RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 NHP2Q9NX24 153 aaKnown RBP3.96□□□□□ -1.78
RTF1-203ENST00000473214 TRPM6Q9BX84 2022 aa3.95□□□□□ -1.78
RTF1-203ENST00000473214 IGKV1OR2-108A0A075B7D4 117 aa3.95□□□□□ -1.78
RTF1-203ENST00000473214 IGHV3-15A0A0B4J1V0 119 aa3.95□□□□□ -1.78
RTF1-203ENST00000473214 TRAV1-1A0A0B4J248 108 aa3.95□□□□□ -1.78
RTF1-203ENST00000473214 LOC107984156A0A0G2JMH3 177 aa3.95□□□□□ -1.78
RTF1-203ENST00000473214 UBE2L5PA0A1B0GUS4 154 aa3.95□□□□□ -1.78
RTF1-203ENST00000473214 ZNF705FA8MVS1 300 aaPredicted RBP3.95□□□□□ -1.78
RTF1-203ENST00000473214 UBE2L3P68036 154 aaKnown RBP3.95□□□□□ -1.78
RTF1-203ENST00000473214 RPL36AP83881 106 aaKnown RBP3.95□□□□□ -1.78
RTF1-203ENST00000473214 ASB16-AS1Q495Z4 193 aa3.95□□□□□ -1.78
RTF1-203ENST00000473214 ARL17AQ8IVW1 177 aa3.95□□□□□ -1.78
RTF1-203ENST00000473214 PATE1Q8WXA2 126 aa3.95□□□□□ -1.78
RTF1-203ENST00000473214 POP5Q969H6 163 aaKnown RBP3.95□□□□□ -1.78
RTF1-203ENST00000473214 TIMM9Q9Y5J7 89 aa3.95□□□□□ -1.78
RTF1-203ENST00000473214 RTTNQ86VV8 2226 aa3.95□□□□□ -1.78
RTF1-203ENST00000473214 PRRC2AP48634 2157 aaKnown RBP3.95□□□□□ -1.78
RTF1-203ENST00000473214 STAB1Q9NY15 2570 aa3.94□□□□□ -1.78
RTF1-203ENST00000473214 ANKRD36A6QL64 1941 aa3.94□□□□□ -1.78
RTF1-203ENST00000473214 A8MUU9 505 aa3.94□□□□□ -1.78
RTF1-203ENST00000473214 GNRH2O43555 120 aa3.94□□□□□ -1.78
RTF1-203ENST00000473214 PIPP12273 146 aaPredicted RBP3.94□□□□□ -1.78
RTF1-203ENST00000473214 CD24P25063 80 aa3.94□□□□□ -1.78
RTF1-203ENST00000473214 ATP5EP56381 51 aaPredicted RBP3.94□□□□□ -1.78
RTF1-203ENST00000473214 ADIRFQ15847 76 aa3.94□□□□□ -1.78
RTF1-203ENST00000473214 HIGD2BQ4VC39 106 aa3.94□□□□□ -1.78
RTF1-203ENST00000473214 C5orf38Q86SI9 138 aa3.94□□□□□ -1.78
RTF1-203ENST00000473214 DYNAPQ8N1N2 210 aa3.94□□□□□ -1.78
RTF1-203ENST00000473214 Q8NDZ9 215 aa3.94□□□□□ -1.78
RTF1-203ENST00000473214 MUC7Q8TAX7 377 aa3.94□□□□□ -1.78
RTF1-203ENST00000473214 LY96Q9Y6Y9 160 aa3.94□□□□□ -1.78
RTF1-203ENST00000473214 CSPG4Q6UVK1 2322 aa3.94□□□□□ -1.78
RTF1-203ENST00000473214 IGKV1D-37A0A075B6S9 117 aa3.93□□□□□ -1.78
RTF1-203ENST00000473214 PIRTP0C851 137 aa3.93□□□□□ -1.78
RTF1-203ENST00000473214 DEFA4P12838 97 aa3.93□□□□□ -1.78
RTF1-203ENST00000473214 FAUP35544 74 aaKnown RBP3.93□□□□□ -1.78
RTF1-203ENST00000473214 MPV17P39210 176 aa3.93□□□□□ -1.78
RTF1-203ENST00000473214 INSL4Q14641 139 aa3.93□□□□□ -1.78
RTF1-203ENST00000473214 GFI1BQ5VTD9 330 aa3.93□□□□□ -1.78
RTF1-203ENST00000473214 Q8N8P6 123 aa3.93□□□□□ -1.78
RTF1-203ENST00000473214 HCFC1P51610 2035 aa3.93□□□□□ -1.78
RTF1-203ENST00000473214 ATRQ13535 2644 aa3.92□□□□□ -1.78
RTF1-203ENST00000473214 JMJD1CQ15652 2540 aa3.92□□□□□ -1.78
RTF1-203ENST00000473214 TRAV7A0A075B6U4 112 aa3.92□□□□□ -1.78
RTF1-203ENST00000473214 TRAV3A0A0B4J244 114 aa3.92□□□□□ -1.78
RTF1-203ENST00000473214 hDV103S1A0JD37 113 aa3.92□□□□□ -1.78
RTF1-203ENST00000473214 C17orf98A8MV24 154 aa3.92□□□□□ -1.78
RTF1-203ENST00000473214 M0R233 179 aa3.92□□□□□ -1.78
RTF1-203ENST00000473214 CGAP01215 116 aa3.92□□□□□ -1.78
RTF1-203ENST00000473214 LHBP01229 141 aa3.92□□□□□ -1.78
RTF1-203ENST00000473214 CFC1P0CG37 223 aa3.92□□□□□ -1.78
RTF1-203ENST00000473214 SSR2P43308 183 aa3.92□□□□□ -1.78
RTF1-203ENST00000473214 RPS10P46783 165 aaKnown RBP3.92□□□□□ -1.78
RTF1-203ENST00000473214 HINT1P49773 126 aaPredicted RBP3.92□□□□□ -1.78
RTF1-203ENST00000473214 ZNF117Q03924 483 aa3.92□□□□□ -1.78
RTF1-203ENST00000473214 ESRGQ1W209 222 aa3.92□□□□□ -1.78
RTF1-203ENST00000473214 Q8IYB0 196 aa3.92□□□□□ -1.78
RTF1-203ENST00000473214 TYMSOSQ8TAI1 123 aa3.92□□□□□ -1.78
RTF1-203ENST00000473214 C20orf78Q9BR46 151 aa3.92□□□□□ -1.78
RTF1-203ENST00000473214 SLC50A1Q9BRV3 221 aa3.92□□□□□ -1.78
RTF1-203ENST00000473214 COL6A5A8TX70 2615 aa3.91□□□□□ -1.78
RTF1-203ENST00000473214 MDC1Q14676 2089 aaKnown RBP3.91□□□□□ -1.78
RTF1-203ENST00000473214 NSD1Q96L73 2696 aaPredicted RBP3.91□□□□□ -1.78
RTF1-203ENST00000473214 IGKV2D-26A0A0A0MRZ7 120 aa3.91□□□□□ -1.78
RTF1-203ENST00000473214 E7EQL1 145 aa3.91□□□□□ -1.78
RTF1-203ENST00000473214 C17orf112F2Z3M2 114 aa3.91□□□□□ -1.78
RTF1-203ENST00000473214 CPSF4O95639 269 aaKnown RBP3.91□□□□□ -1.78
RTF1-203ENST00000473214 IGKCP01834 107 aa3.91□□□□□ -1.78
RTF1-203ENST00000473214 CBLN1P23435 193 aa3.91□□□□□ -1.78
RTF1-203ENST00000473214 FXYD2P54710 66 aa3.91□□□□□ -1.78
RTF1-203ENST00000473214 RBM3P98179 157 aaKnown RBP3.91□□□□□ -1.78
RTF1-203ENST00000473214 LYZL1Q6UWQ5 148 aa3.91□□□□□ -1.78
RTF1-203ENST00000473214 Q6ZQT7 251 aa3.91□□□□□ -1.78
RTF1-203ENST00000473214 Q8N814 137 aa3.91□□□□□ -1.78
RTF1-203ENST00000473214 C15orf53Q8NAA6 179 aa3.91□□□□□ -1.78
RTF1-203ENST00000473214 FDCSPQ8NFU4 85 aa3.91□□□□□ -1.78
RTF1-203ENST00000473214 FAM213BQ8TBF2 198 aa3.91□□□□□ -1.78
RTF1-203ENST00000473214 Q96M85 177 aa3.91□□□□□ -1.78
RTF1-203ENST00000473214 SMIM7Q9BQ49 75 aa3.91□□□□□ -1.78
RTF1-203ENST00000473214 ST20Q9HBF5 79 aa3.91□□□□□ -1.78
RTF1-203ENST00000473214 FLNAP21333 2647 aaKnown RBP3.9□□□□□ -1.79
RTF1-203ENST00000473214 PIGBOS1A0A0B4J2F0 54 aa3.9□□□□□ -1.79
RTF1-203ENST00000473214 TRBV10-2A0A0K0K1G8 114 aa3.9□□□□□ -1.79
RTF1-203ENST00000473214 H3BPC8 53 aa3.9□□□□□ -1.79
RTF1-203ENST00000473214 IGLV1-51P01701 117 aa3.9□□□□□ -1.79
RTF1-203ENST00000473214 DNAH10OSP0CZ25 163 aa3.9□□□□□ -1.79
RTF1-203ENST00000473214 COX6B1P14854 86 aa3.9□□□□□ -1.79
RTF1-203ENST00000473214 GNGT1P63211 74 aa3.9□□□□□ -1.79
RTF1-203ENST00000473214 LGALSLQ3ZCW2 172 aaPredicted RBP3.9□□□□□ -1.79
RTF1-203ENST00000473214 S100A7L2Q5SY68 101 aa3.9□□□□□ -1.79
RTF1-203ENST00000473214 FAM27BQ5VT28 67 aa3.9□□□□□ -1.79
RTF1-203ENST00000473214 IMMP1LQ96LU5 166 aa3.9□□□□□ -1.79
RTF1-203ENST00000473214 RABAC1Q9UI14 185 aa3.9□□□□□ -1.79
RTF1-203ENST00000473214 MYO7BQ6PIF6 2116 aa3.89□□□□□ -1.79
RTF1-203ENST00000473214 ZGRF1Q86YA3 2104 aa3.89□□□□□ -1.79
RTF1-203ENST00000473214 TANC2Q9HCD6 1990 aa3.89□□□□□ -1.79
RTF1-203ENST00000473214 CHD3Q12873 2000 aaKnown RBP3.89□□□□□ -1.79
RTF1-203ENST00000473214 MAP1AP78559 2803 aaPredicted RBP3.89□□□□□ -1.79
RTF1-203ENST00000473214 TRAV14DV4A0A0A6YYC5 116 aa3.89□□□□□ -1.79
RTF1-203ENST00000473214 hADV29S1A0JD25 119 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms