RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 C20orf203Q8NBC4 194 aa7.84□□□□□ -1.15
LINC00342-202ENST00000448494 MPLKIPQ8TAP9 179 aa7.84□□□□□ -1.15
LINC00342-202ENST00000448494 BPESC1Q9GZL8 116 aa7.84□□□□□ -1.15
LINC00342-202ENST00000448494 U3KQE9 123 aa7.84□□□□□ -1.15
LINC00342-202ENST00000448494 TRAV21A0A0B4J279 112 aa7.84□□□□□ -1.15
LINC00342-202ENST00000448494 PF4P02776 101 aa7.84□□□□□ -1.15
LINC00342-202ENST00000448494 ENHOQ6UWT2 76 aa7.84□□□□□ -1.15
LINC00342-202ENST00000448494 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.84□□□□□ -1.15
LINC00342-202ENST00000448494 CCL3L1P16619 93 aa7.83□□□□□ -1.16
LINC00342-202ENST00000448494 C9orf129Q5T035 196 aaKnown RBP7.83□□□□□ -1.16
LINC00342-202ENST00000448494 LY6G5BQ8NDX9 201 aa7.83□□□□□ -1.16
LINC00342-202ENST00000448494 IGHV3-72A0A0B4J1Y9 119 aa7.83□□□□□ -1.16
LINC00342-202ENST00000448494 NDPQ00604 133 aa7.83□□□□□ -1.16
LINC00342-202ENST00000448494 SPRR3Q9UBC9 169 aa7.83□□□□□ -1.16
LINC00342-202ENST00000448494 SNURFQ9Y675 71 aa7.83□□□□□ -1.16
LINC00342-202ENST00000448494 ACACBO00763 2458 aa7.82□□□□□ -1.16
LINC00342-202ENST00000448494 ASXL3Q9C0F0 2248 aa7.82□□□□□ -1.16
LINC00342-202ENST00000448494 F8W735 103 aaPredicted RBP7.82□□□□□ -1.16
LINC00342-202ENST00000448494 DEFB108BQ8NET1 73 aa7.82□□□□□ -1.16
LINC00342-202ENST00000448494 TPRP12270 2363 aaKnown RBP7.82□□□□□ -1.16
LINC00342-202ENST00000448494 ESRGQ1W209 222 aa7.82□□□□□ -1.16
LINC00342-202ENST00000448494 RNF5Q99942 180 aa7.82□□□□□ -1.16
LINC00342-202ENST00000448494 MAP1BP46821 2468 aaKnown RBP7.82□□□□□ -1.16
LINC00342-202ENST00000448494 ZFHX4Q86UP3 3567 aa7.81□□□□□ -1.16
LINC00342-202ENST00000448494 IGLV1-44P01699 117 aa7.81□□□□□ -1.16
LINC00342-202ENST00000448494 FAM229BQ4G0N7 80 aa7.81□□□□□ -1.16
LINC00342-202ENST00000448494 PRR9Q5T870 116 aa7.81□□□□□ -1.16
LINC00342-202ENST00000448494 VMO1Q7Z5L0 202 aa7.81□□□□□ -1.16
LINC00342-202ENST00000448494 WFDC9Q8NEX5 89 aa7.81□□□□□ -1.16
LINC00342-202ENST00000448494 MALRD1Q5VYJ5 2156 aa7.81□□□□□ -1.16
LINC00342-202ENST00000448494 ZNF625Q96I27 306 aaPredicted RBP7.81□□□□□ -1.16
LINC00342-202ENST00000448494 C15orf32Q32M92 178 aa7.8□□□□□ -1.16
LINC00342-202ENST00000448494 SOSTDC1Q6X4U4 206 aa7.8□□□□□ -1.16
LINC00342-202ENST00000448494 BAHCC1Q9P281 2608 aa7.8□□□□□ -1.16
LINC00342-202ENST00000448494 IGLV11-55A0A075B6I3 123 aa7.79□□□□□ -1.16
LINC00342-202ENST00000448494 H0YGX0 51 aa7.79□□□□□ -1.16
LINC00342-202ENST00000448494 SPRY3O43610 288 aa7.79□□□□□ -1.16
LINC00342-202ENST00000448494 RNASE3P12724 160 aaKnown RBP7.79□□□□□ -1.16
LINC00342-202ENST00000448494 MIFP14174 115 aa7.79□□□□□ -1.16
LINC00342-202ENST00000448494 DEFB104AQ8WTQ1 72 aa7.79□□□□□ -1.16
LINC00342-202ENST00000448494 TTTY12Q9BZ98 90 aa7.79□□□□□ -1.16
LINC00342-202ENST00000448494 USP24Q9UPU5 2620 aa7.79□□□□□ -1.16
LINC00342-202ENST00000448494 CD28P10747 220 aa7.79□□□□□ -1.16
LINC00342-202ENST00000448494 DAD1P61803 113 aa7.79□□□□□ -1.16
LINC00342-202ENST00000448494 Q0VFX4 171 aa7.79□□□□□ -1.16
LINC00342-202ENST00000448494 PIK3CD-AS1Q5SR53 167 aa7.79□□□□□ -1.16
LINC00342-202ENST00000448494 SPINK14Q6IE38 97 aa7.79□□□□□ -1.16
LINC00342-202ENST00000448494 UBL5Q9BZL1 73 aa7.79□□□□□ -1.16
LINC00342-202ENST00000448494 S4R3C0 116 aa7.79□□□□□ -1.16
LINC00342-202ENST00000448494 RPL11P62913 178 aaKnown RBP7.78□□□□□ -1.16
LINC00342-202ENST00000448494 F5P12259 2224 aa7.78□□□□□ -1.16
LINC00342-202ENST00000448494 F5H697 171 aa7.78□□□□□ -1.16
LINC00342-202ENST00000448494 NCR3O14931 201 aa7.78□□□□□ -1.16
LINC00342-202ENST00000448494 HOXD3P31249 432 aaPredicted RBP7.78□□□□□ -1.16
LINC00342-202ENST00000448494 ZFAND2AQ8N6M9 145 aa7.78□□□□□ -1.16
LINC00342-202ENST00000448494 GPR179Q6PRD1 2367 aa7.78□□□□□ -1.16
LINC00342-202ENST00000448494 CTSGP08311 255 aa7.77□□□□□ -1.17
LINC00342-202ENST00000448494 CCDC140Q96MF4 163 aa7.77□□□□□ -1.17
LINC00342-202ENST00000448494 IGHV1-3A0A0C4DH29 117 aa7.77□□□□□ -1.17
LINC00342-202ENST00000448494 JMJD7-PLA2G4BH0Y9G9 81 aa7.77□□□□□ -1.17
LINC00342-202ENST00000448494 NDUFB3O43676 98 aa7.77□□□□□ -1.17
LINC00342-202ENST00000448494 C6orf223Q8N319 242 aa7.77□□□□□ -1.17
LINC00342-202ENST00000448494 TM2D3Q9BRN9 247 aa7.77□□□□□ -1.17
LINC00342-202ENST00000448494 A0A087WYN8 130 aa7.76□□□□□ -1.17
LINC00342-202ENST00000448494 TRBV7-4A0A0J9YYF1 115 aa7.76□□□□□ -1.17
LINC00342-202ENST00000448494 DYNLRB2Q8TF09 96 aa7.76□□□□□ -1.17
LINC00342-202ENST00000448494 ABCA1O95477 2261 aa7.76□□□□□ -1.17
LINC00342-202ENST00000448494 CHD6Q8TD26 2715 aa7.76□□□□□ -1.17
LINC00342-202ENST00000448494 CACNA1GO43497 2377 aa7.76□□□□□ -1.17
LINC00342-202ENST00000448494 ERC2-IT1O76042 136 aa7.76□□□□□ -1.17
LINC00342-202ENST00000448494 ADORA2A-AS1P86434 159 aa7.76□□□□□ -1.17
LINC00342-202ENST00000448494 DEFB119Q8N690 84 aa7.76□□□□□ -1.17
LINC00342-202ENST00000448494 CLPSL1A2RUU4 121 aa7.75□□□□□ -1.17
LINC00342-202ENST00000448494 MIR7-3HGQ8N6C7 128 aa7.75□□□□□ -1.17
LINC00342-202ENST00000448494 FAM104AQ969W3 186 aa7.75□□□□□ -1.17
LINC00342-202ENST00000448494 SPTBN2O15020 2390 aa7.75□□□□□ -1.17
LINC00342-202ENST00000448494 FRYLO94915 3013 aa7.75□□□□□ -1.17
LINC00342-202ENST00000448494 M0QY20 66 aa7.75□□□□□ -1.17
LINC00342-202ENST00000448494 Q1T7F1 81 aa7.75□□□□□ -1.17
LINC00342-202ENST00000448494 ORMDL1Q9P0S3 153 aa7.75□□□□□ -1.17
LINC00342-202ENST00000448494 Q9UF83 564 aa7.75□□□□□ -1.17
LINC00342-202ENST00000448494 COL27A1Q8IZC6 1860 aaPredicted RBP7.75□□□□□ -1.17
LINC00342-202ENST00000448494 WDR87Q6ZQQ6 2873 aa7.74□□□□□ -1.17
LINC00342-202ENST00000448494 GNRH2O43555 120 aa7.74□□□□□ -1.17
LINC00342-202ENST00000448494 CRPP02741 224 aa7.74□□□□□ -1.17
LINC00342-202ENST00000448494 IGHV1-8P0DP01 117 aa7.74□□□□□ -1.17
LINC00342-202ENST00000448494 RBM12B-AS1Q9P1G2 102 aa7.74□□□□□ -1.17
LINC00342-202ENST00000448494 CFAP47Q6ZTR5 3102 aa7.74□□□□□ -1.17
LINC00342-202ENST00000448494 IGLV3-9A0A075B6K5 115 aa7.74□□□□□ -1.17
LINC00342-202ENST00000448494 F6UB75 175 aa7.74□□□□□ -1.17
LINC00342-202ENST00000448494 IGLV5-45A0A087WSX0 123 aa7.73□□□□□ -1.17
LINC00342-202ENST00000448494 KTN1-AS1Q86SY8 53 aa7.73□□□□□ -1.17
LINC00342-202ENST00000448494 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.73□□□□□ -1.17
LINC00342-202ENST00000448494 Q9H8V8 135 aa7.73□□□□□ -1.17
LINC00342-202ENST00000448494 A0A087WWL8 130 aa7.73□□□□□ -1.17
LINC00342-202ENST00000448494 TRAV10A0A0B4J240 114 aa7.73□□□□□ -1.17
LINC00342-202ENST00000448494 IGF1P05019 195 aa7.73□□□□□ -1.17
LINC00342-202ENST00000448494 LPAL2Q16609 132 aa7.73□□□□□ -1.17
LINC00342-202ENST00000448494 C11orf68Q9H3H3 251 aaKnown RBP7.73□□□□□ -1.17
LINC00342-202ENST00000448494 IGHV1-46P01743 117 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms