RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 C20orf203Q8NBC4 194 aa11.48□□□□□ -0.57
SSR4-206ENST00000460616 FAM223BA6NKX1 122 aa11.48□□□□□ -0.57
SSR4-206ENST00000460616 KLLNB2CW77 178 aa11.48□□□□□ -0.57
SSR4-206ENST00000460616 TRBV12-3P01733 135 aa11.48□□□□□ -0.57
SSR4-206ENST00000460616 FAM223AQ8IWN6 122 aa11.48□□□□□ -0.57
SSR4-206ENST00000460616 CLEC2BQ92478 149 aa11.48□□□□□ -0.57
SSR4-206ENST00000460616 TIMM21Q9BVV7 248 aa11.48□□□□□ -0.57
SSR4-206ENST00000460616 TRAV41A0A0B4J266 112 aa11.47□□□□□ -0.57
SSR4-206ENST00000460616 NDUFA4O00483 81 aa11.47□□□□□ -0.57
SSR4-206ENST00000460616 SAA4P35542 130 aa11.47□□□□□ -0.57
SSR4-206ENST00000460616 DEFB121Q5J5C9 76 aa11.47□□□□□ -0.57
SSR4-206ENST00000460616 ADAMTSL4-AS1Q5T5F5 129 aa11.47□□□□□ -0.57
SSR4-206ENST00000460616 TMEM126AQ9H061 195 aa11.47□□□□□ -0.57
SSR4-206ENST00000460616 IGLV4-3A0A075B6K6 122 aa11.47□□□□□ -0.57
SSR4-206ENST00000460616 UNC79Q9P2D8 2635 aa11.46□□□□□ -0.57
SSR4-206ENST00000460616 TRAV12-3A0A0B4J271 114 aa11.46□□□□□ -0.57
SSR4-206ENST00000460616 Q6ZSV7 163 aa11.46□□□□□ -0.57
SSR4-206ENST00000460616 C5orf56Q8N8D9 126 aa11.46□□□□□ -0.57
SSR4-206ENST00000460616 TRBV7-7A0A0K0K1E9 115 aa11.46□□□□□ -0.58
SSR4-206ENST00000460616 C3orf56Q8N813 242 aa11.46□□□□□ -0.58
SSR4-206ENST00000460616 TNFRSF18Q9Y5U5 241 aa11.46□□□□□ -0.58
SSR4-206ENST00000460616 ITPR2Q14571 2701 aa11.46□□□□□ -0.58
SSR4-206ENST00000460616 TRGV11A0A075B6L2 103 aa11.45□□□□□ -0.58
SSR4-206ENST00000460616 LST1O00453 97 aa11.45□□□□□ -0.58
SSR4-206ENST00000460616 I3L3M4 83 aa11.45□□□□□ -0.58
SSR4-206ENST00000460616 SPANXDQ9BXN6 97 aa11.45□□□□□ -0.58
SSR4-206ENST00000460616 SPANXCQ9NY87 97 aa11.45□□□□□ -0.58
SSR4-206ENST00000460616 TRAV8-3A0A0A6YYJ7 113 aa11.44□□□□□ -0.58
SSR4-206ENST00000460616 NPC2P61916 151 aa11.44□□□□□ -0.58
SSR4-206ENST00000460616 TMEM101Q96IK0 257 aa11.44□□□□□ -0.58
SSR4-206ENST00000460616 MED13LQ71F56 2210 aa11.44□□□□□ -0.58
SSR4-206ENST00000460616 TMEM219Q86XT9 240 aa11.44□□□□□ -0.58
SSR4-206ENST00000460616 LINC01587Q99440 93 aa11.44□□□□□ -0.58
SSR4-206ENST00000460616 NDUFA12Q9UI09 145 aa11.44□□□□□ -0.58
SSR4-206ENST00000460616 BRI3O95415 125 aa11.43□□□□□ -0.58
SSR4-206ENST00000460616 MIAQ16674 131 aa11.43□□□□□ -0.58
SSR4-206ENST00000460616 RHPN1-AS1Q9BWJ2 59 aa11.43□□□□□ -0.58
SSR4-206ENST00000460616 NAV2Q8IVL1 2488 aa11.43□□□□□ -0.58
SSR4-206ENST00000460616 TMEM95Q3KNT9 176 aa11.43□□□□□ -0.58
SSR4-206ENST00000460616 IGHV3-16A0A0C4DH30 117 aa11.42□□□□□ -0.58
SSR4-206ENST00000460616 IGHV1-58A0A0C4DH39 117 aa11.42□□□□□ -0.58
SSR4-206ENST00000460616 ATP5J2P56134 94 aa11.42□□□□□ -0.58
SSR4-206ENST00000460616 C9orf85Q96MD7 179 aa11.42□□□□□ -0.58
SSR4-206ENST00000460616 PDZD2O15018 2839 aa11.42□□□□□ -0.58
SSR4-206ENST00000460616 MRPS36P82909 103 aaKnown RBP11.42□□□□□ -0.58
SSR4-206ENST00000460616 CD28P10747 220 aa11.41□□□□□ -0.58
SSR4-206ENST00000460616 C19orf54Q5BKX5 351 aa11.41□□□□□ -0.58
SSR4-206ENST00000460616 TMEM61Q8N0U2 210 aa11.41□□□□□ -0.58
SSR4-206ENST00000460616 ABCA2Q9BZC7 2435 aa11.41□□□□□ -0.58
SSR4-206ENST00000460616 FAM236AA0A1B0GUQ0 79 aa11.41□□□□□ -0.58
SSR4-206ENST00000460616 FAM236BA0A1B0GV22 79 aa11.41□□□□□ -0.58
SSR4-206ENST00000460616 IGHV3-11P01762 117 aa11.41□□□□□ -0.58
SSR4-206ENST00000460616 BPESC1Q9GZL8 116 aa11.4□□□□□ -0.58
SSR4-206ENST00000460616 IMUPQ9GZP8 106 aa11.4□□□□□ -0.58
SSR4-206ENST00000460616 YAE1D1Q9NRH1 226 aa11.4□□□□□ -0.58
SSR4-206ENST00000460616 VPREB3Q9UKI3 123 aa11.4□□□□□ -0.58
SSR4-206ENST00000460616 ACYP1P07311 99 aa11.4□□□□□ -0.59
SSR4-206ENST00000460616 NPFFO15130 113 aa11.39□□□□□ -0.59
SSR4-206ENST00000460616 ID1P41134 155 aa11.39□□□□□ -0.59
SSR4-206ENST00000460616 VSIG2Q96IQ7 327 aa11.39□□□□□ -0.59
SSR4-206ENST00000460616 PYGO1Q9Y3Y4 419 aa11.39□□□□□ -0.59
SSR4-206ENST00000460616 A8MZ25 164 aa11.38□□□□□ -0.59
SSR4-206ENST00000460616 PPDPFQ9H3Y8 114 aa11.38□□□□□ -0.59
SSR4-206ENST00000460616 MOB4Q9Y3A3 225 aa11.38□□□□□ -0.59
SSR4-206ENST00000460616 CEMP1Q6PRD7 247 aaPredicted RBP11.38□□□□□ -0.59
SSR4-206ENST00000460616 FAM104AQ969W3 186 aa11.38□□□□□ -0.59
SSR4-206ENST00000460616 CCDC168Q8NDH2 2452 aa11.38□□□□□ -0.59
SSR4-206ENST00000460616 TRAV12-2A0A075B6T6 113 aa11.37□□□□□ -0.59
SSR4-206ENST00000460616 IGHV4-30-2A0A087WSY4 118 aa11.37□□□□□ -0.59
SSR4-206ENST00000460616 RNASE13Q5GAN3 156 aaKnown RBP11.37□□□□□ -0.59
SSR4-206ENST00000460616 ZNF469Q96JG9 3925 aaPredicted RBP11.37□□□□□ -0.59
SSR4-206ENST00000460616 USMG5Q96IX5 58 aa11.36□□□□□ -0.59
SSR4-206ENST00000460616 DUX5Q96PT3 197 aa11.36□□□□□ -0.59
SSR4-206ENST00000460616 IGKV3-20P01619 116 aa11.36□□□□□ -0.59
SSR4-206ENST00000460616 DEFB113Q30KQ7 82 aa11.36□□□□□ -0.59
SSR4-206ENST00000460616 DAZ1Q9NQZ3 744 aaKnown RBP11.36□□□□□ -0.59
SSR4-206ENST00000460616 PRRC2AP48634 2157 aaKnown RBP11.35□□□□□ -0.59
SSR4-206ENST00000460616 C10orf105Q8TEF2 133 aa11.35□□□□□ -0.59
SSR4-206ENST00000460616 C9orf153Q5TBE3 101 aa11.35□□□□□ -0.59
SSR4-206ENST00000460616 DAND5Q8N907 189 aa11.35□□□□□ -0.59
SSR4-206ENST00000460616 DCANP1Q8TF63 244 aa11.35□□□□□ -0.59
SSR4-206ENST00000460616 BAHCC1Q9P281 2608 aa11.34□□□□□ -0.59
SSR4-206ENST00000460616 TINCRA0A1B0GVN0 87 aa11.34□□□□□ -0.59
SSR4-206ENST00000460616 C3orf22Q8N5N4 141 aa11.34□□□□□ -0.59
SSR4-206ENST00000460616 IGHV1OR15-1A0A075B7D0 117 aa11.34□□□□□ -0.59
SSR4-206ENST00000460616 IGHV4-61A0A0C4DH41 118 aa11.34□□□□□ -0.59
SSR4-206ENST00000460616 LINC00694P0DN24 101 aa11.34□□□□□ -0.59
SSR4-206ENST00000460616 EDN2P20800 178 aa11.34□□□□□ -0.59
SSR4-206ENST00000460616 CITED2Q99967 270 aaPredicted RBP11.34□□□□□ -0.59
SSR4-206ENST00000460616 ZFHX3Q15911 3703 aa11.34□□□□□ -0.59
SSR4-206ENST00000460616 TIMM17BO60830 172 aa11.33□□□□□ -0.6
SSR4-206ENST00000460616 PF4V1P10720 104 aa11.33□□□□□ -0.6
SSR4-206ENST00000460616 LINC00643Q86TS7 51 aa11.33□□□□□ -0.6
SSR4-206ENST00000460616 PIMREGQ9BSJ6 248 aa11.33□□□□□ -0.6
SSR4-206ENST00000460616 CR1P17927 2039 aa11.33□□□□□ -0.6
SSR4-206ENST00000460616 KRTAP1-3Q8IUG1 177 aa11.33□□□□□ -0.6
SSR4-206ENST00000460616 SMCR5Q8TEV8 140 aa11.33□□□□□ -0.6
SSR4-206ENST00000460616 NDUFA7O95182 113 aa11.32□□□□□ -0.6
SSR4-206ENST00000460616 ZANQ9Y493 2812 aa11.32□□□□□ -0.6
SSR4-206ENST00000460616 CELSR1Q9NYQ6 3014 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms