RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 OVOL2Q9BRP0 275 aa10.13□□□□□ -0.79
HDAC1-206ENST00000476391 DEFB1P60022 68 aa10.12□□□□□ -0.79
HDAC1-206ENST00000476391 LINC00846Q9NV44 126 aa10.12□□□□□ -0.79
HDAC1-206ENST00000476391 UBE2D4Q9Y2X8 147 aa10.12□□□□□ -0.79
HDAC1-206ENST00000476391 TRAV12-2A0A075B6T6 113 aa10.12□□□□□ -0.79
HDAC1-206ENST00000476391 RS1O15537 224 aa10.11□□□□□ -0.79
HDAC1-206ENST00000476391 C1orf43Q9BWL3 253 aa10.11□□□□□ -0.79
HDAC1-206ENST00000476391 SERP1Q9Y6X1 66 aa10.11□□□□□ -0.79
HDAC1-206ENST00000476391 TPRP12270 2363 aaKnown RBP10.11□□□□□ -0.79
HDAC1-206ENST00000476391 F6UB75 175 aa10.11□□□□□ -0.79
HDAC1-206ENST00000476391 ATP6V0E1O15342 81 aa10.11□□□□□ -0.79
HDAC1-206ENST00000476391 MINOS1Q5TGZ0 78 aa10.11□□□□□ -0.79
HDAC1-206ENST00000476391 OBSCN-AS1Q96MR7 158 aa10.11□□□□□ -0.79
HDAC1-206ENST00000476391 FAM236DA0A1B0GTK5 79 aa10.1□□□□□ -0.79
HDAC1-206ENST00000476391 FAM236CP0DP71 79 aa10.1□□□□□ -0.79
HDAC1-206ENST00000476391 HIST2H2BCQ6DN03 193 aa10.1□□□□□ -0.79
HDAC1-206ENST00000476391 HIST2H2BDQ6DRA6 164 aa10.1□□□□□ -0.79
HDAC1-206ENST00000476391 FAM223BA6NKX1 122 aa10.09□□□□□ -0.79
HDAC1-206ENST00000476391 SPENQ96T58 3664 aaKnown RBP10.09□□□□□ -0.79
HDAC1-206ENST00000476391 CEP250Q9BV73 2442 aa10.09□□□□□ -0.79
HDAC1-206ENST00000476391 DMXL2Q8TDJ6 3036 aa10.09□□□□□ -0.79
HDAC1-206ENST00000476391 IGHV3-16A0A0C4DH30 117 aa10.09□□□□□ -0.79
HDAC1-206ENST00000476391 IGHG2P01859 326 aa10.09□□□□□ -0.79
HDAC1-206ENST00000476391 PF4P02776 101 aa10.09□□□□□ -0.79
HDAC1-206ENST00000476391 TMEM243Q9BU79 118 aa10.09□□□□□ -0.79
HDAC1-206ENST00000476391 IGLV5-45A0A087WSX0 123 aa10.08□□□□□ -0.8
HDAC1-206ENST00000476391 E7EQL1 145 aa10.08□□□□□ -0.8
HDAC1-206ENST00000476391 RPL28P46779 137 aaKnown RBP10.08□□□□□ -0.8
HDAC1-206ENST00000476391 PRORYQ9H606 182 aa10.08□□□□□ -0.8
HDAC1-206ENST00000476391 Q9HAA7 133 aa10.08□□□□□ -0.8
HDAC1-206ENST00000476391 LYNX1G3V0Z9 82 aa10.08□□□□□ -0.8
HDAC1-206ENST00000476391 LYNX1P0DP58 116 aa10.08□□□□□ -0.8
HDAC1-206ENST00000476391 SOSTDC1Q6X4U4 206 aa10.08□□□□□ -0.8
HDAC1-206ENST00000476391 C14orf132Q9NPU4 83 aa10.08□□□□□ -0.8
HDAC1-206ENST00000476391 MINOS1-NBL1R4GNA1 71 aa10.08□□□□□ -0.8
HDAC1-206ENST00000476391 GHRHP01286 108 aa10.07□□□□□ -0.8
HDAC1-206ENST00000476391 RNASE13Q5GAN3 156 aaKnown RBP10.07□□□□□ -0.8
HDAC1-206ENST00000476391 Q9H8V8 135 aa10.07□□□□□ -0.8
HDAC1-206ENST00000476391 RBMY1BA6NDE4 496 aaKnown RBP10.06□□□□□ -0.8
HDAC1-206ENST00000476391 RBMY1EA6NEQ0 496 aaKnown RBP10.06□□□□□ -0.8
HDAC1-206ENST00000476391 RBMY1DP0C7P1 496 aaKnown RBP10.06□□□□□ -0.8
HDAC1-206ENST00000476391 RBMY1A1P0DJD3 496 aaKnown RBP10.06□□□□□ -0.8
HDAC1-206ENST00000476391 RBMY1CP0DJD4 496 aa10.06□□□□□ -0.8
HDAC1-206ENST00000476391 RBMY1FQ15415 496 aaKnown RBP10.06□□□□□ -0.8
HDAC1-206ENST00000476391 FAM223AQ8IWN6 122 aa10.06□□□□□ -0.8
HDAC1-206ENST00000476391 CDKN2A-AS1Q9UH64 79 aa10.06□□□□□ -0.8
HDAC1-206ENST00000476391 G3V318 75 aa10.06□□□□□ -0.8
HDAC1-206ENST00000476391 S100A7L2Q5SY68 101 aa10.06□□□□□ -0.8
HDAC1-206ENST00000476391 ATP5EP2Q5VTU8 51 aa10.06□□□□□ -0.8
HDAC1-206ENST00000476391 PIMREGQ9BSJ6 248 aa10.06□□□□□ -0.8
HDAC1-206ENST00000476391 RPL35AP18077 110 aaKnown RBP10.05□□□□□ -0.8
HDAC1-206ENST00000476391 TMEM86BQ8N661 226 aa10.05□□□□□ -0.8
HDAC1-206ENST00000476391 TRAV13-2A0A0B4J235 113 aa10.05□□□□□ -0.8
HDAC1-206ENST00000476391 IGLV5-39A0A0G2JS06 123 aa10.05□□□□□ -0.8
HDAC1-206ENST00000476391 NDUFA4O00483 81 aa10.05□□□□□ -0.8
HDAC1-206ENST00000476391 CSMD1Q96PZ7 3565 aa10.05□□□□□ -0.8
HDAC1-206ENST00000476391 MGAQ8IWI9 3026 aa10.04□□□□□ -0.8
HDAC1-206ENST00000476391 TRBV12-3P01733 135 aa10.04□□□□□ -0.8
HDAC1-206ENST00000476391 UNQ9165/PRO28630Q6UXU0 137 aa10.04□□□□□ -0.8
HDAC1-206ENST00000476391 XCL1P47992 114 aa10.03□□□□□ -0.8
HDAC1-206ENST00000476391 C9orf129Q5T035 196 aaKnown RBP10.03□□□□□ -0.8
HDAC1-206ENST00000476391 XCL2Q9UBD3 114 aa10.03□□□□□ -0.8
HDAC1-206ENST00000476391 CUL9Q8IWT3 2517 aa10.03□□□□□ -0.8
HDAC1-206ENST00000476391 LOC400499M0QZD8 3231 aa10.02□□□□□ -0.8
HDAC1-206ENST00000476391 SMIM26A0A096LP01 95 aa10.02□□□□□ -0.81
HDAC1-206ENST00000476391 HOXD3P31249 432 aaPredicted RBP10.02□□□□□ -0.81
HDAC1-206ENST00000476391 C20orf197Q8N268 126 aa10.02□□□□□ -0.81
HDAC1-206ENST00000476391 A0A0U1RRA0 63 aa10.02□□□□□ -0.81
HDAC1-206ENST00000476391 CHCHD7Q9BUK0 85 aa10.02□□□□□ -0.81
HDAC1-206ENST00000476391 C16orf95Q9H693 158 aa10.02□□□□□ -0.81
HDAC1-206ENST00000476391 RP1L1Q8IWN7 2480 aaPredicted RBP10.01□□□□□ -0.81
HDAC1-206ENST00000476391 H0YGX0 51 aa10.01□□□□□ -0.81
HDAC1-206ENST00000476391 BDP1A6H8Y1 2624 aa10.01□□□□□ -0.81
HDAC1-206ENST00000476391 H7BZZ5 65 aa10.01□□□□□ -0.81
HDAC1-206ENST00000476391 ZNF625Q96I27 306 aaPredicted RBP10.01□□□□□ -0.81
HDAC1-206ENST00000476391 PKIGQ9Y2B9 76 aa10.01□□□□□ -0.81
HDAC1-206ENST00000476391 TECTAO75443 2155 aa10□□□□□ -0.81
HDAC1-206ENST00000476391 TRBV10-3A0A0K0K1G6 114 aa10□□□□□ -0.81
HDAC1-206ENST00000476391 BCE1O60756 84 aa10□□□□□ -0.81
HDAC1-206ENST00000476391 CRPP02741 224 aa10□□□□□ -0.81
HDAC1-206ENST00000476391 TACC2O95359 2948 aa10□□□□□ -0.81
HDAC1-206ENST00000476391 IGHV1OR15-1A0A075B7D0 117 aa9.99□□□□□ -0.81
HDAC1-206ENST00000476391 LPAL2Q16609 132 aa9.99□□□□□ -0.81
HDAC1-206ENST00000476391 A0A087WYN8 130 aa9.99□□□□□ -0.81
HDAC1-206ENST00000476391 KNCNA6PVL3 124 aa9.99□□□□□ -0.81
HDAC1-206ENST00000476391 HILS1P60008 231 aa9.99□□□□□ -0.81
HDAC1-206ENST00000476391 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.99□□□□□ -0.81
HDAC1-206ENST00000476391 IGKV3-7A0A075B6H7 116 aa9.98□□□□□ -0.81
HDAC1-206ENST00000476391 TRAV23DV6A0A075B6W5 121 aa9.98□□□□□ -0.81
HDAC1-206ENST00000476391 CCKP06307 115 aa9.98□□□□□ -0.81
HDAC1-206ENST00000476391 SEC61GP60059 68 aa9.98□□□□□ -0.81
HDAC1-206ENST00000476391 LYPD5Q6UWN5 251 aa9.98□□□□□ -0.81
HDAC1-206ENST00000476391 V9GYY9 64 aa9.98□□□□□ -0.81
HDAC1-206ENST00000476391 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.97□□□□□ -0.81
HDAC1-206ENST00000476391 IGKV2-29A2NJV5 120 aaPredicted RBP9.97□□□□□ -0.81
HDAC1-206ENST00000476391 FP248Q71RG6 208 aaPredicted RBP9.97□□□□□ -0.81
HDAC1-206ENST00000476391 RHPN1-AS1Q9BWJ2 59 aa9.97□□□□□ -0.81
HDAC1-206ENST00000476391 TTC28Q96AY4 2481 aa9.97□□□□□ -0.81
HDAC1-206ENST00000476391 CNOT1A5YKK6 2376 aaKnown RBP9.96□□□□□ -0.81
HDAC1-206ENST00000476391 KLKP1Q107X0 134 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms