PVT1-202ENST00000512617 A0A087WSZ3 146 aa2.06□□□□□ -2.08
PVT1-202ENST00000512617 TRAV10A0A0B4J240 114 aa2.06□□□□□ -2.08
PVT1-202ENST00000512617 TRAV17A0A0B4J275 112 aa2.06□□□□□ -2.08
PVT1-202ENST00000512617 TRBV7-7A0A0K0K1E9 115 aa2.06□□□□□ -2.08
PVT1-202ENST00000512617 TCRBV4S1A1TA0A5B7 111 aa2.06□□□□□ -2.08
PVT1-202ENST00000512617 IBA57-AS1B1ANH7 110 aa2.06□□□□□ -2.08
PVT1-202ENST00000512617 PSCAO43653 123 aa2.06□□□□□ -2.08
PVT1-202ENST00000512617 CGAP01215 116 aa2.06□□□□□ -2.08
PVT1-202ENST00000512617 IGKV3-20P01619 116 aa2.06□□□□□ -2.08
PVT1-202ENST00000512617 CCKP06307 115 aa2.06□□□□□ -2.08
PVT1-202ENST00000512617 MIFP14174 115 aa2.06□□□□□ -2.08
PVT1-202ENST00000512617 CCL8P80075 99 aa2.06□□□□□ -2.08
PVT1-202ENST00000512617 RHOHQ15669 191 aa2.06□□□□□ -2.08
PVT1-202ENST00000512617 Q1T7F1 81 aa2.06□□□□□ -2.08
PVT1-202ENST00000512617 DEFB109BQ30KR1 87 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms