RNA–Protein interactions for RNA: ENST00000509088.5

LINC01088-205, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best) BASIC

Gene LINC01088, Length 756 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-205ENST00000509088 TRAV13-2A0A0B4J235 113 aa3.54□□□□□ -1.84
LINC01088-205ENST00000509088 A8MU10 97 aa3.54□□□□□ -1.84
LINC01088-205ENST00000509088 DEFB108AA8MXU0 73 aa3.54□□□□□ -1.84
LINC01088-205ENST00000509088 IBA57-AS1B1ANH7 110 aa3.54□□□□□ -1.84
LINC01088-205ENST00000509088 SRRM5B3KS81 715 aa3.54□□□□□ -1.84
LINC01088-205ENST00000509088 H0YGX0 51 aa3.54□□□□□ -1.84
LINC01088-205ENST00000509088 H7BZZ5 65 aa3.54□□□□□ -1.84
LINC01088-205ENST00000509088 H7C2G1 150 aa3.54□□□□□ -1.84
LINC01088-205ENST00000509088 SAA1P0DJI8 122 aaPredicted RBP3.54□□□□□ -1.84
LINC01088-205ENST00000509088 SAA2P0DJI9 122 aaPredicted RBP3.54□□□□□ -1.84
LINC01088-205ENST00000509088 SPANXN1Q5VSR9 72 aa3.54□□□□□ -1.84
LINC01088-205ENST00000509088 REG3GQ6UW15 175 aa3.54□□□□□ -1.84
LINC01088-205ENST00000509088 LYPD5Q6UWN5 251 aa3.54□□□□□ -1.84
LINC01088-205ENST00000509088 DAZ4Q86SG3 579 aaKnown RBP3.54□□□□□ -1.84
LINC01088-205ENST00000509088 LINC01561Q8N1V8 128 aa3.54□□□□□ -1.84
LINC01088-205ENST00000509088 MDS2Q8NDY4 140 aa3.54□□□□□ -1.84
LINC01088-205ENST00000509088 CCL4L1Q8NHW4 92 aa3.54□□□□□ -1.84
LINC01088-205ENST00000509088 OBSCN-AS1Q96MR7 158 aa3.54□□□□□ -1.84
LINC01088-205ENST00000509088 CCL13Q99616 98 aa3.54□□□□□ -1.84
LINC01088-205ENST00000509088 RNF5Q99942 180 aa3.54□□□□□ -1.84
LINC01088-205ENST00000509088 DAZ3Q9NR90 486 aaKnown RBP3.54□□□□□ -1.84
LINC01088-205ENST00000509088 IGHV3-43A0A0B4J1X8 118 aa3.53□□□□□ -1.84
LINC01088-205ENST00000509088 IGHV3-16A0A0C4DH30 117 aa3.53□□□□□ -1.84
LINC01088-205ENST00000509088 SPTY2D1-AS1A0A0U1RR47 76 aa3.53□□□□□ -1.84
LINC01088-205ENST00000509088 JMJD7-PLA2G4BH0Y9G9 81 aa3.53□□□□□ -1.84
LINC01088-205ENST00000509088 H3BQ85 93 aa3.53□□□□□ -1.84
LINC01088-205ENST00000509088 IGHV4-34P06331 123 aa3.53□□□□□ -1.84
LINC01088-205ENST00000509088 IGHV3-43DP0DP04 118 aa3.53□□□□□ -1.84
LINC01088-205ENST00000509088 LYZP61626 148 aa3.53□□□□□ -1.84
LINC01088-205ENST00000509088 RBM3P98179 157 aaKnown RBP3.53□□□□□ -1.84
LINC01088-205ENST00000509088 WT1-ASQ06250 92 aa3.53□□□□□ -1.84
LINC01088-205ENST00000509088 C9orf66Q5T8R8 295 aa3.53□□□□□ -1.84
LINC01088-205ENST00000509088 FP248Q71RG6 208 aaPredicted RBP3.53□□□□□ -1.84
LINC01088-205ENST00000509088 C17orf82Q86X59 251 aaPredicted RBP3.53□□□□□ -1.84
LINC01088-205ENST00000509088 IGHV3-15A0A0B4J1V0 119 aa3.52□□□□□ -1.85
LINC01088-205ENST00000509088 IGHV1-18A0A0C4DH31 117 aa3.52□□□□□ -1.85
LINC01088-205ENST00000509088 IGHV5-51A0A0C4DH38 117 aa3.52□□□□□ -1.85
LINC01088-205ENST00000509088 TRBV6-5A0A0K0K1A5 114 aa3.52□□□□□ -1.85
LINC01088-205ENST00000509088 NDUFS5O43920 106 aa3.52□□□□□ -1.85
LINC01088-205ENST00000509088 RPL27AP46776 148 aaKnown RBP3.52□□□□□ -1.85
LINC01088-205ENST00000509088 WDR86Q86TI4 376 aa3.52□□□□□ -1.85
LINC01088-205ENST00000509088 RETNQ9HD89 108 aa3.52□□□□□ -1.85
LINC01088-205ENST00000509088 TRBV27A0A0K0K1C4 114 aa3.51□□□□□ -1.85
LINC01088-205ENST00000509088 C10orf142B7Z368 130 aa3.51□□□□□ -1.85
LINC01088-205ENST00000509088 BLCAPP62952 87 aa3.51□□□□□ -1.85
LINC01088-205ENST00000509088 C20orf197Q8N268 126 aa3.51□□□□□ -1.85
LINC01088-205ENST00000509088 WFDC11Q8NEX6 87 aa3.51□□□□□ -1.85
LINC01088-205ENST00000509088 EEF1AKMT3Q96AZ1 226 aa3.51□□□□□ -1.85
LINC01088-205ENST00000509088 UBL5Q9BZL1 73 aa3.51□□□□□ -1.85
LINC01088-205ENST00000509088 FAM223BA6NKX1 122 aa3.5□□□□□ -1.85
LINC01088-205ENST00000509088 M0R1B8 84 aa3.5□□□□□ -1.85
LINC01088-205ENST00000509088 PDE6GP18545 87 aa3.5□□□□□ -1.85
LINC01088-205ENST00000509088 SAA4P35542 130 aa3.5□□□□□ -1.85
LINC01088-205ENST00000509088 RPL28P46779 137 aaKnown RBP3.5□□□□□ -1.85
LINC01088-205ENST00000509088 POLR2KP53803 58 aaKnown RBP3.5□□□□□ -1.85
LINC01088-205ENST00000509088 Q1T7F1 81 aa3.5□□□□□ -1.85
LINC01088-205ENST00000509088 C17orf58Q2M2W7 97 aa3.5□□□□□ -1.85
LINC01088-205ENST00000509088 NSUN5P1Q3KNT7 163 aa3.5□□□□□ -1.85
LINC01088-205ENST00000509088 VMO1Q7Z5L0 202 aa3.5□□□□□ -1.85
LINC01088-205ENST00000509088 PATE1Q8WXA2 126 aa3.5□□□□□ -1.85
LINC01088-205ENST00000509088 CLEC2BQ92478 149 aa3.5□□□□□ -1.85
LINC01088-205ENST00000509088 DEFB118Q96PH6 123 aa3.5□□□□□ -1.85
LINC01088-205ENST00000509088 CYSTM1Q9H1C7 97 aa3.5□□□□□ -1.85
LINC01088-205ENST00000509088 DEFB127Q9H1M4 99 aa3.5□□□□□ -1.85
LINC01088-205ENST00000509088 Q9HAA7 133 aa3.5□□□□□ -1.85
LINC01088-205ENST00000509088 PROK2Q9HC23 129 aa3.5□□□□□ -1.85
LINC01088-205ENST00000509088 CNTRLQ7Z7A1 2325 aa3.5□□□□□ -1.85
LINC01088-205ENST00000509088 LTBP2Q14767 1821 aa3.49□□□□□ -1.85
LINC01088-205ENST00000509088 ZGRF1Q86YA3 2104 aa3.49□□□□□ -1.85
LINC01088-205ENST00000509088 DSCAML1Q8TD84 2053 aa3.49□□□□□ -1.85
LINC01088-205ENST00000509088 I3L2K1 104 aa3.49□□□□□ -1.85
LINC01088-205ENST00000509088 M0R1W7 72 aa3.49□□□□□ -1.85
LINC01088-205ENST00000509088 IGKV1-17P01599 117 aa3.49□□□□□ -1.85
LINC01088-205ENST00000509088 IGLV3-19P01714 112 aa3.49□□□□□ -1.85
LINC01088-205ENST00000509088 IGKV1-16P04430 117 aa3.49□□□□□ -1.85
LINC01088-205ENST00000509088 TSPEAR-AS2P59090 65 aa3.49□□□□□ -1.85
LINC01088-205ENST00000509088 ESRGQ1W209 222 aa3.49□□□□□ -1.85
LINC01088-205ENST00000509088 C14orf178Q8N769 122 aaPredicted RBP3.49□□□□□ -1.85
LINC01088-205ENST00000509088 CSNK1G2-AS1Q8NCQ2 148 aa3.49□□□□□ -1.85
LINC01088-205ENST00000509088 LY6G5BQ8NDX9 201 aa3.49□□□□□ -1.85
LINC01088-205ENST00000509088 HES7Q9BYE0 225 aa3.49□□□□□ -1.85
LINC01088-205ENST00000509088 C11orf68Q9H3H3 251 aaKnown RBP3.49□□□□□ -1.85
LINC01088-205ENST00000509088 MRPL36Q9P0J6 103 aaKnown RBP3.49□□□□□ -1.85
LINC01088-205ENST00000509088 NDUFA12Q9UI09 145 aa3.49□□□□□ -1.85
LINC01088-205ENST00000509088 ARFGEF3Q5TH69 2177 aa3.49□□□□□ -1.85
LINC01088-205ENST00000509088 IGKV1D-17A0A075B6S4 117 aa3.48□□□□□ -1.85
LINC01088-205ENST00000509088 IGKV3D-7A0A0C4DH55 119 aa3.48□□□□□ -1.85
LINC01088-205ENST00000509088 IGHV7-4-1A0A0J9YVY3 117 aa3.48□□□□□ -1.85
LINC01088-205ENST00000509088 H3BTX0 84 aa3.48□□□□□ -1.85
LINC01088-205ENST00000509088 UBE2L6O14933 153 aa3.48□□□□□ -1.85
LINC01088-205ENST00000509088 NDUFA1O15239 70 aa3.48□□□□□ -1.85
LINC01088-205ENST00000509088 IGHV3-30-3P0DP02 117 aa3.48□□□□□ -1.85
LINC01088-205ENST00000509088 RNASE4P34096 147 aaKnown RBP3.48□□□□□ -1.85
LINC01088-205ENST00000509088 MAGEA5P43359 124 aa3.48□□□□□ -1.85
LINC01088-205ENST00000509088 DAD1P61803 113 aa3.48□□□□□ -1.85
LINC01088-205ENST00000509088 SNRPD3P62318 126 aaKnown RBP3.48□□□□□ -1.85
LINC01088-205ENST00000509088 CXCL6P80162 114 aa3.48□□□□□ -1.85
LINC01088-205ENST00000509088 FAM223AQ8IWN6 122 aa3.48□□□□□ -1.85
LINC01088-205ENST00000509088 TM2D3Q9BRN9 247 aa3.48□□□□□ -1.85
LINC01088-205ENST00000509088 PHLDA3Q9Y5J5 127 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms