RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 CIRBP-AS1Q8TBR5 109 aa11.34□□□□□ -0.59
TOP3A-202ENST00000461127 PTH2Q96A98 100 aa11.34□□□□□ -0.59
TOP3A-202ENST00000461127 AP1S3Q96PC3 154 aa11.34□□□□□ -0.59
TOP3A-202ENST00000461127 RASL11AQ6T310 242 aa11.33□□□□□ -0.6
TOP3A-202ENST00000461127 YPEL4Q96NS1 127 aa11.33□□□□□ -0.6
TOP3A-202ENST00000461127 TRAV8-3A0A0A6YYJ7 113 aa11.32□□□□□ -0.6
TOP3A-202ENST00000461127 A0A1B0GXF2 115 aa11.32□□□□□ -0.6
TOP3A-202ENST00000461127 SMIM17P0DL12 118 aa11.32□□□□□ -0.6
TOP3A-202ENST00000461127 COX19Q49B96 90 aa11.32□□□□□ -0.6
TOP3A-202ENST00000461127 PIK3CD-AS1Q5SR53 167 aa11.32□□□□□ -0.6
TOP3A-202ENST00000461127 RPL37AP61513 92 aaKnown RBP11.31□□□□□ -0.6
TOP3A-202ENST00000461127 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.31□□□□□ -0.6
TOP3A-202ENST00000461127 COLCA2A8K830 154 aa11.3□□□□□ -0.6
TOP3A-202ENST00000461127 A8MWV9 139 aa11.3□□□□□ -0.6
TOP3A-202ENST00000461127 LELP1Q5T871 98 aa11.3□□□□□ -0.6
TOP3A-202ENST00000461127 COX11Q9Y6N1 276 aa11.3□□□□□ -0.6
TOP3A-202ENST00000461127 GATA1P15976 413 aaPredicted RBP11.29□□□□□ -0.6
TOP3A-202ENST00000461127 FAM74A4Q5TZK3 123 aa11.29□□□□□ -0.6
TOP3A-202ENST00000461127 C14orf178Q8N769 122 aaPredicted RBP11.29□□□□□ -0.6
TOP3A-202ENST00000461127 Q8N976 141 aa11.29□□□□□ -0.6
TOP3A-202ENST00000461127 TMEM191AQ9H0A3 160 aa11.29□□□□□ -0.6
TOP3A-202ENST00000461127 A0A087WWL8 130 aa11.28□□□□□ -0.6
TOP3A-202ENST00000461127 HLA-DQA1P01909 254 aa11.28□□□□□ -0.6
TOP3A-202ENST00000461127 MT-ND6P03923 174 aa11.28□□□□□ -0.6
TOP3A-202ENST00000461127 RAB5AP20339 215 aa11.28□□□□□ -0.6
TOP3A-202ENST00000461127 ATP6V0E2Q8NHE4 81 aa11.28□□□□□ -0.6
TOP3A-202ENST00000461127 BAALCQ8WXS3 180 aa11.28□□□□□ -0.6
TOP3A-202ENST00000461127 PRADC1Q9BSG0 188 aa11.28□□□□□ -0.6
TOP3A-202ENST00000461127 GNB1LQ9BYB4 327 aa11.28□□□□□ -0.6
TOP3A-202ENST00000461127 DPH3P1Q9H4G8 78 aa11.28□□□□□ -0.6
TOP3A-202ENST00000461127 JPT2Q9H910 190 aa11.28□□□□□ -0.6
TOP3A-202ENST00000461127 MGPP08493 103 aa11.27□□□□□ -0.61
TOP3A-202ENST00000461127 RPS10P46783 165 aaKnown RBP11.27□□□□□ -0.61
TOP3A-202ENST00000461127 CFAP126Q5VTH2 177 aa11.27□□□□□ -0.61
TOP3A-202ENST00000461127 TMEM136Q6ZRR5 245 aa11.27□□□□□ -0.61
TOP3A-202ENST00000461127 GATD1Q8NB37 220 aa11.27□□□□□ -0.61
TOP3A-202ENST00000461127 PKHD1L1Q86WI1 4243 aa11.26□□□□□ -0.61
TOP3A-202ENST00000461127 RHODO00212 210 aa11.26□□□□□ -0.61
TOP3A-202ENST00000461127 RMI2Q96E14 147 aa11.26□□□□□ -0.61
TOP3A-202ENST00000461127 GTSF1LQ9H1H1 148 aa11.26□□□□□ -0.61
TOP3A-202ENST00000461127 TRAPPC1Q9Y5R8 145 aa11.26□□□□□ -0.61
TOP3A-202ENST00000461127 F5H697 171 aa11.25□□□□□ -0.61
TOP3A-202ENST00000461127 APCSP02743 223 aa11.25□□□□□ -0.61
TOP3A-202ENST00000461127 RHOHQ15669 191 aa11.25□□□□□ -0.61
TOP3A-202ENST00000461127 ZNF56Q15929 161 aa11.25□□□□□ -0.61
TOP3A-202ENST00000461127 FAM104BQ5XKR9 115 aa11.25□□□□□ -0.61
TOP3A-202ENST00000461127 AMN1Q8IY45 258 aa11.25□□□□□ -0.61
TOP3A-202ENST00000461127 SLC25A29Q8N8R3 303 aa11.25□□□□□ -0.61
TOP3A-202ENST00000461127 SAMD10Q9BYL1 202 aa11.25□□□□□ -0.61
TOP3A-202ENST00000461127 MRPL18Q9H0U6 180 aaKnown RBP11.25□□□□□ -0.61
TOP3A-202ENST00000461127 IGHV3-73A0A0B4J1V6 119 aa11.24□□□□□ -0.61
TOP3A-202ENST00000461127 FABP9Q0Z7S8 132 aa11.24□□□□□ -0.61
TOP3A-202ENST00000461127 ZFP2Q6ZN57 461 aa11.24□□□□□ -0.61
TOP3A-202ENST00000461127 RNF213Q63HN8 5207 aa11.23□□□□□ -0.61
TOP3A-202ENST00000461127 CIDEAO60543 219 aa11.23□□□□□ -0.61
TOP3A-202ENST00000461127 MT1HL1P0DM35 61 aa11.23□□□□□ -0.61
TOP3A-202ENST00000461127 HNRNPA3P51991 378 aaKnown RBP11.23□□□□□ -0.61
TOP3A-202ENST00000461127 KIF25-AS1Q9Y6Z4 181 aa11.23□□□□□ -0.61
TOP3A-202ENST00000461127 TRBV6-4A0A1B0GX49 114 aa11.22□□□□□ -0.61
TOP3A-202ENST00000461127 RAB4AP20338 218 aa11.22□□□□□ -0.61
TOP3A-202ENST00000461127 LRP2P98164 4655 aa11.21□□□□□ -0.61
TOP3A-202ENST00000461127 CKS2P33552 79 aa11.21□□□□□ -0.61
TOP3A-202ENST00000461127 MRPL51Q4U2R6 128 aaKnown RBP11.21□□□□□ -0.61
TOP3A-202ENST00000461127 UFSP1Q6NVU6 142 aa11.21□□□□□ -0.61
TOP3A-202ENST00000461127 DAZ4Q86SG3 579 aaKnown RBP11.21□□□□□ -0.61
TOP3A-202ENST00000461127 Q8N3U1 123 aa11.21□□□□□ -0.61
TOP3A-202ENST00000461127 MRAP2Q96G30 205 aa11.21□□□□□ -0.61
TOP3A-202ENST00000461127 RNF185Q96GF1 192 aa11.21□□□□□ -0.61
TOP3A-202ENST00000461127 DAZ3Q9NR90 486 aaKnown RBP11.21□□□□□ -0.61
TOP3A-202ENST00000461127 TRGC2P03986 189 aa11.2□□□□□ -0.62
TOP3A-202ENST00000461127 Q6ZRU5 148 aa11.2□□□□□ -0.62
TOP3A-202ENST00000461127 IGKV2D-24A0A075B6R9 120 aa11.19□□□□□ -0.62
TOP3A-202ENST00000461127 TRAV26-2A0A0B4J265 109 aa11.19□□□□□ -0.62
TOP3A-202ENST00000461127 H7C1H1 209 aa11.19□□□□□ -0.62
TOP3A-202ENST00000461127 PPBPP02775 128 aa11.19□□□□□ -0.62
TOP3A-202ENST00000461127 KIAA1644Q3SXP7 199 aa11.19□□□□□ -0.62
TOP3A-202ENST00000461127 SUMO4Q6EEV6 95 aa11.19□□□□□ -0.62
TOP3A-202ENST00000461127 D6R8Y8 96 aa11.18□□□□□ -0.62
TOP3A-202ENST00000461127 SMKR1H3BMG3 65 aa11.18□□□□□ -0.62
TOP3A-202ENST00000461127 NCR2O95944 276 aa11.18□□□□□ -0.62
TOP3A-202ENST00000461127 C14orf177Q52M58 125 aa11.18□□□□□ -0.62
TOP3A-202ENST00000461127 ORMDL3Q8N138 153 aa11.18□□□□□ -0.62
TOP3A-202ENST00000461127 PRELID3AQ96N28 172 aa11.17□□□□□ -0.62
TOP3A-202ENST00000461127 C1orf196B1AJZ1 125 aa11.16□□□□□ -0.62
TOP3A-202ENST00000461127 PPP1R17O96001 155 aa11.16□□□□□ -0.62
TOP3A-202ENST00000461127 M0QY20 66 aa11.15□□□□□ -0.62
TOP3A-202ENST00000461127 ALKBH7Q9BT30 221 aaPredicted RBP11.14□□□□□ -0.63
TOP3A-202ENST00000461127 LAMTOR2Q9Y2Q5 125 aa11.14□□□□□ -0.63
TOP3A-202ENST00000461127 TNXBP22105 4242 aa11.13□□□□□ -0.63
TOP3A-202ENST00000461127 GAS8-AS1O95177 125 aa11.13□□□□□ -0.63
TOP3A-202ENST00000461127 TNFRSF6BO95407 300 aa11.13□□□□□ -0.63
TOP3A-202ENST00000461127 NPYP01303 97 aa11.13□□□□□ -0.63
TOP3A-202ENST00000461127 RPL39LQ96EH5 51 aaKnown RBP11.13□□□□□ -0.63
TOP3A-202ENST00000461127 NIT2Q9NQR4 276 aa11.13□□□□□ -0.63
TOP3A-202ENST00000461127 TRBV10-1A0A0K0K1A3 114 aa11.12□□□□□ -0.63
TOP3A-202ENST00000461127 PHOX2AO14813 284 aa11.12□□□□□ -0.63
TOP3A-202ENST00000461127 RAB5BP61020 215 aa11.12□□□□□ -0.63
TOP3A-202ENST00000461127 NRACQ8N912 160 aa11.12□□□□□ -0.63
TOP3A-202ENST00000461127 DNAJC30Q96LL9 226 aa11.12□□□□□ -0.63
TOP3A-202ENST00000461127 ST20Q9HBF5 79 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms