RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 OR5AS1Q8N127 324 aa1.3□□□□□ -2.2
SMC4-203ENST00000462668 WFDC11Q8NEX6 87 aa1.3□□□□□ -2.2
SMC4-203ENST00000462668 VPS25Q9BRG1 176 aa1.3□□□□□ -2.2
SMC4-203ENST00000462668 CR1P17927 2039 aa1.3□□□□□ -2.2
SMC4-203ENST00000462668 BRWD1Q9NSI6 2320 aa1.3□□□□□ -2.2
SMC4-203ENST00000462668 SHANK1Q9Y566 2161 aa1.29□□□□□ -2.2
SMC4-203ENST00000462668 INE1O15225 51 aa1.29□□□□□ -2.2
SMC4-203ENST00000462668 ERC2-IT1O76042 136 aa1.29□□□□□ -2.2
SMC4-203ENST00000462668 TPT1P13693 172 aaKnown RBP1.29□□□□□ -2.2
SMC4-203ENST00000462668 ATP11AUNQ6ZP68 121 aa1.29□□□□□ -2.2
SMC4-203ENST00000462668 ATOH7Q8N100 152 aa1.29□□□□□ -2.2
SMC4-203ENST00000462668 MUCL1Q96DR8 90 aa1.29□□□□□ -2.2
SMC4-203ENST00000462668 MUC5BQ9HC84 5762 aaPredicted RBP1.29□□□□□ -2.2
SMC4-203ENST00000462668 TMEM258P61165 79 aa1.29□□□□□ -2.2
SMC4-203ENST00000462668 OR10AG1Q8NH19 301 aa1.29□□□□□ -2.2
SMC4-203ENST00000462668 CLEC2BQ92478 149 aa1.29□□□□□ -2.2
SMC4-203ENST00000462668 TMEM203Q969S6 136 aa1.29□□□□□ -2.2
SMC4-203ENST00000462668 OR4C12Q96R67 309 aa1.29□□□□□ -2.2
SMC4-203ENST00000462668 SNRNP25Q9BV90 132 aaKnown RBP1.29□□□□□ -2.2
SMC4-203ENST00000462668 LOC110117498A0A087WWA1 95 aa1.29□□□□□ -2.2
SMC4-203ENST00000462668 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.29□□□□□ -2.2
SMC4-203ENST00000462668 PROSCO94903 275 aa1.29□□□□□ -2.2
SMC4-203ENST00000462668 RPL26P61254 145 aaKnown RBP1.29□□□□□ -2.2
SMC4-203ENST00000462668 RNASE10Q5GAN6 216 aaKnown RBP1.29□□□□□ -2.2
SMC4-203ENST00000462668 SCIMPQ6UWF3 145 aa1.29□□□□□ -2.2
SMC4-203ENST00000462668 ZCCHC23Q6ZST2 131 aa1.29□□□□□ -2.2
SMC4-203ENST00000462668 ZNF714Q96N38 554 aa1.29□□□□□ -2.2
SMC4-203ENST00000462668 C22orf24Q9Y442 160 aa1.29□□□□□ -2.2
SMC4-203ENST00000462668 IGF2RP11717 2491 aa1.29□□□□□ -2.2
SMC4-203ENST00000462668 NAV2Q8IVL1 2488 aa1.29□□□□□ -2.2
SMC4-203ENST00000462668 GNG7O60262 68 aa1.29□□□□□ -2.2
SMC4-203ENST00000462668 OTOSQ8NHW6 89 aa1.29□□□□□ -2.2
SMC4-203ENST00000462668 SFT2D1Q8WV19 159 aa1.29□□□□□ -2.2
SMC4-203ENST00000462668 RAB37Q96AX2 223 aa1.29□□□□□ -2.2
SMC4-203ENST00000462668 C14orf144Q96I85 54 aa1.29□□□□□ -2.2
SMC4-203ENST00000462668 CEP295Q9C0D2 2601 aa1.29□□□□□ -2.2
SMC4-203ENST00000462668 SPAG17Q6Q759 2223 aa1.28□□□□□ -2.2
SMC4-203ENST00000462668 A0A0J9YY99 117 aa1.28□□□□□ -2.2
SMC4-203ENST00000462668 CDC42EP2O14613 210 aa1.28□□□□□ -2.2
SMC4-203ENST00000462668 MGST1P10620 155 aaKnown RBP1.28□□□□□ -2.2
SMC4-203ENST00000462668 OCIAD2Q56VL3 154 aa1.28□□□□□ -2.2
SMC4-203ENST00000462668 FP248Q71RG6 208 aaPredicted RBP1.28□□□□□ -2.2
SMC4-203ENST00000462668 IFT20Q8IY31 132 aa1.28□□□□□ -2.2
SMC4-203ENST00000462668 DNAH5Q8TE73 4624 aa1.28□□□□□ -2.2
SMC4-203ENST00000462668 PNMA8CA0A1B0GUJ8 204 aa1.28□□□□□ -2.2
SMC4-203ENST00000462668 IFITM5A6NNB3 132 aa1.28□□□□□ -2.2
SMC4-203ENST00000462668 USP9XQ93008 2570 aaPredicted RBP1.28□□□□□ -2.2
SMC4-203ENST00000462668 MYO9AB2RTY4 2548 aa1.28□□□□□ -2.21
SMC4-203ENST00000462668 FNDC10F2Z333 226 aa1.28□□□□□ -2.21
SMC4-203ENST00000462668 CRPP02741 224 aa1.28□□□□□ -2.21
SMC4-203ENST00000462668 CDK6Q00534 326 aa1.28□□□□□ -2.21
SMC4-203ENST00000462668 LINC00052Q96N35 136 aa1.28□□□□□ -2.21
SMC4-203ENST00000462668 CST11Q9H112 138 aa1.28□□□□□ -2.21
SMC4-203ENST00000462668 SAR1AQ9NR31 198 aa1.28□□□□□ -2.21
SMC4-203ENST00000462668 LOC107986453A0A1B0GWG9 222 aa1.27□□□□□ -2.21
SMC4-203ENST00000462668 TCRBV4S1A1TA0A5B7 111 aa1.27□□□□□ -2.21
SMC4-203ENST00000462668 YPEL1O60688 119 aa1.27□□□□□ -2.21
SMC4-203ENST00000462668 HIST1H1BP16401 226 aaKnown RBP1.27□□□□□ -2.21
SMC4-203ENST00000462668 OR5AK2Q8NH90 309 aa1.27□□□□□ -2.21
SMC4-203ENST00000462668 TXNDC17Q9BRA2 123 aa1.27□□□□□ -2.21
SMC4-203ENST00000462668 FKBP11Q9NYL4 201 aa1.27□□□□□ -2.21
SMC4-203ENST00000462668 TPRKBQ9Y3C4 175 aa1.27□□□□□ -2.21
SMC4-203ENST00000462668 PRRC2AP48634 2157 aaKnown RBP1.27□□□□□ -2.21
SMC4-203ENST00000462668 CEP250Q9BV73 2442 aa1.27□□□□□ -2.21
SMC4-203ENST00000462668 DNAH8Q96JB1 4490 aa1.27□□□□□ -2.21
SMC4-203ENST00000462668 M0R233 179 aa1.27□□□□□ -2.21
SMC4-203ENST00000462668 DEFB103AP81534 67 aa1.27□□□□□ -2.21
SMC4-203ENST00000462668 ZFC3H1O60293 1989 aaKnown RBP1.27□□□□□ -2.21
SMC4-203ENST00000462668 TRAV10A0A0B4J240 114 aa1.27□□□□□ -2.21
SMC4-203ENST00000462668 SPAARA0A1B0GVQ0 90 aa1.27□□□□□ -2.21
SMC4-203ENST00000462668 KRTAP5-8O75690 187 aa1.27□□□□□ -2.21
SMC4-203ENST00000462668 IGKV1-17P01599 117 aa1.27□□□□□ -2.21
SMC4-203ENST00000462668 CXCL8P10145 99 aa1.27□□□□□ -2.21
SMC4-203ENST00000462668 S100PP25815 95 aa1.27□□□□□ -2.21
SMC4-203ENST00000462668 COPZ1P61923 177 aa1.27□□□□□ -2.21
SMC4-203ENST00000462668 MIR22HGQ0VDD5 57 aa1.27□□□□□ -2.21
SMC4-203ENST00000462668 IDO2Q6ZQW0 420 aa1.27□□□□□ -2.21
SMC4-203ENST00000462668 AP1S3Q96PC3 154 aa1.27□□□□□ -2.21
SMC4-203ENST00000462668 CXorf51AA0A1B0GTR3 108 aa1.26□□□□□ -2.21
SMC4-203ENST00000462668 FAM92AA1XBS5 289 aa1.26□□□□□ -2.21
SMC4-203ENST00000462668 TNFP01375 233 aa1.26□□□□□ -2.21
SMC4-203ENST00000462668 MT-ND6P03923 174 aa1.26□□□□□ -2.21
SMC4-203ENST00000462668 TSTD1Q8NFU3 115 aa1.26□□□□□ -2.21
SMC4-203ENST00000462668 PP6455Q8WZ26 134 aa1.26□□□□□ -2.21
SMC4-203ENST00000462668 NAA38Q9BRA0 125 aaKnown RBP1.26□□□□□ -2.21
SMC4-203ENST00000462668 FLGP20930 4061 aaPredicted RBP1.26□□□□□ -2.21
SMC4-203ENST00000462668 J3QKU1 62 aa1.26□□□□□ -2.21
SMC4-203ENST00000462668 SMIM24O75264 130 aa1.26□□□□□ -2.21
SMC4-203ENST00000462668 OR2T35Q8NGX2 323 aa1.26□□□□□ -2.21
SMC4-203ENST00000462668 ATP6V0E2Q8NHE4 81 aa1.26□□□□□ -2.21
SMC4-203ENST00000462668 USP9YO00507 2555 aaPredicted RBP1.26□□□□□ -2.21
SMC4-203ENST00000462668 FASNP49327 2511 aaKnown RBP1.26□□□□□ -2.21
SMC4-203ENST00000462668 CORTO00230 105 aa1.26□□□□□ -2.21
SMC4-203ENST00000462668 GUCA1AP43080 201 aaPredicted RBP1.26□□□□□ -2.21
SMC4-203ENST00000462668 TMEM254Q8TBM7 123 aa1.26□□□□□ -2.21
SMC4-203ENST00000462668 C4orf3Q8WVX3 66 aa1.26□□□□□ -2.21
SMC4-203ENST00000462668 CIB3Q96Q77 187 aaPredicted RBP1.26□□□□□ -2.21
SMC4-203ENST00000462668 ZDBF2Q9HCK1 2354 aa1.26□□□□□ -2.21
SMC4-203ENST00000462668 TRAV12-2A0A075B6T6 113 aa1.26□□□□□ -2.21
SMC4-203ENST00000462668 ZNF736B4DX44 427 aaPredicted RBP1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms