RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 C2orf82Q6UX34 121 aa9.32□□□□□ -0.92
USP11-206ENST00000469080 PLEKHB2Q96CS7 222 aa9.32□□□□□ -0.92
USP11-206ENST00000469080 TMEM14CQ9P0S9 112 aa9.32□□□□□ -0.92
USP11-206ENST00000469080 KNCNA6PVL3 124 aa9.32□□□□□ -0.92
USP11-206ENST00000469080 LINC01356Q8N9X3 169 aa9.32□□□□□ -0.92
USP11-206ENST00000469080 TRBV7-1A0A0A6YYK4 115 aa9.31□□□□□ -0.92
USP11-206ENST00000469080 Q8N6K4 173 aa9.31□□□□□ -0.92
USP11-206ENST00000469080 LGALS9O00182 355 aa9.31□□□□□ -0.92
USP11-206ENST00000469080 JPT2Q9H910 190 aa9.31□□□□□ -0.92
USP11-206ENST00000469080 SLC25A16P16260 332 aa9.3□□□□□ -0.92
USP11-206ENST00000469080 UBE2D1P51668 147 aa9.3□□□□□ -0.92
USP11-206ENST00000469080 RPS28P62857 69 aaKnown RBP9.3□□□□□ -0.92
USP11-206ENST00000469080 TMEM170BQ5T4T1 132 aa9.3□□□□□ -0.92
USP11-206ENST00000469080 KLHL30-AS1Q8NEE0 82 aa9.3□□□□□ -0.92
USP11-206ENST00000469080 C20orf173Q96LM9 149 aa9.3□□□□□ -0.92
USP11-206ENST00000469080 MAST4O15021 2626 aa9.3□□□□□ -0.92
USP11-206ENST00000469080 ZNF22P17026 224 aaPredicted RBP9.3□□□□□ -0.92
USP11-206ENST00000469080 SLURP1P55000 103 aa9.3□□□□□ -0.92
USP11-206ENST00000469080 NBEAL1Q6ZS30 2694 aa9.3□□□□□ -0.92
USP11-206ENST00000469080 DYNLRB2Q8TF09 96 aa9.3□□□□□ -0.92
USP11-206ENST00000469080 PRO1854Q9UHT4 67 aa9.3□□□□□ -0.92
USP11-206ENST00000469080 LINC01620Q4KN68 170 aa9.29□□□□□ -0.92
USP11-206ENST00000469080 V9GYY9 64 aa9.29□□□□□ -0.92
USP11-206ENST00000469080 ZNRF2Q8NHG8 242 aa9.29□□□□□ -0.92
USP11-206ENST00000469080 RPL13AP40429 203 aaKnown RBP9.29□□□□□ -0.92
USP11-206ENST00000469080 NSUN5P1Q3KNT7 163 aa9.29□□□□□ -0.92
USP11-206ENST00000469080 DPH3Q96FX2 82 aa9.29□□□□□ -0.92
USP11-206ENST00000469080 ZFAND3Q9H8U3 227 aa9.29□□□□□ -0.92
USP11-206ENST00000469080 C11orf21Q9P2W6 132 aa9.29□□□□□ -0.92
USP11-206ENST00000469080 TENM4Q6N022 2769 aa9.28□□□□□ -0.92
USP11-206ENST00000469080 MUC4Q99102 2169 aa9.28□□□□□ -0.92
USP11-206ENST00000469080 CFC1BP0CG36 223 aa9.28□□□□□ -0.92
USP11-206ENST00000469080 CFC1P0CG37 223 aa9.28□□□□□ -0.92
USP11-206ENST00000469080 PRR9Q5T870 116 aa9.28□□□□□ -0.92
USP11-206ENST00000469080 UBE2E2Q96LR5 201 aa9.28□□□□□ -0.92
USP11-206ENST00000469080 SLC50A1Q9BRV3 221 aa9.28□□□□□ -0.92
USP11-206ENST00000469080 A0A0U1RQV1 116 aa9.27□□□□□ -0.93
USP11-206ENST00000469080 CLPSL1A2RUU4 121 aa9.27□□□□□ -0.93
USP11-206ENST00000469080 PLNP26678 52 aa9.27□□□□□ -0.93
USP11-206ENST00000469080 PDE6HQ13956 83 aa9.27□□□□□ -0.93
USP11-206ENST00000469080 ATXN8Q156A1 80 aa9.27□□□□□ -0.93
USP11-206ENST00000469080 SMR3AQ99954 134 aa9.27□□□□□ -0.93
USP11-206ENST00000469080 DAZ1Q9NQZ3 744 aaKnown RBP9.27□□□□□ -0.93
USP11-206ENST00000469080 OVOL1O14753 267 aa9.27□□□□□ -0.93
USP11-206ENST00000469080 COX7CP15954 63 aa9.27□□□□□ -0.93
USP11-206ENST00000469080 LYPD1Q8N2G4 141 aa9.27□□□□□ -0.93
USP11-206ENST00000469080 PRO0628Q9UI54 55 aa9.26□□□□□ -0.93
USP11-206ENST00000469080 EBI3Q14213 229 aa9.26□□□□□ -0.93
USP11-206ENST00000469080 IGHV4OR15-8A0A075B7B6 117 aa9.26□□□□□ -0.93
USP11-206ENST00000469080 A0A087WW49 117 aa9.26□□□□□ -0.93
USP11-206ENST00000469080 IGKV3D-20A0A0C4DH25 116 aa9.26□□□□□ -0.93
USP11-206ENST00000469080 DEFB131AP59861 70 aa9.26□□□□□ -0.93
USP11-206ENST00000469080 APRG1Q8IVJ8 170 aa9.26□□□□□ -0.93
USP11-206ENST00000469080 RS1O15537 224 aa9.25□□□□□ -0.93
USP11-206ENST00000469080 TRAV13-1A0A0B4J241 112 aa9.25□□□□□ -0.93
USP11-206ENST00000469080 MALP21145 153 aa9.25□□□□□ -0.93
USP11-206ENST00000469080 RPL39LQ96EH5 51 aaKnown RBP9.25□□□□□ -0.93
USP11-206ENST00000469080 PYGO1Q9Y3Y4 419 aa9.25□□□□□ -0.93
USP11-206ENST00000469080 TRBV7-7A0A0K0K1E9 115 aa9.25□□□□□ -0.93
USP11-206ENST00000469080 FAM236DA0A1B0GTK5 79 aa9.25□□□□□ -0.93
USP11-206ENST00000469080 H7C1H1 209 aa9.25□□□□□ -0.93
USP11-206ENST00000469080 FAM236CP0DP71 79 aa9.25□□□□□ -0.93
USP11-206ENST00000469080 U3KQK5 164 aa9.25□□□□□ -0.93
USP11-206ENST00000469080 OXTP01178 125 aa9.24□□□□□ -0.93
USP11-206ENST00000469080 LINC00336Q6ZUF6 198 aa9.24□□□□□ -0.93
USP11-206ENST00000469080 A6NDX4 124 aa9.24□□□□□ -0.93
USP11-206ENST00000469080 IGHG2P01859 326 aa9.24□□□□□ -0.93
USP11-206ENST00000469080 POM121L12Q8N7R1 296 aa9.24□□□□□ -0.93
USP11-206ENST00000469080 NOTCH1P46531 2555 aa9.24□□□□□ -0.93
USP11-206ENST00000469080 IGHV3-64A0A075B6Q5 118 aa9.24□□□□□ -0.93
USP11-206ENST00000469080 F8VRH5 84 aa9.24□□□□□ -0.93
USP11-206ENST00000469080 HOXD3P31249 432 aaPredicted RBP9.24□□□□□ -0.93
USP11-206ENST00000469080 FAM19A4Q96LR4 140 aa9.24□□□□□ -0.93
USP11-206ENST00000469080 IGHV3-16A0A0C4DH30 117 aa9.23□□□□□ -0.93
USP11-206ENST00000469080 FAM223BA6NKX1 122 aa9.23□□□□□ -0.93
USP11-206ENST00000469080 SNRPD3P62318 126 aaKnown RBP9.23□□□□□ -0.93
USP11-206ENST00000469080 Q5XG85 94 aa9.23□□□□□ -0.93
USP11-206ENST00000469080 FAM223AQ8IWN6 122 aa9.23□□□□□ -0.93
USP11-206ENST00000469080 TRBV10-2A0A0K0K1G8 114 aa9.23□□□□□ -0.93
USP11-206ENST00000469080 PFN2P35080 140 aa9.23□□□□□ -0.93
USP11-206ENST00000469080 DEFB113Q30KQ7 82 aa9.23□□□□□ -0.93
USP11-206ENST00000469080 CYSTM1Q9H1C7 97 aa9.23□□□□□ -0.93
USP11-206ENST00000469080 IGHV3-53P01767 116 aa9.22□□□□□ -0.93
USP11-206ENST00000469080 ELANEP08246 267 aa9.22□□□□□ -0.93
USP11-206ENST00000469080 MGAM2Q2M2H8 2515 aa9.22□□□□□ -0.93
USP11-206ENST00000469080 IGHV7-4-1A0A0J9YVY3 117 aa9.22□□□□□ -0.93
USP11-206ENST00000469080 LINC01619G3V211 115 aa9.22□□□□□ -0.93
USP11-206ENST00000469080 XCL2Q9UBD3 114 aa9.22□□□□□ -0.93
USP11-206ENST00000469080 C9orf139Q6ZV77 190 aa9.22□□□□□ -0.93
USP11-206ENST00000469080 TRAV21A0A0B4J279 112 aa9.21□□□□□ -0.93
USP11-206ENST00000469080 Q8N8P6 123 aa9.21□□□□□ -0.93
USP11-206ENST00000469080 NDUFA4O00483 81 aa9.21□□□□□ -0.94
USP11-206ENST00000469080 USMG5Q96IX5 58 aa9.21□□□□□ -0.94
USP11-206ENST00000469080 SCGB3A1Q96QR1 104 aa9.21□□□□□ -0.94
USP11-206ENST00000469080 LAGE3Q14657 143 aa9.2□□□□□ -0.94
USP11-206ENST00000469080 IGHV4-31P0DP07 118 aa9.2□□□□□ -0.94
USP11-206ENST00000469080 TMEM258P61165 79 aa9.2□□□□□ -0.94
USP11-206ENST00000469080 RNASE13Q5GAN3 156 aaKnown RBP9.2□□□□□ -0.94
USP11-206ENST00000469080 CFHR3Q02985 330 aa9.19□□□□□ -0.94
USP11-206ENST00000469080 LINC01559Q495D7 138 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 1156.6 ms