RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 C20orf202A1L168 122 aa11.35□□□□□ -0.59
LMNA-217ENST00000498722 SDHAF1A6NFY7 115 aa11.35□□□□□ -0.59
LMNA-217ENST00000498722 LINC01549A6NIU2 74 aa11.35□□□□□ -0.59
LMNA-217ENST00000498722 IGHV3-53P01767 116 aa11.35□□□□□ -0.59
LMNA-217ENST00000498722 LINC00612Q8N6U2 182 aa11.35□□□□□ -0.59
LMNA-217ENST00000498722 DYNC2H1Q8NCM8 4307 aaKnown RBP11.34□□□□□ -0.59
LMNA-217ENST00000498722 TRBV27A0A0K0K1C4 114 aa11.34□□□□□ -0.59
LMNA-217ENST00000498722 SYS1-DBNDD2H3BUS1 97 aa11.34□□□□□ -0.59
LMNA-217ENST00000498722 NUDT3O95989 172 aa11.34□□□□□ -0.59
LMNA-217ENST00000498722 LGALS9CQ6DKI2 356 aa11.34□□□□□ -0.59
LMNA-217ENST00000498722 PET117Q6UWS5 81 aa11.34□□□□□ -0.59
LMNA-217ENST00000498722 TNFRSF18Q9Y5U5 241 aa11.33□□□□□ -0.6
LMNA-217ENST00000498722 ALMS1Q8TCU4 4167 aa11.33□□□□□ -0.6
LMNA-217ENST00000498722 ATP5LO75964 103 aa11.32□□□□□ -0.6
LMNA-217ENST00000498722 CDPF1Q6NVV7 123 aa11.32□□□□□ -0.6
LMNA-217ENST00000498722 LINC00173Q6ZV60 143 aa11.32□□□□□ -0.6
LMNA-217ENST00000498722 SPATA12Q7Z6I5 190 aa11.32□□□□□ -0.6
LMNA-217ENST00000498722 IFI27L1Q96BM0 104 aa11.32□□□□□ -0.6
LMNA-217ENST00000498722 A0A0J9YY99 117 aa11.31□□□□□ -0.6
LMNA-217ENST00000498722 I3L3M4 83 aa11.31□□□□□ -0.6
LMNA-217ENST00000498722 RHOHQ15669 191 aa11.31□□□□□ -0.6
LMNA-217ENST00000498722 TEX43Q6ZNM6 134 aa11.31□□□□□ -0.6
LMNA-217ENST00000498722 UBE2DNLQ8IWF7 75 aa11.31□□□□□ -0.6
LMNA-217ENST00000498722 Q8N976 141 aa11.31□□□□□ -0.6
LMNA-217ENST00000498722 C15orf53Q8NAA6 179 aa11.31□□□□□ -0.6
LMNA-217ENST00000498722 PLECQ15149 4684 aaKnown RBP11.3□□□□□ -0.6
LMNA-217ENST00000498722 TRAV26-1A0A087WT03 109 aa11.3□□□□□ -0.6
LMNA-217ENST00000498722 TRBV10-1A0A0K0K1A3 114 aa11.3□□□□□ -0.6
LMNA-217ENST00000498722 P0DMU3 169 aa11.3□□□□□ -0.6
LMNA-217ENST00000498722 FAM231AP0DMU4 169 aa11.3□□□□□ -0.6
LMNA-217ENST00000498722 FAM231CP0DMU5 169 aa11.3□□□□□ -0.6
LMNA-217ENST00000498722 TOMM6Q96B49 74 aa11.3□□□□□ -0.6
LMNA-217ENST00000498722 ZNF479Q96JC4 524 aa11.3□□□□□ -0.6
LMNA-217ENST00000498722 NEXN-AS1Q8NBZ9 246 aa11.29□□□□□ -0.6
LMNA-217ENST00000498722 C18orf15Q96N68 181 aa11.29□□□□□ -0.6
LMNA-217ENST00000498722 K7EQD1 137 aa11.28□□□□□ -0.6
LMNA-217ENST00000498722 C2orf66Q6UXQ4 117 aa11.28□□□□□ -0.6
LMNA-217ENST00000498722 Q6ZSN1 163 aa11.28□□□□□ -0.6
LMNA-217ENST00000498722 CYSLTR1Q9Y271 337 aa11.28□□□□□ -0.6
LMNA-217ENST00000498722 LINC01545Q5VT33 79 aa11.27□□□□□ -0.61
LMNA-217ENST00000498722 NEGR1Q7Z3B1 354 aa11.27□□□□□ -0.61
LMNA-217ENST00000498722 VAMP8Q9BV40 100 aa11.27□□□□□ -0.61
LMNA-217ENST00000498722 TRGV4A0A0C4DH28 118 aa11.26□□□□□ -0.61
LMNA-217ENST00000498722 H0Y8G0 127 aa11.26□□□□□ -0.61
LMNA-217ENST00000498722 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.26□□□□□ -0.61
LMNA-217ENST00000498722 PKIAP61925 76 aa11.26□□□□□ -0.61
LMNA-217ENST00000498722 RPL36AP83881 106 aaKnown RBP11.26□□□□□ -0.61
LMNA-217ENST00000498722 RPL36ALQ969Q0 106 aaKnown RBP11.26□□□□□ -0.61
LMNA-217ENST00000498722 SCGB3A1Q96QR1 104 aa11.26□□□□□ -0.61
LMNA-217ENST00000498722 TRBV6-4A0A1B0GX49 114 aa11.25□□□□□ -0.61
LMNA-217ENST00000498722 TSTD3H0UI37 97 aa11.25□□□□□ -0.61
LMNA-217ENST00000498722 TSHBP01222 138 aa11.25□□□□□ -0.61
LMNA-217ENST00000498722 Q6ZN92 141 aa11.25□□□□□ -0.61
LMNA-217ENST00000498722 DNAH1Q9P2D7 4330 aa11.24□□□□□ -0.61
LMNA-217ENST00000498722 TRBV7-3A0A075B6L6 115 aa11.24□□□□□ -0.61
LMNA-217ENST00000498722 PRSS1P07477 247 aa11.24□□□□□ -0.61
LMNA-217ENST00000498722 ERASQ7Z444 233 aa11.24□□□□□ -0.61
LMNA-217ENST00000498722 SACSQ9NZJ4 4579 aa11.23□□□□□ -0.61
LMNA-217ENST00000498722 PAX4O43316 350 aa11.23□□□□□ -0.61
LMNA-217ENST00000498722 ZNF664Q8N3J9 261 aa11.23□□□□□ -0.61
LMNA-217ENST00000498722 SLC25A29Q8N8R3 303 aa11.23□□□□□ -0.61
LMNA-217ENST00000498722 ZNRF2Q8NHG8 242 aa11.23□□□□□ -0.61
LMNA-217ENST00000498722 TMEM141Q96I45 108 aa11.23□□□□□ -0.61
LMNA-217ENST00000498722 PRADC1Q9BSG0 188 aa11.23□□□□□ -0.61
LMNA-217ENST00000498722 HHLA3Q9XRX5 114 aa11.23□□□□□ -0.61
LMNA-217ENST00000498722 TRAV9-2A0A087WT02 112 aa11.22□□□□□ -0.61
LMNA-217ENST00000498722 PCP4L1A6NKN8 68 aa11.22□□□□□ -0.61
LMNA-217ENST00000498722 COTL1Q14019 142 aa11.22□□□□□ -0.61
LMNA-217ENST00000498722 FHL2Q14192 279 aa11.22□□□□□ -0.61
LMNA-217ENST00000498722 DAZ4Q86SG3 579 aaKnown RBP11.22□□□□□ -0.61
LMNA-217ENST00000498722 TIMM17AQ99595 171 aa11.22□□□□□ -0.61
LMNA-217ENST00000498722 DAZ3Q9NR90 486 aaKnown RBP11.22□□□□□ -0.61
LMNA-217ENST00000498722 PRO0255Q9UI72 69 aa11.22□□□□□ -0.61
LMNA-217ENST00000498722 RYR2Q92736 4967 aa11.21□□□□□ -0.61
LMNA-217ENST00000498722 TRAV12-1A0A0B4J245 112 aa11.21□□□□□ -0.61
LMNA-217ENST00000498722 HSBP1L1C9JCN9 74 aa11.21□□□□□ -0.61
LMNA-217ENST00000498722 H3BNG1 76 aa11.21□□□□□ -0.61
LMNA-217ENST00000498722 CCL18P55774 89 aa11.21□□□□□ -0.61
LMNA-217ENST00000498722 C20orf203Q8NBC4 194 aa11.21□□□□□ -0.61
LMNA-217ENST00000498722 VSIG2Q96IQ7 327 aa11.21□□□□□ -0.61
LMNA-217ENST00000498722 PAM16Q9Y3D7 125 aa11.21□□□□□ -0.61
LMNA-217ENST00000498722 HYDINQ4G0P3 5121 aa11.2□□□□□ -0.62
LMNA-217ENST00000498722 CRYBA4P53673 196 aa11.2□□□□□ -0.62
LMNA-217ENST00000498722 SPATA45Q537H7 98 aa11.2□□□□□ -0.62
LMNA-217ENST00000498722 ATOH7Q8N100 152 aa11.2□□□□□ -0.62
LMNA-217ENST00000498722 ICOSQ9Y6W8 199 aa11.2□□□□□ -0.62
LMNA-217ENST00000498722 UBE2D3P61077 147 aa11.19□□□□□ -0.62
LMNA-217ENST00000498722 UBE2D2P62837 147 aa11.19□□□□□ -0.62
LMNA-217ENST00000498722 A0A087WX48 190 aa11.18□□□□□ -0.62
LMNA-217ENST00000498722 GAGE12JA6NER3 117 aa11.18□□□□□ -0.62
LMNA-217ENST00000498722 IGIPA6NJ69 53 aa11.18□□□□□ -0.62
LMNA-217ENST00000498722 NPSP0C0P6 89 aa11.18□□□□□ -0.62
LMNA-217ENST00000498722 GAGE1Q13065 139 aa11.18□□□□□ -0.62
LMNA-217ENST00000498722 GAGE4Q13068 117 aa11.18□□□□□ -0.62
LMNA-217ENST00000498722 GAGE5Q13069 117 aa11.18□□□□□ -0.62
LMNA-217ENST00000498722 ODF1Q14990 250 aa11.18□□□□□ -0.62
LMNA-217ENST00000498722 GAGE13Q4V321 117 aa11.18□□□□□ -0.62
LMNA-217ENST00000498722 PRO1933Q9H354 126 aa11.18□□□□□ -0.62
LMNA-217ENST00000498722 Q9UF83 564 aa11.18□□□□□ -0.62
LMNA-217ENST00000498722 A0A096LPF7 62 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms