RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 ZNF418Q8TF45 676 aaPredicted RBP8.1□□□□□ -1.11
SH3RF1-203ENST00000508685 PLEKHB2Q96CS7 222 aa8.1□□□□□ -1.11
SH3RF1-203ENST00000508685 ZNF256Q9Y2P7 627 aaPredicted RBP8.1□□□□□ -1.11
SH3RF1-203ENST00000508685 I3L3M4 83 aa8.1□□□□□ -1.11
SH3RF1-203ENST00000508685 LEPROTO15243 131 aa8.1□□□□□ -1.11
SH3RF1-203ENST00000508685 LGALS3P17931 250 aaKnown RBP8.1□□□□□ -1.11
SH3RF1-203ENST00000508685 CRYBA4P53673 196 aa8.1□□□□□ -1.11
SH3RF1-203ENST00000508685 UBE2D3P61077 147 aa8.1□□□□□ -1.11
SH3RF1-203ENST00000508685 UBE2D2P62837 147 aa8.1□□□□□ -1.11
SH3RF1-203ENST00000508685 ZNF56Q15929 161 aa8.1□□□□□ -1.11
SH3RF1-203ENST00000508685 SPINK13Q1W4C9 94 aa8.1□□□□□ -1.11
SH3RF1-203ENST00000508685 NDUFA11Q86Y39 141 aa8.1□□□□□ -1.11
SH3RF1-203ENST00000508685 MDFICQ9P1T7 246 aa8.1□□□□□ -1.11
SH3RF1-203ENST00000508685 TENM1Q9UKZ4 2725 aa8.09□□□□□ -1.11
SH3RF1-203ENST00000508685 J3QQQ9 107 aa8.09□□□□□ -1.11
SH3RF1-203ENST00000508685 FHL3Q13643 280 aa8.09□□□□□ -1.11
SH3RF1-203ENST00000508685 AMTNQ6UX39 209 aa8.09□□□□□ -1.11
SH3RF1-203ENST00000508685 SPAG8Q99932 426 aaPredicted RBP8.09□□□□□ -1.11
SH3RF1-203ENST00000508685 C16orf95Q9H693 158 aa8.09□□□□□ -1.11
SH3RF1-203ENST00000508685 JPT2Q9H910 190 aa8.09□□□□□ -1.11
SH3RF1-203ENST00000508685 VWFP04275 2813 aa8.09□□□□□ -1.11
SH3RF1-203ENST00000508685 CCL24O00175 119 aa8.08□□□□□ -1.12
SH3RF1-203ENST00000508685 TSPAN13O95857 204 aa8.08□□□□□ -1.12
SH3RF1-203ENST00000508685 IGHV3-30P01768 117 aa8.08□□□□□ -1.12
SH3RF1-203ENST00000508685 IGHV3-30-5P0DP03 117 aa8.08□□□□□ -1.12
SH3RF1-203ENST00000508685 DEFB131AP59861 70 aa8.08□□□□□ -1.12
SH3RF1-203ENST00000508685 RPL39P62891 51 aaKnown RBP8.08□□□□□ -1.12
SH3RF1-203ENST00000508685 PIK3CD-AS1Q5SR53 167 aa8.08□□□□□ -1.12
SH3RF1-203ENST00000508685 CFAP126Q5VTH2 177 aa8.08□□□□□ -1.12
SH3RF1-203ENST00000508685 Q8N1Y9 231 aa8.08□□□□□ -1.12
SH3RF1-203ENST00000508685 DYNLRB2Q8TF09 96 aa8.08□□□□□ -1.12
SH3RF1-203ENST00000508685 KNCNA6PVL3 124 aa8.08□□□□□ -1.12
SH3RF1-203ENST00000508685 APOMO95445 188 aa8.08□□□□□ -1.12
SH3RF1-203ENST00000508685 DEFB114Q30KQ6 69 aa8.08□□□□□ -1.12
SH3RF1-203ENST00000508685 FAM74A4Q5TZK3 123 aa8.08□□□□□ -1.12
SH3RF1-203ENST00000508685 C20orf203Q8NBC4 194 aa8.08□□□□□ -1.12
SH3RF1-203ENST00000508685 C1QTNF4Q9BXJ3 329 aa8.08□□□□□ -1.12
SH3RF1-203ENST00000508685 PYGO1Q9Y3Y4 419 aa8.08□□□□□ -1.12
SH3RF1-203ENST00000508685 TSSC4Q9Y5U2 329 aaPredicted RBP8.08□□□□□ -1.12
SH3RF1-203ENST00000508685 TMEM223A0PJW6 202 aa8.07□□□□□ -1.12
SH3RF1-203ENST00000508685 AZU1P20160 251 aa8.07□□□□□ -1.12
SH3RF1-203ENST00000508685 SH2D6Q7Z4S9 175 aa8.07□□□□□ -1.12
SH3RF1-203ENST00000508685 C10orf126Q8N4M7 172 aa8.07□□□□□ -1.12
SH3RF1-203ENST00000508685 ZNRF2Q8NHG8 242 aa8.07□□□□□ -1.12
SH3RF1-203ENST00000508685 LOC107984156A0A0G2JMH3 177 aa8.07□□□□□ -1.12
SH3RF1-203ENST00000508685 ARL17AQ8IVW1 177 aa8.07□□□□□ -1.12
SH3RF1-203ENST00000508685 PRO1854Q9UHT4 67 aa8.07□□□□□ -1.12
SH3RF1-203ENST00000508685 TRAV2A0A0B4J234 112 aa8.06□□□□□ -1.12
SH3RF1-203ENST00000508685 PSMB2P49721 201 aa8.06□□□□□ -1.12
SH3RF1-203ENST00000508685 FOXI1Q12951 378 aa8.06□□□□□ -1.12
SH3RF1-203ENST00000508685 PTH2Q96A98 100 aa8.06□□□□□ -1.12
SH3RF1-203ENST00000508685 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.05□□□□□ -1.12
SH3RF1-203ENST00000508685 M0QXV9 152 aa8.05□□□□□ -1.12
SH3RF1-203ENST00000508685 CFC1BP0CG36 223 aa8.05□□□□□ -1.12
SH3RF1-203ENST00000508685 CFC1P0CG37 223 aa8.05□□□□□ -1.12
SH3RF1-203ENST00000508685 AMELXQ99217 191 aa8.05□□□□□ -1.12
SH3RF1-203ENST00000508685 MAP6D1Q9H9H5 199 aa8.05□□□□□ -1.12
SH3RF1-203ENST00000508685 ATRQ13535 2644 aa8.05□□□□□ -1.12
SH3RF1-203ENST00000508685 RHODO00212 210 aa8.05□□□□□ -1.12
SH3RF1-203ENST00000508685 RBMY1A1P0DJD3 496 aaKnown RBP8.05□□□□□ -1.12
SH3RF1-203ENST00000508685 RBMY1CP0DJD4 496 aa8.05□□□□□ -1.12
SH3RF1-203ENST00000508685 P0DMU3 169 aa8.05□□□□□ -1.12
SH3RF1-203ENST00000508685 FAM231AP0DMU4 169 aa8.05□□□□□ -1.12
SH3RF1-203ENST00000508685 FAM231CP0DMU5 169 aa8.05□□□□□ -1.12
SH3RF1-203ENST00000508685 EMP1P54849 157 aa8.05□□□□□ -1.12
SH3RF1-203ENST00000508685 PROK1P58294 105 aa8.05□□□□□ -1.12
SH3RF1-203ENST00000508685 RBMY1FQ15415 496 aaKnown RBP8.05□□□□□ -1.12
SH3RF1-203ENST00000508685 SBSPONQ8IVN8 264 aa8.05□□□□□ -1.12
SH3RF1-203ENST00000508685 A0A0B4J2C4 111 aa8.04□□□□□ -1.12
SH3RF1-203ENST00000508685 RBMY1BA6NDE4 496 aaKnown RBP8.04□□□□□ -1.12
SH3RF1-203ENST00000508685 RBMY1EA6NEQ0 496 aaKnown RBP8.04□□□□□ -1.12
SH3RF1-203ENST00000508685 A8MWV9 139 aa8.04□□□□□ -1.12
SH3RF1-203ENST00000508685 H3BMM0 161 aa8.04□□□□□ -1.12
SH3RF1-203ENST00000508685 RBMY1DP0C7P1 496 aaKnown RBP8.04□□□□□ -1.12
SH3RF1-203ENST00000508685 PRIMA1Q86XR5 153 aa8.04□□□□□ -1.12
SH3RF1-203ENST00000508685 PPDPFLQ8WWR9 84 aa8.04□□□□□ -1.12
SH3RF1-203ENST00000508685 GTSF1LQ9H1H1 148 aa8.04□□□□□ -1.12
SH3RF1-203ENST00000508685 A8MTW9 85 aa8.03□□□□□ -1.12
SH3RF1-203ENST00000508685 ADARB2-AS1A8MUL3 147 aa8.03□□□□□ -1.12
SH3RF1-203ENST00000508685 SCGB1C2P0DMR2 95 aa8.03□□□□□ -1.12
SH3RF1-203ENST00000508685 TSPEAR-AS2P59090 65 aa8.03□□□□□ -1.12
SH3RF1-203ENST00000508685 TEN1Q86WV5 123 aa8.03□□□□□ -1.12
SH3RF1-203ENST00000508685 IGLV4-3A0A075B6K6 122 aa8.03□□□□□ -1.12
SH3RF1-203ENST00000508685 NDUFA7O95182 113 aa8.03□□□□□ -1.12
SH3RF1-203ENST00000508685 ZNF22P17026 224 aaPredicted RBP8.03□□□□□ -1.12
SH3RF1-203ENST00000508685 KRTAP21-3Q3LHN1 58 aa8.03□□□□□ -1.12
SH3RF1-203ENST00000508685 ODF3L2Q3SX64 289 aa8.03□□□□□ -1.12
SH3RF1-203ENST00000508685 CIDEAO60543 219 aa8.02□□□□□ -1.13
SH3RF1-203ENST00000508685 HTN1P15515 57 aa8.02□□□□□ -1.13
SH3RF1-203ENST00000508685 SMCPP49901 116 aaPredicted RBP8.02□□□□□ -1.13
SH3RF1-203ENST00000508685 PRM2P04554 102 aa8.02□□□□□ -1.13
SH3RF1-203ENST00000508685 KRTAP10-3P60369 221 aa8.02□□□□□ -1.13
SH3RF1-203ENST00000508685 MRPS36P82909 103 aaKnown RBP8.02□□□□□ -1.13
SH3RF1-203ENST00000508685 SMAGPQ0VAQ4 97 aa8.02□□□□□ -1.13
SH3RF1-203ENST00000508685 DNAJC30Q96LL9 226 aa8.02□□□□□ -1.13
SH3RF1-203ENST00000508685 LINC00467Q9BRT7 94 aa8.02□□□□□ -1.13
SH3RF1-203ENST00000508685 ERG28Q9UKR5 140 aa8.02□□□□□ -1.13
SH3RF1-203ENST00000508685 TNFRSF18Q9Y5U5 241 aa8.02□□□□□ -1.13
SH3RF1-203ENST00000508685 M0R2P5 195 aa8.01□□□□□ -1.13
SH3RF1-203ENST00000508685 TCL1BO95988 128 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 148.3 ms