RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 PRSS1P07477 247 aa4.98□□□□□ -1.61
BRCA1-216ENST00000484087 LINC00315P59091 139 aa4.98□□□□□ -1.61
BRCA1-216ENST00000484087 LGALS9BQ3B8N2 356 aa4.98□□□□□ -1.61
BRCA1-216ENST00000484087 LINC01545Q5VT33 79 aa4.98□□□□□ -1.61
BRCA1-216ENST00000484087 LGALS9CQ6DKI2 356 aa4.98□□□□□ -1.61
BRCA1-216ENST00000484087 KRTAP5-3Q6L8H2 238 aa4.98□□□□□ -1.61
BRCA1-216ENST00000484087 ATOH7Q8N100 152 aa4.98□□□□□ -1.61
BRCA1-216ENST00000484087 C1orf158Q8N1D5 194 aa4.98□□□□□ -1.61
BRCA1-216ENST00000484087 TMEM263Q8WUH6 116 aaKnown RBP4.98□□□□□ -1.61
BRCA1-216ENST00000484087 C16orf74Q96GX8 76 aa4.98□□□□□ -1.61
BRCA1-216ENST00000484087 C18orf15Q96N68 181 aa4.98□□□□□ -1.61
BRCA1-216ENST00000484087 JPT2Q9H910 190 aa4.98□□□□□ -1.61
BRCA1-216ENST00000484087 ALMS1Q8TCU4 4167 aa4.97□□□□□ -1.61
BRCA1-216ENST00000484087 SDHAF1A6NFY7 115 aa4.97□□□□□ -1.61
BRCA1-216ENST00000484087 LINC00587B1AMM8 73 aa4.97□□□□□ -1.61
BRCA1-216ENST00000484087 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.97□□□□□ -1.61
BRCA1-216ENST00000484087 MALP21145 153 aa4.97□□□□□ -1.61
BRCA1-216ENST00000484087 RRN3P1Q2M238 152 aa4.97□□□□□ -1.61
BRCA1-216ENST00000484087 Q6ZN92 141 aa4.97□□□□□ -1.61
BRCA1-216ENST00000484087 C11orf72Q8NBR9 251 aa4.97□□□□□ -1.61
BRCA1-216ENST00000484087 SCGB3A1Q96QR1 104 aa4.97□□□□□ -1.61
BRCA1-216ENST00000484087 MIEN1Q9BRT3 115 aa4.97□□□□□ -1.61
BRCA1-216ENST00000484087 UQCR10Q9UDW1 63 aa4.97□□□□□ -1.61
BRCA1-216ENST00000484087 TRGV1A0A0A0MS02 117 aa4.96□□□□□ -1.62
BRCA1-216ENST00000484087 M0QY20 66 aa4.96□□□□□ -1.62
BRCA1-216ENST00000484087 GIG44P09565 113 aaPredicted RBP4.96□□□□□ -1.62
BRCA1-216ENST00000484087 AZU1P20160 251 aa4.96□□□□□ -1.62
BRCA1-216ENST00000484087 POLR2KP53803 58 aaKnown RBP4.96□□□□□ -1.62
BRCA1-216ENST00000484087 APOC4P55056 127 aa4.96□□□□□ -1.62
BRCA1-216ENST00000484087 ZFP2Q6ZN57 461 aa4.96□□□□□ -1.62
BRCA1-216ENST00000484087 MRPL16Q9NX20 251 aaKnown RBP4.96□□□□□ -1.62
BRCA1-216ENST00000484087 CYSLTR1Q9Y271 337 aa4.96□□□□□ -1.62
BRCA1-216ENST00000484087 TNFRSF18Q9Y5U5 241 aa4.96□□□□□ -1.62
BRCA1-216ENST00000484087 DNAH1Q9P2D7 4330 aa4.96□□□□□ -1.62
BRCA1-216ENST00000484087 EPPK1P58107 5090 aaKnown RBP4.96□□□□□ -1.62
BRCA1-216ENST00000484087 TRBV27A0A0K0K1C4 114 aa4.95□□□□□ -1.62
BRCA1-216ENST00000484087 C3orf84H3BNL1 204 aa4.95□□□□□ -1.62
BRCA1-216ENST00000484087 I3L3M4 83 aa4.95□□□□□ -1.62
BRCA1-216ENST00000484087 RS1O15537 224 aa4.95□□□□□ -1.62
BRCA1-216ENST00000484087 CIDEAO60543 219 aa4.95□□□□□ -1.62
BRCA1-216ENST00000484087 RHOHQ15669 191 aa4.95□□□□□ -1.62
BRCA1-216ENST00000484087 CFAP126Q5VTH2 177 aa4.95□□□□□ -1.62
BRCA1-216ENST00000484087 C2orf66Q6UXQ4 117 aa4.95□□□□□ -1.62
BRCA1-216ENST00000484087 OR4C5Q8NGB2 326 aa4.95□□□□□ -1.62
BRCA1-216ENST00000484087 RNASE8Q8TDE3 154 aaKnown RBP4.95□□□□□ -1.62
BRCA1-216ENST00000484087 TOMM6Q96B49 74 aa4.95□□□□□ -1.62
BRCA1-216ENST00000484087 RNF183Q96D59 192 aa4.95□□□□□ -1.62
BRCA1-216ENST00000484087 DNAJC30Q96LL9 226 aa4.95□□□□□ -1.62
BRCA1-216ENST00000484087 IGHV3-73A0A0B4J1V6 119 aa4.94□□□□□ -1.62
BRCA1-216ENST00000484087 IGHV3-53P01767 116 aa4.94□□□□□ -1.62
BRCA1-216ENST00000484087 PRM2P04554 102 aa4.94□□□□□ -1.62
BRCA1-216ENST00000484087 IGLC3P0DOY3 106 aa4.94□□□□□ -1.62
BRCA1-216ENST00000484087 DAZ2Q13117 558 aaKnown RBP4.94□□□□□ -1.62
BRCA1-216ENST00000484087 ERASQ7Z444 233 aa4.94□□□□□ -1.62
BRCA1-216ENST00000484087 OR11H2Q8NH07 326 aa4.94□□□□□ -1.62
BRCA1-216ENST00000484087 IL17DQ8TAD2 202 aa4.94□□□□□ -1.62
BRCA1-216ENST00000484087 PMCHL2Q9BQD1 86 aa4.94□□□□□ -1.62
BRCA1-216ENST00000484087 A0A087WX48 190 aa4.94□□□□□ -1.62
BRCA1-216ENST00000484087 TRAV12-1A0A0B4J245 112 aa4.94□□□□□ -1.62
BRCA1-216ENST00000484087 TRAV4A0A0B4J268 109 aa4.94□□□□□ -1.62
BRCA1-216ENST00000484087 hDV102S1A0JD36 115 aa4.94□□□□□ -1.62
BRCA1-216ENST00000484087 SMIM9A6NGZ8 99 aa4.94□□□□□ -1.62
BRCA1-216ENST00000484087 DPM2O94777 84 aa4.94□□□□□ -1.62
BRCA1-216ENST00000484087 IGKCP01834 107 aa4.94□□□□□ -1.62
BRCA1-216ENST00000484087 PLNP26678 52 aa4.94□□□□□ -1.62
BRCA1-216ENST00000484087 HNRNPA3P51991 378 aaKnown RBP4.94□□□□□ -1.62
BRCA1-216ENST00000484087 NANOS2P60321 138 aaKnown RBP4.94□□□□□ -1.62
BRCA1-216ENST00000484087 LBHQ53QV2 105 aaPredicted RBP4.94□□□□□ -1.62
BRCA1-216ENST00000484087 NEGR1Q7Z3B1 354 aa4.94□□□□□ -1.62
BRCA1-216ENST00000484087 MRPL52Q86TS9 123 aaKnown RBP4.94□□□□□ -1.62
BRCA1-216ENST00000484087 KIR2DL5BQ8NHK3 375 aa4.94□□□□□ -1.62
BRCA1-216ENST00000484087 TMEM141Q96I45 108 aa4.94□□□□□ -1.62
BRCA1-216ENST00000484087 NOP10Q9NPE3 64 aaKnown RBP4.94□□□□□ -1.62
BRCA1-216ENST00000484087 TP53TG1Q9Y2A0 90 aa4.94□□□□□ -1.62
BRCA1-216ENST00000484087 TRGV2A0A075B6R0 118 aa4.93□□□□□ -1.62
BRCA1-216ENST00000484087 TRBV10-1A0A0K0K1A3 114 aa4.93□□□□□ -1.62
BRCA1-216ENST00000484087 M0R143 59 aa4.93□□□□□ -1.62
BRCA1-216ENST00000484087 MAJINQ3KP22 176 aa4.93□□□□□ -1.62
BRCA1-216ENST00000484087 PAPPA-AS1Q5QFB9 102 aa4.93□□□□□ -1.62
BRCA1-216ENST00000484087 UFSP1Q6NVU6 142 aa4.93□□□□□ -1.62
BRCA1-216ENST00000484087 SLC25A34Q6PIV7 304 aa4.93□□□□□ -1.62
BRCA1-216ENST00000484087 CSNK1G2-AS1Q8NCQ2 148 aa4.93□□□□□ -1.62
BRCA1-216ENST00000484087 C14orf144Q96I85 54 aa4.93□□□□□ -1.62
BRCA1-216ENST00000484087 TIMM17AQ99595 171 aa4.93□□□□□ -1.62
BRCA1-216ENST00000484087 CELA1Q9UNI1 258 aa4.93□□□□□ -1.62
BRCA1-216ENST00000484087 KMT2AQ03164 3969 aa4.93□□□□□ -1.62
BRCA1-216ENST00000484087 IGHV4-28A0A0C4DH34 117 aa4.92□□□□□ -1.62
BRCA1-216ENST00000484087 F8VRH5 84 aa4.92□□□□□ -1.62
BRCA1-216ENST00000484087 RPL36AP83881 106 aaKnown RBP4.92□□□□□ -1.62
BRCA1-216ENST00000484087 Q6ZTI0 123 aa4.92□□□□□ -1.62
BRCA1-216ENST00000484087 Q8NAQ8 132 aa4.92□□□□□ -1.62
BRCA1-216ENST00000484087 RPL36ALQ969Q0 106 aaKnown RBP4.92□□□□□ -1.62
BRCA1-216ENST00000484087 DKK2Q9UBU2 259 aa4.92□□□□□ -1.62
BRCA1-216ENST00000484087 CHTOPQ9Y3Y2 248 aaKnown RBP4.92□□□□□ -1.62
BRCA1-216ENST00000484087 FRAS1Q86XX4 4008 aa4.92□□□□□ -1.62
BRCA1-216ENST00000484087 TRGV4A0A0C4DH28 118 aa4.91□□□□□ -1.62
BRCA1-216ENST00000484087 LCE6AA0A183 80 aa4.91□□□□□ -1.62
BRCA1-216ENST00000484087 GAGE12BA1L429 117 aa4.91□□□□□ -1.62
BRCA1-216ENST00000484087 K7EQD1 137 aa4.91□□□□□ -1.62
BRCA1-216ENST00000484087 GAGE7O76087 117 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms