RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 C5orf38Q86SI9 138 aa8.62□□□□□ -1.03
TRAPPC3-205ENST00000462715 IGLV4-69A0A075B6H9 119 aa8.61□□□□□ -1.03
TRAPPC3-205ENST00000462715 LOC107984640A0A0U1RRK4 108 aa8.61□□□□□ -1.03
TRAPPC3-205ENST00000462715 ATOX1O00244 68 aa8.61□□□□□ -1.03
TRAPPC3-205ENST00000462715 KLHL30-AS1Q8NEE0 82 aa8.61□□□□□ -1.03
TRAPPC3-205ENST00000462715 LEPROTO15243 131 aa8.61□□□□□ -1.03
TRAPPC3-205ENST00000462715 TIMM17AQ99595 171 aa8.61□□□□□ -1.03
TRAPPC3-205ENST00000462715 MOB4Q9Y3A3 225 aa8.61□□□□□ -1.03
TRAPPC3-205ENST00000462715 IGHV7-4-1A0A0J9YVY3 117 aa8.6□□□□□ -1.03
TRAPPC3-205ENST00000462715 J3QQQ9 107 aa8.6□□□□□ -1.03
TRAPPC3-205ENST00000462715 K7EIM0 57 aa8.6□□□□□ -1.03
TRAPPC3-205ENST00000462715 LGALS3P17931 250 aaKnown RBP8.6□□□□□ -1.03
TRAPPC3-205ENST00000462715 Q6ZS46 218 aa8.6□□□□□ -1.03
TRAPPC3-205ENST00000462715 TPSG1Q9NRR2 321 aa8.6□□□□□ -1.03
TRAPPC3-205ENST00000462715 ZNF256Q9Y2P7 627 aaPredicted RBP8.6□□□□□ -1.03
TRAPPC3-205ENST00000462715 TRGV3P03979 118 aa8.6□□□□□ -1.03
TRAPPC3-205ENST00000462715 CRYGDP07320 174 aa8.6□□□□□ -1.03
TRAPPC3-205ENST00000462715 Q8N6K4 173 aa8.6□□□□□ -1.03
TRAPPC3-205ENST00000462715 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.6□□□□□ -1.03
TRAPPC3-205ENST00000462715 MRPL53Q96EL3 112 aaKnown RBP8.6□□□□□ -1.03
TRAPPC3-205ENST00000462715 MFAP4P55083 255 aa8.59□□□□□ -1.03
TRAPPC3-205ENST00000462715 HIST1H4AP62805 103 aaKnown RBP8.59□□□□□ -1.03
TRAPPC3-205ENST00000462715 KRTAP24-1Q3LI83 254 aa8.59□□□□□ -1.03
TRAPPC3-205ENST00000462715 IGKV3D-20A0A0C4DH25 116 aa8.59□□□□□ -1.03
TRAPPC3-205ENST00000462715 TMEM223A0PJW6 202 aa8.59□□□□□ -1.03
TRAPPC3-205ENST00000462715 LST1O00453 97 aa8.59□□□□□ -1.03
TRAPPC3-205ENST00000462715 TRACP01848 142 aa8.59□□□□□ -1.03
TRAPPC3-205ENST00000462715 MED14OSP0DP75 135 aa8.59□□□□□ -1.03
TRAPPC3-205ENST00000462715 Q1RN00 199 aa8.59□□□□□ -1.03
TRAPPC3-205ENST00000462715 EIF4EBP3O60516 100 aaPredicted RBP8.58□□□□□ -1.04
TRAPPC3-205ENST00000462715 KRTAP21-3Q3LHN1 58 aa8.58□□□□□ -1.04
TRAPPC3-205ENST00000462715 C2orf48Q96LS8 159 aa8.58□□□□□ -1.04
TRAPPC3-205ENST00000462715 IGHV3-21A0A0B4J1V1 117 aa8.58□□□□□ -1.04
TRAPPC3-205ENST00000462715 OVOL1O14753 267 aa8.58□□□□□ -1.04
TRAPPC3-205ENST00000462715 NBR2O15453 112 aa8.58□□□□□ -1.04
TRAPPC3-205ENST00000462715 TRIAP1O43715 76 aa8.58□□□□□ -1.04
TRAPPC3-205ENST00000462715 SPANXN1Q5VSR9 72 aa8.58□□□□□ -1.04
TRAPPC3-205ENST00000462715 AGPAT4-IT1Q9H0P7 198 aa8.58□□□□□ -1.04
TRAPPC3-205ENST00000462715 DPH3P1Q9H4G8 78 aa8.58□□□□□ -1.04
TRAPPC3-205ENST00000462715 FBN1P35555 2871 aaKnown RBP8.57□□□□□ -1.04
TRAPPC3-205ENST00000462715 IGIPA6NJ69 53 aa8.57□□□□□ -1.04
TRAPPC3-205ENST00000462715 F5H768 121 aa8.57□□□□□ -1.04
TRAPPC3-205ENST00000462715 C5orf56Q8N8D9 126 aa8.57□□□□□ -1.04
TRAPPC3-205ENST00000462715 PEMTQ9UBM1 199 aa8.57□□□□□ -1.04
TRAPPC3-205ENST00000462715 ICOSQ9Y6W8 199 aa8.57□□□□□ -1.04
TRAPPC3-205ENST00000462715 ELANEP08246 267 aa8.56□□□□□ -1.04
TRAPPC3-205ENST00000462715 ZNF876PQ49A33 203 aa8.56□□□□□ -1.04
TRAPPC3-205ENST00000462715 Q6ZSV7 163 aa8.56□□□□□ -1.04
TRAPPC3-205ENST00000462715 MUSTN1Q8IVN3 82 aa8.56□□□□□ -1.04
TRAPPC3-205ENST00000462715 NPBQ8NG41 125 aa8.56□□□□□ -1.04
TRAPPC3-205ENST00000462715 Q8TAT8 98 aa8.56□□□□□ -1.04
TRAPPC3-205ENST00000462715 C16orf95Q9H693 158 aa8.56□□□□□ -1.04
TRAPPC3-205ENST00000462715 LINC00527Q9UJ94 153 aa8.56□□□□□ -1.04
TRAPPC3-205ENST00000462715 COL6A5A8TX70 2615 aa8.56□□□□□ -1.04
TRAPPC3-205ENST00000462715 TMEM89A2RUT3 159 aa8.56□□□□□ -1.04
TRAPPC3-205ENST00000462715 Q8N9W7 124 aa8.56□□□□□ -1.04
TRAPPC3-205ENST00000462715 KIR2DL5BQ8NHK3 375 aa8.56□□□□□ -1.04
TRAPPC3-205ENST00000462715 DPH3Q96FX2 82 aa8.56□□□□□ -1.04
TRAPPC3-205ENST00000462715 LENEPQ9Y5L5 61 aa8.56□□□□□ -1.04
TRAPPC3-205ENST00000462715 TSPEAR-AS2P59090 65 aa8.55□□□□□ -1.04
TRAPPC3-205ENST00000462715 BLCAPP62952 87 aa8.55□□□□□ -1.04
TRAPPC3-205ENST00000462715 DUX3Q96PT4 197 aa8.55□□□□□ -1.04
TRAPPC3-205ENST00000462715 TRAV26-2A0A0B4J265 109 aa8.55□□□□□ -1.04
TRAPPC3-205ENST00000462715 CNTFRP26992 372 aa8.55□□□□□ -1.04
TRAPPC3-205ENST00000462715 Q8N2B8 174 aa8.55□□□□□ -1.04
TRAPPC3-205ENST00000462715 C3orf56Q8N813 242 aa8.55□□□□□ -1.04
TRAPPC3-205ENST00000462715 ZNF702PQ9H963 129 aa8.55□□□□□ -1.04
TRAPPC3-205ENST00000462715 CLPSL1A2RUU4 121 aa8.54□□□□□ -1.04
TRAPPC3-205ENST00000462715 DAND5Q8N907 189 aa8.54□□□□□ -1.04
TRAPPC3-205ENST00000462715 EDA2RQ9HAV5 297 aa8.54□□□□□ -1.04
TRAPPC3-205ENST00000462715 IGHV4OR15-8A0A075B7B6 117 aa8.54□□□□□ -1.04
TRAPPC3-205ENST00000462715 A0A087WW49 117 aa8.54□□□□□ -1.04
TRAPPC3-205ENST00000462715 LINC01006Q8NI28 216 aa8.54□□□□□ -1.04
TRAPPC3-205ENST00000462715 DCANP1Q8TF63 244 aa8.54□□□□□ -1.04
TRAPPC3-205ENST00000462715 KLK15Q9H2R5 256 aa8.54□□□□□ -1.04
TRAPPC3-205ENST00000462715 NDUFC2-KCTD14E9PQ53 114 aa8.53□□□□□ -1.04
TRAPPC3-205ENST00000462715 F8WDY8 70 aa8.53□□□□□ -1.04
TRAPPC3-205ENST00000462715 TSHBP01222 138 aa8.53□□□□□ -1.04
TRAPPC3-205ENST00000462715 SMAD5-AS1Q9Y6J3 95 aa8.53□□□□□ -1.04
TRAPPC3-205ENST00000462715 IGHG2P01859 326 aa8.53□□□□□ -1.04
TRAPPC3-205ENST00000462715 CEMP1Q6PRD7 247 aaPredicted RBP8.53□□□□□ -1.04
TRAPPC3-205ENST00000462715 C9orf47Q6ZRZ4 202 aa8.52□□□□□ -1.05
TRAPPC3-205ENST00000462715 C11orf21Q9P2W6 132 aa8.52□□□□□ -1.05
TRAPPC3-205ENST00000462715 ZNF22P17026 224 aaPredicted RBP8.51□□□□□ -1.05
TRAPPC3-205ENST00000462715 C14orf178Q8N769 122 aaPredicted RBP8.51□□□□□ -1.05
TRAPPC3-205ENST00000462715 MDFIQ99750 246 aa8.51□□□□□ -1.05
TRAPPC3-205ENST00000462715 ZFAND3Q9H8U3 227 aa8.51□□□□□ -1.05
TRAPPC3-205ENST00000462715 IGHV7-81A0A0B4J1V7 117 aa8.5□□□□□ -1.05
TRAPPC3-205ENST00000462715 H7C2G1 150 aa8.5□□□□□ -1.05
TRAPPC3-205ENST00000462715 VCYO14598 125 aa8.5□□□□□ -1.05
TRAPPC3-205ENST00000462715 PROK1P58294 105 aa8.5□□□□□ -1.05
TRAPPC3-205ENST00000462715 GPHB5Q86YW7 130 aa8.5□□□□□ -1.05
TRAPPC3-205ENST00000462715 TP53TG1Q9Y2A0 90 aa8.5□□□□□ -1.05
TRAPPC3-205ENST00000462715 TENM1Q9UKZ4 2725 aa8.5□□□□□ -1.05
TRAPPC3-205ENST00000462715 IGLV11-55A0A075B6I3 123 aa8.5□□□□□ -1.05
TRAPPC3-205ENST00000462715 A0A0J9YXY3 114 aa8.5□□□□□ -1.05
TRAPPC3-205ENST00000462715 TIMM17BO60830 172 aa8.5□□□□□ -1.05
TRAPPC3-205ENST00000462715 INAFM2P0DMQ5 153 aa8.5□□□□□ -1.05
TRAPPC3-205ENST00000462715 FAM222AQ5U5X8 452 aa8.5□□□□□ -1.05
TRAPPC3-205ENST00000462715 ZNF580Q9UK33 172 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms