RNA–Protein interactions for RNA: ENST00000481673.5

CHKB-209, Transcript of choline kinase beta, humanhuman

TSL 1 (best)

Gene CHKB, Length 1,856 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-209ENST00000481673 SPANXA1Q9NS26 97 aa14.24□□□□□ -0.13
CHKB-209ENST00000481673 FLNBO75369 2602 aaKnown RBP14.24□□□□□ -0.13
CHKB-209ENST00000481673 E9PLD3 99 aa14.23□□□□□ -0.13
CHKB-209ENST00000481673 K7EQD1 137 aa14.23□□□□□ -0.13
CHKB-209ENST00000481673 HERVK_113P61574 105 aa14.23□□□□□ -0.13
CHKB-209ENST00000481673 OR11H2Q8NH07 326 aa14.23□□□□□ -0.13
CHKB-209ENST00000481673 VCX2Q9H322 139 aa14.23□□□□□ -0.13
CHKB-209ENST00000481673 TP73-AS1Q9UF72 201 aa14.23□□□□□ -0.13
CHKB-209ENST00000481673 TRGV2A0A075B6R0 118 aa14.23□□□□□ -0.13
CHKB-209ENST00000481673 SEC11AP67812 179 aa14.23□□□□□ -0.13
CHKB-209ENST00000481673 HSD52Q0P140 79 aa14.23□□□□□ -0.13
CHKB-209ENST00000481673 DAZ4Q86SG3 579 aaKnown RBP14.23□□□□□ -0.13
CHKB-209ENST00000481673 DEFB104AQ8WTQ1 72 aa14.23□□□□□ -0.13
CHKB-209ENST00000481673 DAZ3Q9NR90 486 aaKnown RBP14.23□□□□□ -0.13
CHKB-209ENST00000481673 IGLV4-69A0A075B6H9 119 aa14.21□□□□□ -0.13
CHKB-209ENST00000481673 TRBV6-4A0A1B0GX49 114 aa14.21□□□□□ -0.13
CHKB-209ENST00000481673 TCTAP57738 103 aa14.21□□□□□ -0.13
CHKB-209ENST00000481673 NFE4Q86UQ8 179 aa14.21□□□□□ -0.13
CHKB-209ENST00000481673 IGLV4-3A0A075B6K6 122 aa14.21□□□□□ -0.14
CHKB-209ENST00000481673 C11orf86A6NJI1 115 aa14.21□□□□□ -0.14
CHKB-209ENST00000481673 CHCHD7Q9BUK0 85 aa14.21□□□□□ -0.14
CHKB-209ENST00000481673 APOC4P55056 127 aa14.2□□□□□ -0.14
CHKB-209ENST00000481673 SMAGPQ0VAQ4 97 aa14.2□□□□□ -0.14
CHKB-209ENST00000481673 ZNRF2Q8NHG8 242 aa14.2□□□□□ -0.14
CHKB-209ENST00000481673 NACAE9PAV3 2078 aa14.19□□□□□ -0.14
CHKB-209ENST00000481673 GAGE12BA1L429 117 aa14.19□□□□□ -0.14
CHKB-209ENST00000481673 GAGE7O76087 117 aa14.19□□□□□ -0.14
CHKB-209ENST00000481673 GAGE12FP0CL80 117 aa14.19□□□□□ -0.14
CHKB-209ENST00000481673 GAGE12GP0CL81 117 aa14.19□□□□□ -0.14
CHKB-209ENST00000481673 GAGE12IP0CL82 117 aa14.19□□□□□ -0.14
CHKB-209ENST00000481673 TIMM21Q9BVV7 248 aa14.19□□□□□ -0.14
CHKB-209ENST00000481673 Q9UF83 564 aa14.19□□□□□ -0.14
CHKB-209ENST00000481673 TRAV8-6A0A0B4J262 113 aa14.18□□□□□ -0.14
CHKB-209ENST00000481673 SLC25A29Q8N8R3 303 aa14.18□□□□□ -0.14
CHKB-209ENST00000481673 AMELXQ99217 191 aa14.18□□□□□ -0.14
CHKB-209ENST00000481673 TRBV25-1A0A075B6N4 114 aa14.18□□□□□ -0.14
CHKB-209ENST00000481673 F8P00451 2351 aa14.18□□□□□ -0.14
CHKB-209ENST00000481673 TEP1Q99973 2627 aaKnown RBP14.17□□□□□ -0.14
CHKB-209ENST00000481673 UBE2D3P61077 147 aa14.16□□□□□ -0.14
CHKB-209ENST00000481673 UBE2D2P62837 147 aa14.16□□□□□ -0.14
CHKB-209ENST00000481673 ORAOV1Q8WV07 137 aa14.16□□□□□ -0.14
CHKB-209ENST00000481673 UBE2D4Q9Y2X8 147 aa14.16□□□□□ -0.14
CHKB-209ENST00000481673 MYMXA0A1B0GTQ4 84 aa14.16□□□□□ -0.14
CHKB-209ENST00000481673 A6NDN8 102 aa14.16□□□□□ -0.14
CHKB-209ENST00000481673 TAL2Q16559 108 aa14.16□□□□□ -0.14
CHKB-209ENST00000481673 SPATA3Q8NHX4 192 aa14.16□□□□□ -0.14
CHKB-209ENST00000481673 PHLDA1Q8WV24 401 aaPredicted RBP14.16□□□□□ -0.14
CHKB-209ENST00000481673 PRADC1Q9BSG0 188 aa14.16□□□□□ -0.14
CHKB-209ENST00000481673 ATRQ13535 2644 aa14.15□□□□□ -0.14
CHKB-209ENST00000481673 TRGV4A0A0C4DH28 118 aa14.15□□□□□ -0.14
CHKB-209ENST00000481673 MRPS36P82909 103 aaKnown RBP14.15□□□□□ -0.14
CHKB-209ENST00000481673 LINC00612Q8N6U2 182 aa14.15□□□□□ -0.14
CHKB-209ENST00000481673 GTSF1LQ9H1H1 148 aa14.15□□□□□ -0.14
CHKB-209ENST00000481673 TMEM170BQ5T4T1 132 aa14.14□□□□□ -0.15
CHKB-209ENST00000481673 OPRPNQ99935 248 aaPredicted RBP14.14□□□□□ -0.15
CHKB-209ENST00000481673 CHAC1Q9BUX1 264 aa14.14□□□□□ -0.15
CHKB-209ENST00000481673 TENM1Q9UKZ4 2725 aa14.14□□□□□ -0.15
CHKB-209ENST00000481673 CSDC2Q9Y534 153 aaKnown RBP14.14□□□□□ -0.15
CHKB-209ENST00000481673 NOTCH3Q9UM47 2321 aa14.13□□□□□ -0.15
CHKB-209ENST00000481673 IGHV3-38A0A0C4DH36 116 aa14.13□□□□□ -0.15
CHKB-209ENST00000481673 X6R8D5 127 aa14.13□□□□□ -0.15
CHKB-209ENST00000481673 GAGE1Q13065 139 aa14.12□□□□□ -0.15
CHKB-209ENST00000481673 MAPKAPK5-AS1Q8N8E1 139 aa14.12□□□□□ -0.15
CHKB-209ENST00000481673 TTTY13Q9BZ97 58 aa14.12□□□□□ -0.15
CHKB-209ENST00000481673 COX11Q9Y6N1 276 aa14.12□□□□□ -0.15
CHKB-209ENST00000481673 VWFP04275 2813 aa14.12□□□□□ -0.15
CHKB-209ENST00000481673 LYRM9A8MSI8 78 aa14.12□□□□□ -0.15
CHKB-209ENST00000481673 DGAT2L7PQ6IED9 249 aa14.12□□□□□ -0.15
CHKB-209ENST00000481673 ZNF25P17030 456 aaPredicted RBP14.11□□□□□ -0.15
CHKB-209ENST00000481673 EMP1P54849 157 aa14.11□□□□□ -0.15
CHKB-209ENST00000481673 ZMAT5Q9UDW3 170 aaKnown RBP14.11□□□□□ -0.15
CHKB-209ENST00000481673 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.1□□□□□ -0.15
CHKB-209ENST00000481673 IGKV2-29A2NJV5 120 aaPredicted RBP14.1□□□□□ -0.15
CHKB-209ENST00000481673 GAGE12JA6NER3 117 aa14.1□□□□□ -0.15
CHKB-209ENST00000481673 H7C423 109 aa14.1□□□□□ -0.15
CHKB-209ENST00000481673 GAGE4Q13068 117 aa14.1□□□□□ -0.15
CHKB-209ENST00000481673 GAGE5Q13069 117 aa14.1□□□□□ -0.15
CHKB-209ENST00000481673 FHL2Q14192 279 aa14.1□□□□□ -0.15
CHKB-209ENST00000481673 GAGE13Q4V321 117 aa14.1□□□□□ -0.15
CHKB-209ENST00000481673 FAM104AQ969W3 186 aa14.1□□□□□ -0.15
CHKB-209ENST00000481673 TINCRA0A1B0GVN0 87 aa14.09□□□□□ -0.15
CHKB-209ENST00000481673 KRTAP24-1Q3LI83 254 aa14.09□□□□□ -0.15
CHKB-209ENST00000481673 SHISA2Q6UWI4 295 aa14.09□□□□□ -0.15
CHKB-209ENST00000481673 TM2D2Q9BX73 214 aa14.09□□□□□ -0.15
CHKB-209ENST00000481673 TMEM223A0PJW6 202 aa14.08□□□□□ -0.16
CHKB-209ENST00000481673 ZNF815PA8K554 130 aa14.08□□□□□ -0.16
CHKB-209ENST00000481673 A0A0J9YXV3 536 aa14.08□□□□□ -0.16
CHKB-209ENST00000481673 TAX1BP3O14907 124 aa14.08□□□□□ -0.16
CHKB-209ENST00000481673 ZNF22P17026 224 aaPredicted RBP14.08□□□□□ -0.16
CHKB-209ENST00000481673 LEPROTO15243 131 aa14.07□□□□□ -0.16
CHKB-209ENST00000481673 CEMP1Q6PRD7 247 aaPredicted RBP14.07□□□□□ -0.16
CHKB-209ENST00000481673 CEND1Q8N111 149 aa14.07□□□□□ -0.16
CHKB-209ENST00000481673 C3orf56Q8N813 242 aa14.07□□□□□ -0.16
CHKB-209ENST00000481673 PLEKHB2Q96CS7 222 aa14.07□□□□□ -0.16
CHKB-209ENST00000481673 H3BRM9 83 aa14.06□□□□□ -0.16
CHKB-209ENST00000481673 DEFB130BP0DP73 79 aa14.06□□□□□ -0.16
CHKB-209ENST00000481673 DEFB130AP0DP74 79 aa14.06□□□□□ -0.16
CHKB-209ENST00000481673 MIFP14174 115 aa14.06□□□□□ -0.16
CHKB-209ENST00000481673 J3QQQ9 107 aa14.06□□□□□ -0.16
CHKB-209ENST00000481673 SCGB1D4Q6XE38 83 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms