RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 ORAOV1Q8WV07 137 aa7.76□□□□□ -1.17
PKP4-206ENST00000452162 PRSS29PA6NIE9 313 aa7.75□□□□□ -1.17
PKP4-206ENST00000452162 STHQ8IWL8 128 aa7.75□□□□□ -1.17
PKP4-206ENST00000452162 DEFB104AQ8WTQ1 72 aa7.75□□□□□ -1.17
PKP4-206ENST00000452162 A8MWV9 139 aa7.75□□□□□ -1.17
PKP4-206ENST00000452162 RPL39P62891 51 aaKnown RBP7.75□□□□□ -1.17
PKP4-206ENST00000452162 RHOHQ15669 191 aa7.75□□□□□ -1.17
PKP4-206ENST00000452162 TIMM17AQ99595 171 aa7.75□□□□□ -1.17
PKP4-206ENST00000452162 TTTY13Q9BZ97 58 aa7.75□□□□□ -1.17
PKP4-206ENST00000452162 K7EIL1 84 aa7.74□□□□□ -1.17
PKP4-206ENST00000452162 TAX1BP3O14907 124 aa7.74□□□□□ -1.17
PKP4-206ENST00000452162 HSD52Q0P140 79 aa7.74□□□□□ -1.17
PKP4-206ENST00000452162 TMEM141Q96I45 108 aa7.74□□□□□ -1.17
PKP4-206ENST00000452162 VPS25Q9BRG1 176 aa7.74□□□□□ -1.17
PKP4-206ENST00000452162 SPXQ9BT56 116 aa7.74□□□□□ -1.17
PKP4-206ENST00000452162 HIGD1BQ9P298 99 aa7.74□□□□□ -1.17
PKP4-206ENST00000452162 XCL2Q9UBD3 114 aa7.74□□□□□ -1.17
PKP4-206ENST00000452162 C1orf158Q8N1D5 194 aa7.74□□□□□ -1.17
PKP4-206ENST00000452162 P0DMU3 169 aa7.73□□□□□ -1.17
PKP4-206ENST00000452162 FAM231AP0DMU4 169 aa7.73□□□□□ -1.17
PKP4-206ENST00000452162 FAM231CP0DMU5 169 aa7.73□□□□□ -1.17
PKP4-206ENST00000452162 SEC11AP67812 179 aa7.73□□□□□ -1.17
PKP4-206ENST00000452162 CFAP126Q5VTH2 177 aa7.73□□□□□ -1.17
PKP4-206ENST00000452162 TGP01266 2768 aa7.73□□□□□ -1.17
PKP4-206ENST00000452162 IGHV3-73A0A0B4J1V6 119 aa7.73□□□□□ -1.17
PKP4-206ENST00000452162 I3L3M4 83 aa7.73□□□□□ -1.17
PKP4-206ENST00000452162 CMC4P56277 68 aaPredicted RBP7.73□□□□□ -1.17
PKP4-206ENST00000452162 IL17DQ8TAD2 202 aa7.73□□□□□ -1.17
PKP4-206ENST00000452162 NACAE9PAV3 2078 aa7.72□□□□□ -1.17
PKP4-206ENST00000452162 IGLV4-69A0A075B6H9 119 aa7.72□□□□□ -1.17
PKP4-206ENST00000452162 AZU1P20160 251 aa7.72□□□□□ -1.17
PKP4-206ENST00000452162 PMVKQ15126 192 aa7.72□□□□□ -1.17
PKP4-206ENST00000452162 Q6ZSN1 163 aa7.72□□□□□ -1.17
PKP4-206ENST00000452162 MAPKAPK5-AS1Q8N8E1 139 aa7.72□□□□□ -1.17
PKP4-206ENST00000452162 MRAPQ8TCY5 172 aa7.72□□□□□ -1.17
PKP4-206ENST00000452162 ZNF479Q96JC4 524 aa7.72□□□□□ -1.17
PKP4-206ENST00000452162 FAM110AQ9BQ89 295 aa7.72□□□□□ -1.17
PKP4-206ENST00000452162 TRBV25-1A0A075B6N4 114 aa7.71□□□□□ -1.17
PKP4-206ENST00000452162 CST9LQ9H4G1 147 aa7.71□□□□□ -1.17
PKP4-206ENST00000452162 C19orf73Q9NVV2 129 aa7.71□□□□□ -1.17
PKP4-206ENST00000452162 MRPL16Q9NX20 251 aaKnown RBP7.71□□□□□ -1.17
PKP4-206ENST00000452162 DNAH9Q9NYC9 4486 aa7.71□□□□□ -1.17
PKP4-206ENST00000452162 RHODO00212 210 aa7.71□□□□□ -1.18
PKP4-206ENST00000452162 RS1O15537 224 aa7.71□□□□□ -1.18
PKP4-206ENST00000452162 C20orf203Q8NBC4 194 aa7.71□□□□□ -1.18
PKP4-206ENST00000452162 CCL25O15444 150 aa7.7□□□□□ -1.18
PKP4-206ENST00000452162 GIG44P09565 113 aaPredicted RBP7.7□□□□□ -1.18
PKP4-206ENST00000452162 DEFB121Q5J5C9 76 aa7.7□□□□□ -1.18
PKP4-206ENST00000452162 CHAC1Q9BUX1 264 aa7.7□□□□□ -1.18
PKP4-206ENST00000452162 TRAV8-6A0A0B4J262 113 aa7.7□□□□□ -1.18
PKP4-206ENST00000452162 C11orf86A6NJI1 115 aa7.7□□□□□ -1.18
PKP4-206ENST00000452162 E9PLD3 99 aa7.7□□□□□ -1.18
PKP4-206ENST00000452162 IGHV3-53P01767 116 aa7.7□□□□□ -1.18
PKP4-206ENST00000452162 WFDC10AQ9H1F0 79 aa7.69□□□□□ -1.18
PKP4-206ENST00000452162 Q9UF83 564 aa7.69□□□□□ -1.18
PKP4-206ENST00000452162 IGHV3OR16-12A0A075B7B8 117 aa7.69□□□□□ -1.18
PKP4-206ENST00000452162 A6NDN8 102 aa7.69□□□□□ -1.18
PKP4-206ENST00000452162 PAPPA-AS1Q5QFB9 102 aa7.69□□□□□ -1.18
PKP4-206ENST00000452162 OR11H2Q8NH07 326 aa7.69□□□□□ -1.18
PKP4-206ENST00000452162 TNFRSF18Q9Y5U5 241 aa7.69□□□□□ -1.18
PKP4-206ENST00000452162 PRADC1Q9BSG0 188 aa7.68□□□□□ -1.18
PKP4-206ENST00000452162 DNAJC30Q96LL9 226 aa7.68□□□□□ -1.18
PKP4-206ENST00000452162 OPRPNQ99935 248 aaPredicted RBP7.68□□□□□ -1.18
PKP4-206ENST00000452162 COL7A1Q02388 2944 aa7.68□□□□□ -1.18
PKP4-206ENST00000452162 MYMXA0A1B0GTQ4 84 aa7.67□□□□□ -1.18
PKP4-206ENST00000452162 EMP1P54849 157 aa7.67□□□□□ -1.18
PKP4-206ENST00000452162 UBE2V1Q13404 147 aa7.67□□□□□ -1.18
PKP4-206ENST00000452162 TMEM263Q8WUH6 116 aaKnown RBP7.67□□□□□ -1.18
PKP4-206ENST00000452162 IGLV4-3A0A075B6K6 122 aa7.67□□□□□ -1.18
PKP4-206ENST00000452162 H3BRM9 83 aa7.67□□□□□ -1.18
PKP4-206ENST00000452162 NFE4Q86UQ8 179 aa7.67□□□□□ -1.18
PKP4-206ENST00000452162 ZNRF2Q8NHG8 242 aa7.67□□□□□ -1.18
PKP4-206ENST00000452162 PYGO1Q9Y3Y4 419 aa7.67□□□□□ -1.18
PKP4-206ENST00000452162 TRGV1A0A0A0MS02 117 aa7.66□□□□□ -1.18
PKP4-206ENST00000452162 FXYD2P54710 66 aa7.66□□□□□ -1.18
PKP4-206ENST00000452162 FAM104AQ969W3 186 aa7.66□□□□□ -1.18
PKP4-206ENST00000452162 TM2D2Q9BX73 214 aa7.66□□□□□ -1.18
PKP4-206ENST00000452162 RPL35AP18077 110 aaKnown RBP7.66□□□□□ -1.18
PKP4-206ENST00000452162 GCSHP23434 173 aa7.66□□□□□ -1.18
PKP4-206ENST00000452162 VAMP3Q15836 100 aa7.66□□□□□ -1.18
PKP4-206ENST00000452162 TAL2Q16559 108 aa7.66□□□□□ -1.18
PKP4-206ENST00000452162 CEND1Q8N111 149 aa7.66□□□□□ -1.18
PKP4-206ENST00000452162 CHCHD7Q9BUK0 85 aa7.66□□□□□ -1.18
PKP4-206ENST00000452162 IGHV4-30-4P0DP06 118 aa7.65□□□□□ -1.18
PKP4-206ENST00000452162 HERVK_113P61574 105 aa7.65□□□□□ -1.18
PKP4-206ENST00000452162 Q6ZTI0 123 aa7.65□□□□□ -1.18
PKP4-206ENST00000452162 CSNK1G2-AS1Q8NCQ2 148 aa7.65□□□□□ -1.18
PKP4-206ENST00000452162 OR4C5Q8NGB2 326 aa7.65□□□□□ -1.18
PKP4-206ENST00000452162 HUWE1Q7Z6Z7 4374 aaKnown RBP7.65□□□□□ -1.19
PKP4-206ENST00000452162 PLAC8L1A1L4L8 177 aa7.64□□□□□ -1.19
PKP4-206ENST00000452162 C9orf118A6NHY6 69 aa7.64□□□□□ -1.19
PKP4-206ENST00000452162 TRBV7-3A0A075B6L6 115 aa7.64□□□□□ -1.19
PKP4-206ENST00000452162 DAZ2Q13117 558 aaKnown RBP7.64□□□□□ -1.19
PKP4-206ENST00000452162 C16orf74Q96GX8 76 aa7.64□□□□□ -1.19
PKP4-206ENST00000452162 AMELXQ99217 191 aa7.64□□□□□ -1.19
PKP4-206ENST00000452162 C1QTNF4Q9BXJ3 329 aa7.64□□□□□ -1.19
PKP4-206ENST00000452162 NBEAL2Q6ZNJ1 2754 aa7.64□□□□□ -1.19
PKP4-206ENST00000452162 TRAV4A0A0B4J268 109 aa7.63□□□□□ -1.19
PKP4-206ENST00000452162 ZNF815PA8K554 130 aa7.63□□□□□ -1.19
PKP4-206ENST00000452162 TMEM170BQ5T4T1 132 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms