RNA–Protein interactions for RNA: ENST00000453954.6

TCF3-204, Transcript of transcription factor 3, humanhuman

TSL 5 BASIC

Gene TCF3, Length 3,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-204ENST00000453954 RNF223E7ERA6 249 aa12.86□□□□□ -0.35
TCF3-204ENST00000453954 ICOSQ9Y6W8 199 aa12.86□□□□□ -0.35
TCF3-204ENST00000453954 IGHV1-69DA0A0B4J2H0 117 aa12.85□□□□□ -0.35
TCF3-204ENST00000453954 I3L3M4 83 aa12.85□□□□□ -0.35
TCF3-204ENST00000453954 ADAMTSL4-AS1Q5T5F5 129 aa12.85□□□□□ -0.35
TCF3-204ENST00000453954 FAM223BA6NKX1 122 aa12.85□□□□□ -0.35
TCF3-204ENST00000453954 DEFB136Q30KP8 78 aa12.85□□□□□ -0.35
TCF3-204ENST00000453954 FAM223AQ8IWN6 122 aa12.85□□□□□ -0.35
TCF3-204ENST00000453954 TMEM263Q8WUH6 116 aaKnown RBP12.85□□□□□ -0.35
TCF3-204ENST00000453954 IGHV1OR15-1A0A075B7D0 117 aa12.84□□□□□ -0.35
TCF3-204ENST00000453954 EBI3Q14213 229 aa12.84□□□□□ -0.35
TCF3-204ENST00000453954 TIMM17AQ99595 171 aa12.84□□□□□ -0.35
TCF3-204ENST00000453954 FLNCQ14315 2725 aa12.84□□□□□ -0.35
TCF3-204ENST00000453954 ZNF462Q96JM2 2506 aa12.84□□□□□ -0.35
TCF3-204ENST00000453954 TMEM223A0PJW6 202 aa12.84□□□□□ -0.35
TCF3-204ENST00000453954 C20orf203Q8NBC4 194 aa12.84□□□□□ -0.35
TCF3-204ENST00000453954 LENEPQ9Y5L5 61 aa12.84□□□□□ -0.35
TCF3-204ENST00000453954 IGLV4-3A0A075B6K6 122 aa12.83□□□□□ -0.36
TCF3-204ENST00000453954 M0QY20 66 aa12.82□□□□□ -0.36
TCF3-204ENST00000453954 ATP5J2P56134 94 aa12.82□□□□□ -0.36
TCF3-204ENST00000453954 ZFHX3Q15911 3703 aa12.82□□□□□ -0.36
TCF3-204ENST00000453954 DEFB131AP59861 70 aa12.82□□□□□ -0.36
TCF3-204ENST00000453954 LINC01587Q99440 93 aa12.82□□□□□ -0.36
TCF3-204ENST00000453954 FAM236AA0A1B0GUQ0 79 aa12.81□□□□□ -0.36
TCF3-204ENST00000453954 FAM236BA0A1B0GV22 79 aa12.81□□□□□ -0.36
TCF3-204ENST00000453954 EIF4EBP3O60516 100 aaPredicted RBP12.81□□□□□ -0.36
TCF3-204ENST00000453954 TRGV11A0A075B6L2 103 aa12.81□□□□□ -0.36
TCF3-204ENST00000453954 IGHV1-69P01742 117 aa12.81□□□□□ -0.36
TCF3-204ENST00000453954 LINC00315P59091 139 aa12.81□□□□□ -0.36
TCF3-204ENST00000453954 UBE2E2Q96LR5 201 aa12.81□□□□□ -0.36
TCF3-204ENST00000453954 C11orf68Q9H3H3 251 aaKnown RBP12.81□□□□□ -0.36
TCF3-204ENST00000453954 IGHV4-61A0A0C4DH41 118 aa12.81□□□□□ -0.36
TCF3-204ENST00000453954 TRBV10-2A0A0K0K1G8 114 aa12.81□□□□□ -0.36
TCF3-204ENST00000453954 UTP20O75691 2785 aaKnown RBP12.81□□□□□ -0.36
TCF3-204ENST00000453954 RNASE1P07998 156 aaKnown RBP12.8□□□□□ -0.36
TCF3-204ENST00000453954 LMO4P61968 165 aa12.8□□□□□ -0.36
TCF3-204ENST00000453954 MRPL23Q16540 153 aaKnown RBP12.8□□□□□ -0.36
TCF3-204ENST00000453954 NRGNQ92686 78 aa12.8□□□□□ -0.36
TCF3-204ENST00000453954 U3KQE9 123 aa12.8□□□□□ -0.36
TCF3-204ENST00000453954 DOPEY1Q5JWR5 2465 aa12.8□□□□□ -0.36
TCF3-204ENST00000453954 ANKRD17O75179 2603 aaKnown RBP12.8□□□□□ -0.36
TCF3-204ENST00000453954 LINC01619G3V211 115 aa12.8□□□□□ -0.36
TCF3-204ENST00000453954 GAGE2AQ6NT46 116 aa12.79□□□□□ -0.36
TCF3-204ENST00000453954 CHD6Q8TD26 2715 aa12.79□□□□□ -0.36
TCF3-204ENST00000453954 H7C423 109 aa12.79□□□□□ -0.36
TCF3-204ENST00000453954 NDUFA7O95182 113 aa12.79□□□□□ -0.36
TCF3-204ENST00000453954 CIRBPQ14011 172 aaKnown RBP12.79□□□□□ -0.36
TCF3-204ENST00000453954 KIF25-AS1Q9Y6Z4 181 aa12.79□□□□□ -0.36
TCF3-204ENST00000453954 SHISA2Q6UWI4 295 aa12.78□□□□□ -0.36
TCF3-204ENST00000453954 Q9H8V8 135 aa12.78□□□□□ -0.36
TCF3-204ENST00000453954 TRBV7-9A0A0J9YWB2 115 aa12.78□□□□□ -0.36
TCF3-204ENST00000453954 NHLRC4P0CG21 123 aaPredicted RBP12.78□□□□□ -0.36
TCF3-204ENST00000453954 CELSR2Q9HCU4 2923 aa12.78□□□□□ -0.36
TCF3-204ENST00000453954 K7ENP7 123 aa12.78□□□□□ -0.36
TCF3-204ENST00000453954 Q9HAA7 133 aa12.78□□□□□ -0.36
TCF3-204ENST00000453954 CDKN2A-AS1Q9UH64 79 aa12.78□□□□□ -0.36
TCF3-204ENST00000453954 TRBV27A0A0K0K1C4 114 aa12.77□□□□□ -0.36
TCF3-204ENST00000453954 PRIMA1Q86XR5 153 aa12.77□□□□□ -0.36
TCF3-204ENST00000453954 NXPH4O95158 308 aa12.77□□□□□ -0.37
TCF3-204ENST00000453954 CSMD2Q7Z408 3487 aa12.77□□□□□ -0.37
TCF3-204ENST00000453954 LGALS9O00182 355 aa12.76□□□□□ -0.37
TCF3-204ENST00000453954 IGHV4-59P01825 116 aa12.76□□□□□ -0.37
TCF3-204ENST00000453954 POM121L12Q8N7R1 296 aa12.76□□□□□ -0.37
TCF3-204ENST00000453954 USMG5Q96IX5 58 aa12.76□□□□□ -0.37
TCF3-204ENST00000453954 CFHR3Q02985 330 aa12.76□□□□□ -0.37
TCF3-204ENST00000453954 APRG1Q8IVJ8 170 aa12.76□□□□□ -0.37
TCF3-204ENST00000453954 ODF3Q96PU9 254 aa12.76□□□□□ -0.37
TCF3-204ENST00000453954 XCL2Q9UBD3 114 aa12.76□□□□□ -0.37
TCF3-204ENST00000453954 C11orf71Q6IPW1 123 aa12.75□□□□□ -0.37
TCF3-204ENST00000453954 OR13C6PQ8NH95 151 aa12.75□□□□□ -0.37
TCF3-204ENST00000453954 IGHV4OR15-8A0A075B7B6 117 aa12.75□□□□□ -0.37
TCF3-204ENST00000453954 A0A087WW49 117 aa12.75□□□□□ -0.37
TCF3-204ENST00000453954 RPL32P62910 135 aaKnown RBP12.75□□□□□ -0.37
TCF3-204ENST00000453954 FBN2P35556 2912 aa12.74□□□□□ -0.37
TCF3-204ENST00000453954 SOCS3O14543 225 aa12.74□□□□□ -0.37
TCF3-204ENST00000453954 C9orf153Q5TBE3 101 aa12.74□□□□□ -0.37
TCF3-204ENST00000453954 AMELXQ99217 191 aa12.74□□□□□ -0.37
TCF3-204ENST00000453954 A0A0B4J2C4 111 aa12.74□□□□□ -0.37
TCF3-204ENST00000453954 EDA2RQ9HAV5 297 aa12.74□□□□□ -0.37
TCF3-204ENST00000453954 NBEAL2Q6ZNJ1 2754 aa12.73□□□□□ -0.37
TCF3-204ENST00000453954 A0A1W2PRX2 142 aa12.73□□□□□ -0.37
TCF3-204ENST00000453954 LINC00467Q9BRT7 94 aa12.73□□□□□ -0.37
TCF3-204ENST00000453954 RHOHQ15669 191 aa12.73□□□□□ -0.37
TCF3-204ENST00000453954 C19orf84I3L1E1 186 aa12.72□□□□□ -0.37
TCF3-204ENST00000453954 CITED1Q99966 193 aa12.72□□□□□ -0.37
TCF3-204ENST00000453954 KLLNB2CW77 178 aa12.72□□□□□ -0.37
TCF3-204ENST00000453954 TRGV1A0A0A0MS02 117 aa12.71□□□□□ -0.37
TCF3-204ENST00000453954 A0A0J9YX75 114 aa12.71□□□□□ -0.37
TCF3-204ENST00000453954 PIMREGQ9BSJ6 248 aa12.71□□□□□ -0.37
TCF3-204ENST00000453954 IGHV1-58A0A0C4DH39 117 aa12.71□□□□□ -0.37
TCF3-204ENST00000453954 GNLYP22749 145 aa12.71□□□□□ -0.37
TCF3-204ENST00000453954 DYNLRB2Q8TF09 96 aa12.71□□□□□ -0.37
TCF3-204ENST00000453954 PIK3CD-AS1Q5SR53 167 aa12.71□□□□□ -0.38
TCF3-204ENST00000453954 TMEM101Q96IK0 257 aa12.71□□□□□ -0.38
TCF3-204ENST00000453954 KLK5Q9Y337 293 aaPredicted RBP12.71□□□□□ -0.38
TCF3-204ENST00000453954 Q6ZSN1 163 aa12.7□□□□□ -0.38
TCF3-204ENST00000453954 CCL19Q99731 98 aa12.7□□□□□ -0.38
TCF3-204ENST00000453954 SVIPQ8NHG7 77 aa12.7□□□□□ -0.38
TCF3-204ENST00000453954 DCANP1Q8TF63 244 aa12.7□□□□□ -0.38
TCF3-204ENST00000453954 NF1P21359 2839 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 146.9 ms