RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 LINC00269Q8N2A0 174 aa13.49□□□□□ -0.25
SNX13-206ENST00000474067 KRTAP4-5Q9BYR2 181 aa13.49□□□□□ -0.25
SNX13-206ENST00000474067 H7C423 109 aa13.48□□□□□ -0.25
SNX13-206ENST00000474067 TMEM241Q24JQ0 296 aa13.48□□□□□ -0.25
SNX13-206ENST00000474067 GATD1Q8NB37 220 aa13.48□□□□□ -0.25
SNX13-206ENST00000474067 Q5VSD8 79 aa13.47□□□□□ -0.25
SNX13-206ENST00000474067 DNAH5Q8TE73 4624 aa13.47□□□□□ -0.25
SNX13-206ENST00000474067 HSPG2P98160 4391 aa13.47□□□□□ -0.25
SNX13-206ENST00000474067 A0A1B0GVG6 124 aa13.46□□□□□ -0.25
SNX13-206ENST00000474067 HIGD1CA8MV81 97 aa13.46□□□□□ -0.25
SNX13-206ENST00000474067 PPP1R17O96001 155 aa13.46□□□□□ -0.25
SNX13-206ENST00000474067 RIGQ13278 110 aa13.46□□□□□ -0.25
SNX13-206ENST00000474067 CLRN3Q8NCR9 226 aa13.46□□□□□ -0.25
SNX13-206ENST00000474067 APCSP02743 223 aa13.45□□□□□ -0.26
SNX13-206ENST00000474067 AMMECR1LQ6DCA0 310 aa13.45□□□□□ -0.26
SNX13-206ENST00000474067 DGAT2L7PQ6IED9 249 aa13.45□□□□□ -0.26
SNX13-206ENST00000474067 TMEM191AQ9H0A3 160 aa13.45□□□□□ -0.26
SNX13-206ENST00000474067 NAT8Q9UHE5 227 aa13.45□□□□□ -0.26
SNX13-206ENST00000474067 Q6ZSA8 131 aa13.44□□□□□ -0.26
SNX13-206ENST00000474067 MRAP2Q96G30 205 aa13.44□□□□□ -0.26
SNX13-206ENST00000474067 TRAV26-2A0A0B4J265 109 aa13.43□□□□□ -0.26
SNX13-206ENST00000474067 TRBV6-5A0A0K0K1A5 114 aa13.43□□□□□ -0.26
SNX13-206ENST00000474067 SDHAF1A6NFY7 115 aa13.43□□□□□ -0.26
SNX13-206ENST00000474067 USP17L23D6RBM5 183 aa13.43□□□□□ -0.26
SNX13-206ENST00000474067 CLPSL2Q6UWE3 100 aa13.43□□□□□ -0.26
SNX13-206ENST00000474067 NAT8BQ9UHF3 227 aa13.43□□□□□ -0.26
SNX13-206ENST00000474067 I3L3M4 83 aa13.42□□□□□ -0.26
SNX13-206ENST00000474067 PMCHP20382 165 aa13.42□□□□□ -0.26
SNX13-206ENST00000474067 C20orf203Q8NBC4 194 aa13.42□□□□□ -0.26
SNX13-206ENST00000474067 BTF3L4Q96K17 158 aa13.42□□□□□ -0.26
SNX13-206ENST00000474067 ST20Q9HBF5 79 aa13.42□□□□□ -0.26
SNX13-206ENST00000474067 PLA2G1BP04054 148 aaKnown RBP13.41□□□□□ -0.26
SNX13-206ENST00000474067 INAFM2P0DMQ5 153 aa13.41□□□□□ -0.26
SNX13-206ENST00000474067 ZNF25P17030 456 aaPredicted RBP13.41□□□□□ -0.26
SNX13-206ENST00000474067 SMAGPQ0VAQ4 97 aa13.41□□□□□ -0.26
SNX13-206ENST00000474067 ISOC2Q96AB3 205 aa13.41□□□□□ -0.26
SNX13-206ENST00000474067 APOBP04114 4563 aaKnown RBP13.4□□□□□ -0.26
SNX13-206ENST00000474067 A0A1B0GW15 77 aa13.4□□□□□ -0.26
SNX13-206ENST00000474067 ADIRFQ15847 76 aa13.4□□□□□ -0.26
SNX13-206ENST00000474067 RPL39LQ96EH5 51 aaKnown RBP13.4□□□□□ -0.26
SNX13-206ENST00000474067 TMEM101Q96IK0 257 aa13.4□□□□□ -0.26
SNX13-206ENST00000474067 AP5S1Q9NUS5 200 aa13.4□□□□□ -0.26
SNX13-206ENST00000474067 SMR3BP02814 79 aaPredicted RBP13.39□□□□□ -0.27
SNX13-206ENST00000474067 RPL23P62829 140 aaKnown RBP13.39□□□□□ -0.27
SNX13-206ENST00000474067 CFAP161Q6P656 301 aa13.39□□□□□ -0.27
SNX13-206ENST00000474067 V9GYV3 84 aa13.39□□□□□ -0.27
SNX13-206ENST00000474067 IGLV4-60A0A075B6I1 120 aa13.38□□□□□ -0.27
SNX13-206ENST00000474067 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.38□□□□□ -0.27
SNX13-206ENST00000474067 S100A8P05109 93 aa13.38□□□□□ -0.27
SNX13-206ENST00000474067 RNASEKQ6P5S7 137 aaKnown RBP13.38□□□□□ -0.27
SNX13-206ENST00000474067 IGLV10-54A0A075B6I4 117 aa13.37□□□□□ -0.27
SNX13-206ENST00000474067 FAM30AQ9NZY2 134 aa13.37□□□□□ -0.27
SNX13-206ENST00000474067 PPP1R2P9O14990 202 aa13.36□□□□□ -0.27
SNX13-206ENST00000474067 RAB14P61106 215 aa13.36□□□□□ -0.27
SNX13-206ENST00000474067 NUP35Q8NFH5 326 aa13.36□□□□□ -0.27
SNX13-206ENST00000474067 CHAC1Q9BUX1 264 aa13.36□□□□□ -0.27
SNX13-206ENST00000474067 RAB4AP20338 218 aa13.35□□□□□ -0.27
SNX13-206ENST00000474067 TCAPO15273 167 aa13.34□□□□□ -0.27
SNX13-206ENST00000474067 FGF6P10767 208 aa13.34□□□□□ -0.27
SNX13-206ENST00000474067 KRTAP26-1Q6PEX3 210 aa13.34□□□□□ -0.27
SNX13-206ENST00000474067 KIR2DL4Q99706 377 aa13.34□□□□□ -0.27
SNX13-206ENST00000474067 TRBV27A0A0K0K1C4 114 aa13.33□□□□□ -0.28
SNX13-206ENST00000474067 hDV102S1A0JD36 115 aa13.33□□□□□ -0.28
SNX13-206ENST00000474067 LINC00862A6NCI5 91 aa13.33□□□□□ -0.28
SNX13-206ENST00000474067 VCYO14598 125 aa13.33□□□□□ -0.28
SNX13-206ENST00000474067 PRSS1P07477 247 aa13.33□□□□□ -0.28
SNX13-206ENST00000474067 FCER1GP30273 86 aa13.33□□□□□ -0.28
SNX13-206ENST00000474067 HAMPP81172 84 aa13.33□□□□□ -0.28
SNX13-206ENST00000474067 AMN1Q8IY45 258 aa13.33□□□□□ -0.28
SNX13-206ENST00000474067 C9orf163Q8N9P6 203 aa13.33□□□□□ -0.28
SNX13-206ENST00000474067 OR5A1Q8NGJ0 315 aa13.33□□□□□ -0.28
SNX13-206ENST00000474067 ABCA13Q86UQ4 5058 aa13.32□□□□□ -0.28
SNX13-206ENST00000474067 SMIM27A0A1W2PRY6 76 aa13.32□□□□□ -0.28
SNX13-206ENST00000474067 F8W036 122 aa13.32□□□□□ -0.28
SNX13-206ENST00000474067 CNBPP62633 177 aaKnown RBP13.32□□□□□ -0.28
SNX13-206ENST00000474067 SCXQ7RTU7 201 aa13.32□□□□□ -0.28
SNX13-206ENST00000474067 DEFB104AQ8WTQ1 72 aa13.32□□□□□ -0.28
SNX13-206ENST00000474067 TMEM18Q96B42 140 aa13.32□□□□□ -0.28
SNX13-206ENST00000474067 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.31□□□□□ -0.28
SNX13-206ENST00000474067 IGKV2-29A2NJV5 120 aaPredicted RBP13.31□□□□□ -0.28
SNX13-206ENST00000474067 C7orf77A4D0Y5 90 aa13.31□□□□□ -0.28
SNX13-206ENST00000474067 LINC01620Q4KN68 170 aa13.31□□□□□ -0.28
SNX13-206ENST00000474067 LINC00528Q8N1L1 170 aa13.31□□□□□ -0.28
SNX13-206ENST00000474067 RNF185Q96GF1 192 aa13.31□□□□□ -0.28
SNX13-206ENST00000474067 PKIGQ9Y2B9 76 aa13.31□□□□□ -0.28
SNX13-206ENST00000474067 IGKV3OR2-268A0A0C4DH90 116 aa13.3□□□□□ -0.28
SNX13-206ENST00000474067 POLR2KP53803 58 aaKnown RBP13.3□□□□□ -0.28
SNX13-206ENST00000474067 SUMO2P61956 95 aaKnown RBP13.3□□□□□ -0.28
SNX13-206ENST00000474067 ESDP10768 282 aa13.29□□□□□ -0.28
SNX13-206ENST00000474067 TMEM242Q9NWH2 141 aa13.29□□□□□ -0.28
SNX13-206ENST00000474067 IGHV3-64A0A075B6Q5 118 aa13.28□□□□□ -0.28
SNX13-206ENST00000474067 GAGE12HA6NDE8 117 aa13.28□□□□□ -0.28
SNX13-206ENST00000474067 TSHBP01222 138 aa13.28□□□□□ -0.28
SNX13-206ENST00000474067 HBBP68871 147 aa13.28□□□□□ -0.28
SNX13-206ENST00000474067 PNRC1Q12796 327 aaPredicted RBP13.28□□□□□ -0.28
SNX13-206ENST00000474067 FAM104BQ5XKR9 115 aa13.28□□□□□ -0.28
SNX13-206ENST00000474067 MRPL52Q86TS9 123 aaKnown RBP13.28□□□□□ -0.28
SNX13-206ENST00000474067 C20orf78Q9BR46 151 aa13.28□□□□□ -0.28
SNX13-206ENST00000474067 C9JQL5 133 aa13.27□□□□□ -0.29
SNX13-206ENST00000474067 CCL25O15444 150 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms