RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, humanhuman

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-222ENST00000485567 CDC42SE2Q9NRR3 84 aa1.8□□□□□ -2.12
FN1-222ENST00000485567 NDUFA4L2Q9NRX3 87 aa1.8□□□□□ -2.12
FN1-222ENST00000485567 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.8□□□□□ -2.12
FN1-222ENST00000485567 UNC13BO14795 1591 aa1.8□□□□□ -2.12
FN1-222ENST00000485567 TET3O43151 1660 aa1.8□□□□□ -2.12
FN1-222ENST00000485567 COL4A6Q14031 1691 aa1.8□□□□□ -2.12
FN1-222ENST00000485567 ZC3H13Q5T200 1668 aaKnown RBP1.8□□□□□ -2.12
FN1-222ENST00000485567 PPLO60437 1756 aa1.8□□□□□ -2.12
FN1-222ENST00000485567 COL5A1P20908 1838 aaPredicted RBP1.8□□□□□ -2.12
FN1-222ENST00000485567 MYH8P13535 1937 aa1.79□□□□□ -2.12
FN1-222ENST00000485567 TRBV6-7A0A0A0MS04 114 aa1.79□□□□□ -2.12
FN1-222ENST00000485567 TMEM14DPA8MWL7 114 aa1.79□□□□□ -2.12
FN1-222ENST00000485567 RNASE3P12724 160 aaKnown RBP1.79□□□□□ -2.12
FN1-222ENST00000485567 PDE6GP18545 87 aa1.79□□□□□ -2.12
FN1-222ENST00000485567 KRTAP13-1Q8IUC0 172 aa1.79□□□□□ -2.12
FN1-222ENST00000485567 MYOFQ9NZM1 2061 aa1.79□□□□□ -2.12
FN1-222ENST00000485567 HIVEP2P31629 2446 aa1.78□□□□□ -2.12
FN1-222ENST00000485567 RGPD4Q7Z3J3 1758 aa1.78□□□□□ -2.12
FN1-222ENST00000485567 TRBV25-1A0A075B6N4 114 aa1.78□□□□□ -2.12
FN1-222ENST00000485567 LOC101927531A0A1B0GV80 90 aa1.78□□□□□ -2.12
FN1-222ENST00000485567 JMJD7-PLA2G4BH0Y9G9 81 aa1.78□□□□□ -2.12
FN1-222ENST00000485567 HMGN4O00479 90 aa1.78□□□□□ -2.12
FN1-222ENST00000485567 BCE1O60756 84 aa1.78□□□□□ -2.12
FN1-222ENST00000485567 COX6CP09669 75 aa1.78□□□□□ -2.12
FN1-222ENST00000485567 HMGN3Q15651 99 aa1.78□□□□□ -2.12
FN1-222ENST00000485567 C10orf55Q5SWW7 151 aa1.78□□□□□ -2.12
FN1-222ENST00000485567 LINC00643Q86TS7 51 aa1.78□□□□□ -2.12
FN1-222ENST00000485567 WFDC10AQ9H1F0 79 aa1.78□□□□□ -2.12
FN1-222ENST00000485567 DYNLRB1Q9NP97 96 aa1.78□□□□□ -2.12
FN1-222ENST00000485567 PATJQ8NI35 1801 aa1.77□□□□□ -2.13
FN1-222ENST00000485567 LAMB2P55268 1798 aa1.77□□□□□ -2.13
FN1-222ENST00000485567 ABCA8O94911 1581 aa1.77□□□□□ -2.13
FN1-222ENST00000485567 NEXMIFQ5QGS0 1516 aa1.77□□□□□ -2.13
FN1-222ENST00000485567 HFM1A2PYH4 1435 aa1.77□□□□□ -2.13
FN1-222ENST00000485567 IGKV3D-7A0A0C4DH55 119 aa1.77□□□□□ -2.13
FN1-222ENST00000485567 IGKV3OR2-268A0A0C4DH90 116 aa1.77□□□□□ -2.13
FN1-222ENST00000485567 HIGD1CA8MV81 97 aa1.77□□□□□ -2.13
FN1-222ENST00000485567 F8WEM9 126 aa1.77□□□□□ -2.13
FN1-222ENST00000485567 H3BRN7 92 aa1.77□□□□□ -2.13
FN1-222ENST00000485567 PPP1R17O96001 155 aa1.77□□□□□ -2.13
FN1-222ENST00000485567 SSBP1Q04837 148 aaKnown RBP1.77□□□□□ -2.13
FN1-222ENST00000485567 HEATR1Q9H583 2144 aaKnown RBP1.77□□□□□ -2.13
FN1-222ENST00000485567 TMEM14BQ9NUH8 114 aa1.77□□□□□ -2.13
FN1-222ENST00000485567 PSENENQ9NZ42 101 aa1.77□□□□□ -2.13
FN1-222ENST00000485567 COL4A2P08572 1712 aa1.77□□□□□ -2.13
FN1-222ENST00000485567 IQGAP3Q86VI3 1631 aa1.77□□□□□ -2.13
FN1-222ENST00000485567 MADDQ8WXG6 1647 aa1.77□□□□□ -2.13
FN1-222ENST00000485567 UNC13CQ8NB66 2214 aa1.76□□□□□ -2.13
FN1-222ENST00000485567 NINQ8N4C6 2090 aa1.76□□□□□ -2.13
FN1-222ENST00000485567 BLMP54132 1417 aaPredicted RBP1.76□□□□□ -2.13
FN1-222ENST00000485567 FAM223BA6NKX1 122 aa1.76□□□□□ -2.13
FN1-222ENST00000485567 IQCF6A8MYZ5 107 aa1.76□□□□□ -2.13
FN1-222ENST00000485567 ACYP1P07311 99 aa1.76□□□□□ -2.13
FN1-222ENST00000485567 IL9P15248 144 aa1.76□□□□□ -2.13
FN1-222ENST00000485567 CCL3L1P16619 93 aa1.76□□□□□ -2.13
FN1-222ENST00000485567 SMIM11AP58511 58 aa1.76□□□□□ -2.13
FN1-222ENST00000485567 ELOF1P60002 83 aaKnown RBP1.76□□□□□ -2.13
FN1-222ENST00000485567 TMEM170BQ5T4T1 132 aa1.76□□□□□ -2.13
FN1-222ENST00000485567 TTTY12Q9BZ98 90 aa1.76□□□□□ -2.13
FN1-222ENST00000485567 KLK9Q9UKQ9 250 aa1.76□□□□□ -2.13
FN1-222ENST00000485567 LENEPQ9Y5L5 61 aa1.76□□□□□ -2.13
FN1-222ENST00000485567 CTTNBP2Q8WZ74 1663 aa1.76□□□□□ -2.13
FN1-222ENST00000485567 KDM6BO15054 1643 aa1.76□□□□□ -2.13
FN1-222ENST00000485567 HMGXB3Q12766 1538 aa1.76□□□□□ -2.13
FN1-222ENST00000485567 PTPRDP23468 1912 aa1.76□□□□□ -2.13
FN1-222ENST00000485567 RGPD3A6NKT7 1758 aaPredicted RBP1.75□□□□□ -2.13
FN1-222ENST00000485567 SUPT6HQ7KZ85 1726 aaKnown RBP1.75□□□□□ -2.13
FN1-222ENST00000485567 MPDZO75970 2070 aa1.75□□□□□ -2.13
FN1-222ENST00000485567 NBDYA0A0U1RRE5 68 aa1.75□□□□□ -2.13
FN1-222ENST00000485567 C7orf77A4D0Y5 90 aa1.75□□□□□ -2.13
FN1-222ENST00000485567 ZNF815PA8K554 130 aa1.75□□□□□ -2.13
FN1-222ENST00000485567 DNAL4O96015 105 aa1.75□□□□□ -2.13
FN1-222ENST00000485567 HMGN2P05204 90 aaKnown RBP1.75□□□□□ -2.13
FN1-222ENST00000485567 SMIM13P0DJ93 91 aa1.75□□□□□ -2.13
FN1-222ENST00000485567 SPAG11BQ08648 103 aa1.75□□□□□ -2.13
FN1-222ENST00000485567 SPAG11AQ6PDA7 123 aa1.75□□□□□ -2.13
FN1-222ENST00000485567 COX7B2Q8TF08 81 aa1.75□□□□□ -2.13
FN1-222ENST00000485567 PROK2Q9HC23 129 aa1.75□□□□□ -2.13
FN1-222ENST00000485567 ARL2-SNX15V9GYD0 113 aa1.75□□□□□ -2.13
FN1-222ENST00000485567 TOP2BQ02880 1626 aa1.75□□□□□ -2.13
FN1-222ENST00000485567 MAP3K4Q9Y6R4 1608 aa1.75□□□□□ -2.13
FN1-222ENST00000485567 CASP8AP2Q9UKL3 1982 aa1.75□□□□□ -2.13
FN1-222ENST00000485567 CFAP74Q9C0B2 1584 aa1.75□□□□□ -2.13
FN1-222ENST00000485567 DUOX2Q9NRD8 1548 aa1.75□□□□□ -2.13
FN1-222ENST00000485567 KIF20BQ96Q89 1820 aa1.75□□□□□ -2.13
FN1-222ENST00000485567 PEAK1Q9H792 1746 aa1.74□□□□□ -2.13
FN1-222ENST00000485567 NWD2Q9ULI1 1742 aa1.74□□□□□ -2.13
FN1-222ENST00000485567 KIAA0100Q14667 2235 aaKnown RBP1.74□□□□□ -2.13
FN1-222ENST00000485567 MYO3AQ8NEV4 1616 aa1.74□□□□□ -2.13
FN1-222ENST00000485567 UMAD1C9J7I0 102 aa1.74□□□□□ -2.13
FN1-222ENST00000485567 RPL37AP61513 92 aaKnown RBP1.74□□□□□ -2.13
FN1-222ENST00000485567 PSMG4Q5JS54 123 aa1.74□□□□□ -2.13
FN1-222ENST00000485567 TXNDC17Q9BRA2 123 aa1.74□□□□□ -2.13
FN1-222ENST00000485567 V9GYH0 126 aa1.74□□□□□ -2.13
FN1-222ENST00000485567 CR1P17927 2039 aa1.74□□□□□ -2.13
FN1-222ENST00000485567 MRC1P22897 1456 aa1.74□□□□□ -2.13
FN1-222ENST00000485567 EEA1Q15075 1411 aa1.74□□□□□ -2.13
FN1-222ENST00000485567 PPRC1Q5VV67 1664 aaKnown RBP1.74□□□□□ -2.13
FN1-222ENST00000485567 MROH1Q8NDA8 1641 aa1.73□□□□□ -2.13
FN1-222ENST00000485567 TANC1Q9C0D5 1861 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms