RNA–Protein interactions for RNA: ENST00000508930.1

TRIM41-204, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 3,834 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-204ENST00000508930 C9orf85Q96MD7 179 aa10.6□□□□□ -0.71
TRIM41-204ENST00000508930 DUX5Q96PT3 197 aa10.6□□□□□ -0.71
TRIM41-204ENST00000508930 BLCAPP62952 87 aa10.59□□□□□ -0.71
TRIM41-204ENST00000508930 LMO4P61968 165 aa10.59□□□□□ -0.71
TRIM41-204ENST00000508930 CSPG4Q6UVK1 2322 aa10.59□□□□□ -0.71
TRIM41-204ENST00000508930 ZNF625Q96I27 306 aaPredicted RBP10.59□□□□□ -0.71
TRIM41-204ENST00000508930 ADORA2A-AS1P86434 159 aa10.58□□□□□ -0.72
TRIM41-204ENST00000508930 MRPL23Q16540 153 aaKnown RBP10.58□□□□□ -0.72
TRIM41-204ENST00000508930 NACAE9PAV3 2078 aa10.58□□□□□ -0.72
TRIM41-204ENST00000508930 FAM236AA0A1B0GUQ0 79 aa10.58□□□□□ -0.72
TRIM41-204ENST00000508930 FAM236BA0A1B0GV22 79 aa10.58□□□□□ -0.72
TRIM41-204ENST00000508930 LST1O00453 97 aa10.58□□□□□ -0.72
TRIM41-204ENST00000508930 COL12A1Q99715 3063 aa10.57□□□□□ -0.72
TRIM41-204ENST00000508930 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.57□□□□□ -0.72
TRIM41-204ENST00000508930 IGKV2-29A2NJV5 120 aaPredicted RBP10.57□□□□□ -0.72
TRIM41-204ENST00000508930 TMEM61Q8N0U2 210 aa10.57□□□□□ -0.72
TRIM41-204ENST00000508930 FAM110AQ9BQ89 295 aa10.57□□□□□ -0.72
TRIM41-204ENST00000508930 NOTCH3Q9UM47 2321 aa10.56□□□□□ -0.72
TRIM41-204ENST00000508930 SPANXDQ9BXN6 97 aa10.56□□□□□ -0.72
TRIM41-204ENST00000508930 SPANXCQ9NY87 97 aa10.56□□□□□ -0.72
TRIM41-204ENST00000508930 PROK1P58294 105 aa10.56□□□□□ -0.72
TRIM41-204ENST00000508930 VSIG2Q96IQ7 327 aa10.56□□□□□ -0.72
TRIM41-204ENST00000508930 H3BUA1 57 aa10.55□□□□□ -0.72
TRIM41-204ENST00000508930 MRPS36P82909 103 aaKnown RBP10.55□□□□□ -0.72
TRIM41-204ENST00000508930 DCANP1Q8TF63 244 aa10.55□□□□□ -0.72
TRIM41-204ENST00000508930 IGHV3-38A0A0C4DH36 116 aa10.55□□□□□ -0.72
TRIM41-204ENST00000508930 LITAFQ99732 161 aa10.55□□□□□ -0.72
TRIM41-204ENST00000508930 DCHS2Q6V1P9 2916 aa10.55□□□□□ -0.72
TRIM41-204ENST00000508930 IGHG2P01859 326 aa10.55□□□□□ -0.72
TRIM41-204ENST00000508930 A0A1W2PPR1 153 aa10.54□□□□□ -0.72
TRIM41-204ENST00000508930 K7ENP7 123 aa10.54□□□□□ -0.72
TRIM41-204ENST00000508930 C19orf54Q5BKX5 351 aa10.54□□□□□ -0.72
TRIM41-204ENST00000508930 C9orf153Q5TBE3 101 aa10.54□□□□□ -0.72
TRIM41-204ENST00000508930 PYGO1Q9Y3Y4 419 aa10.54□□□□□ -0.72
TRIM41-204ENST00000508930 FAM240AA0A1B0GVK7 77 aa10.53□□□□□ -0.72
TRIM41-204ENST00000508930 ATP5J2P56134 94 aa10.53□□□□□ -0.72
TRIM41-204ENST00000508930 IGHV4-38-2P0DP08 117 aa10.53□□□□□ -0.72
TRIM41-204ENST00000508930 K7EMT4 169 aa10.52□□□□□ -0.72
TRIM41-204ENST00000508930 TINCRA0A1B0GVN0 87 aa10.52□□□□□ -0.73
TRIM41-204ENST00000508930 CDKN2A-AS1Q9UH64 79 aa10.52□□□□□ -0.73
TRIM41-204ENST00000508930 C2CD3Q4AC94 2353 aa10.51□□□□□ -0.73
TRIM41-204ENST00000508930 TMEM126AQ9H061 195 aa10.51□□□□□ -0.73
TRIM41-204ENST00000508930 Q9H8V8 135 aa10.51□□□□□ -0.73
TRIM41-204ENST00000508930 PKD1L2Q7Z442 2459 aa10.51□□□□□ -0.73
TRIM41-204ENST00000508930 ACYP1P07311 99 aa10.51□□□□□ -0.73
TRIM41-204ENST00000508930 SYNJ2BPP57105 145 aa10.51□□□□□ -0.73
TRIM41-204ENST00000508930 LINC01600Q96MT4 127 aa10.49□□□□□ -0.73
TRIM41-204ENST00000508930 FASNP49327 2511 aaKnown RBP10.49□□□□□ -0.73
TRIM41-204ENST00000508930 BAALC-AS2P0C853 105 aa10.49□□□□□ -0.73
TRIM41-204ENST00000508930 KLRB1Q12918 225 aa10.49□□□□□ -0.73
TRIM41-204ENST00000508930 LINC00467Q9BRT7 94 aa10.49□□□□□ -0.73
TRIM41-204ENST00000508930 PTPN13Q12923 2485 aa10.49□□□□□ -0.73
TRIM41-204ENST00000508930 ASH1LQ9NR48 2969 aaKnown RBP10.48□□□□□ -0.73
TRIM41-204ENST00000508930 TRBV7-7A0A0K0K1E9 115 aa10.48□□□□□ -0.73
TRIM41-204ENST00000508930 PRM2P04554 102 aa10.48□□□□□ -0.73
TRIM41-204ENST00000508930 GAGE2AQ6NT46 116 aa10.48□□□□□ -0.73
TRIM41-204ENST00000508930 COPS9Q8WXC6 57 aa10.48□□□□□ -0.73
TRIM41-204ENST00000508930 A6NDX4 124 aa10.48□□□□□ -0.73
TRIM41-204ENST00000508930 K7EQG2 157 aa10.48□□□□□ -0.73
TRIM41-204ENST00000508930 COX7A2LO14548 114 aa10.48□□□□□ -0.73
TRIM41-204ENST00000508930 PRIMA1Q86XR5 153 aa10.48□□□□□ -0.73
TRIM41-204ENST00000508930 HIVEP3Q5T1R4 2406 aa10.47□□□□□ -0.73
TRIM41-204ENST00000508930 LINC00308Q8TCZ7 52 aa10.47□□□□□ -0.73
TRIM41-204ENST00000508930 DAZ2Q13117 558 aaKnown RBP10.47□□□□□ -0.73
TRIM41-204ENST00000508930 DAZ4Q86SG3 579 aaKnown RBP10.47□□□□□ -0.73
TRIM41-204ENST00000508930 LINC00643Q86TS7 51 aa10.47□□□□□ -0.73
TRIM41-204ENST00000508930 DAZ3Q9NR90 486 aaKnown RBP10.47□□□□□ -0.73
TRIM41-204ENST00000508930 Q9UF83 564 aa10.47□□□□□ -0.73
TRIM41-204ENST00000508930 UBE2D4Q9Y2X8 147 aa10.47□□□□□ -0.73
TRIM41-204ENST00000508930 TRAV13-1A0A0B4J241 112 aa10.47□□□□□ -0.73
TRIM41-204ENST00000508930 DEFB131AP59861 70 aa10.46□□□□□ -0.73
TRIM41-204ENST00000508930 PIMREGQ9BSJ6 248 aa10.46□□□□□ -0.73
TRIM41-204ENST00000508930 CENPEQ02224 2701 aa10.46□□□□□ -0.73
TRIM41-204ENST00000508930 TIMM17BO60830 172 aa10.46□□□□□ -0.73
TRIM41-204ENST00000508930 IGHV4-61A0A0C4DH41 118 aa10.46□□□□□ -0.74
TRIM41-204ENST00000508930 LINC01587Q99440 93 aa10.46□□□□□ -0.74
TRIM41-204ENST00000508930 NDUFA1O15239 70 aa10.45□□□□□ -0.74
TRIM41-204ENST00000508930 IGLV1-40P01703 118 aa10.45□□□□□ -0.74
TRIM41-204ENST00000508930 ZNF415Q09FC8 603 aa10.45□□□□□ -0.74
TRIM41-204ENST00000508930 DEFB121Q5J5C9 76 aa10.45□□□□□ -0.74
TRIM41-204ENST00000508930 C10orf99Q6UWK7 81 aa10.45□□□□□ -0.74
TRIM41-204ENST00000508930 NBL1P41271 181 aa10.45□□□□□ -0.74
TRIM41-204ENST00000508930 CHCHD7Q9BUK0 85 aa10.45□□□□□ -0.74
TRIM41-204ENST00000508930 IMUPQ9GZP8 106 aa10.45□□□□□ -0.74
TRIM41-204ENST00000508930 CITED2Q99967 270 aaPredicted RBP10.44□□□□□ -0.74
TRIM41-204ENST00000508930 EDA2RQ9HAV5 297 aa10.44□□□□□ -0.74
TRIM41-204ENST00000508930 C3orf22Q8N5N4 141 aa10.43□□□□□ -0.74
TRIM41-204ENST00000508930 MAP1AP78559 2803 aaPredicted RBP10.43□□□□□ -0.74
TRIM41-204ENST00000508930 RS1O15537 224 aa10.43□□□□□ -0.74
TRIM41-204ENST00000508930 Q6ZSN1 163 aa10.43□□□□□ -0.74
TRIM41-204ENST00000508930 DNAL4O96015 105 aa10.43□□□□□ -0.74
TRIM41-204ENST00000508930 HOXD3P31249 432 aaPredicted RBP10.43□□□□□ -0.74
TRIM41-204ENST00000508930 HERVK_113P63121 156 aa10.43□□□□□ -0.74
TRIM41-204ENST00000508930 BRI3O95415 125 aa10.42□□□□□ -0.74
TRIM41-204ENST00000508930 PPDPFQ9H3Y8 114 aa10.42□□□□□ -0.74
TRIM41-204ENST00000508930 IGHV3OR16-12A0A075B7B8 117 aa10.42□□□□□ -0.74
TRIM41-204ENST00000508930 INAFM2P0DMQ5 153 aa10.42□□□□□ -0.74
TRIM41-204ENST00000508930 FAM104AQ969W3 186 aa10.42□□□□□ -0.74
TRIM41-204ENST00000508930 SVEP1Q4LDE5 3571 aa10.42□□□□□ -0.74
TRIM41-204ENST00000508930 Q9HAA7 133 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 224 ms