RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 FAM231CP0DMU5 169 aa12.41□□□□□ -0.42
TCOF1-206ENST00000445265 NOTCH2Q04721 2471 aa12.41□□□□□ -0.42
TCOF1-206ENST00000445265 F5H768 121 aa12.41□□□□□ -0.42
TCOF1-206ENST00000445265 CRIP2P52943 208 aaPredicted RBP12.41□□□□□ -0.42
TCOF1-206ENST00000445265 UFSP1Q6NVU6 142 aa12.41□□□□□ -0.42
TCOF1-206ENST00000445265 PCSK5Q92824 1860 aa12.41□□□□□ -0.42
TCOF1-206ENST00000445265 Q6YL49 198 aa12.4□□□□□ -0.42
TCOF1-206ENST00000445265 Q6ZQT7 251 aa12.4□□□□□ -0.42
TCOF1-206ENST00000445265 SND1-IT1Q9HBX3 110 aa12.4□□□□□ -0.42
TCOF1-206ENST00000445265 PRRC2CQ9Y520 2896 aaKnown RBP12.4□□□□□ -0.42
TCOF1-206ENST00000445265 C9orf153Q5TBE3 101 aa12.4□□□□□ -0.43
TCOF1-206ENST00000445265 C5orf38Q86SI9 138 aa12.4□□□□□ -0.43
TCOF1-206ENST00000445265 NFE4Q86UQ8 179 aa12.4□□□□□ -0.43
TCOF1-206ENST00000445265 COX7B2Q8TF08 81 aa12.39□□□□□ -0.43
TCOF1-206ENST00000445265 TMEM263Q8WUH6 116 aaKnown RBP12.39□□□□□ -0.43
TCOF1-206ENST00000445265 EDA2RQ9HAV5 297 aa12.39□□□□□ -0.43
TCOF1-206ENST00000445265 H0YGX0 51 aa12.39□□□□□ -0.43
TCOF1-206ENST00000445265 APOC4P55056 127 aa12.39□□□□□ -0.43
TCOF1-206ENST00000445265 PYGO1Q9Y3Y4 419 aa12.39□□□□□ -0.43
TCOF1-206ENST00000445265 XCL1P47992 114 aa12.39□□□□□ -0.43
TCOF1-206ENST00000445265 DCANP1Q8TF63 244 aa12.39□□□□□ -0.43
TCOF1-206ENST00000445265 C9orf85Q96MD7 179 aa12.39□□□□□ -0.43
TCOF1-206ENST00000445265 ANGP03950 147 aaKnown RBP12.38□□□□□ -0.43
TCOF1-206ENST00000445265 C10orf99Q6UWK7 81 aa12.37□□□□□ -0.43
TCOF1-206ENST00000445265 CLEC2BQ92478 149 aa12.37□□□□□ -0.43
TCOF1-206ENST00000445265 CRYGDP07320 174 aa12.36□□□□□ -0.43
TCOF1-206ENST00000445265 CCDC168Q8NDH2 2452 aa12.36□□□□□ -0.43
TCOF1-206ENST00000445265 TRAV4A0A0B4J268 109 aa12.36□□□□□ -0.43
TCOF1-206ENST00000445265 IGHV3-30P01768 117 aa12.36□□□□□ -0.43
TCOF1-206ENST00000445265 IGHV3-30-5P0DP03 117 aa12.36□□□□□ -0.43
TCOF1-206ENST00000445265 TSHBP01222 138 aa12.36□□□□□ -0.43
TCOF1-206ENST00000445265 HIVEP3Q5T1R4 2406 aa12.36□□□□□ -0.43
TCOF1-206ENST00000445265 IGLV2-18A0A075B6J9 118 aa12.36□□□□□ -0.43
TCOF1-206ENST00000445265 IGHV3-33P01772 117 aa12.36□□□□□ -0.43
TCOF1-206ENST00000445265 PRB1P04280 392 aa12.36□□□□□ -0.43
TCOF1-206ENST00000445265 Q6ZS46 218 aa12.35□□□□□ -0.43
TCOF1-206ENST00000445265 LINC00467Q9BRT7 94 aa12.35□□□□□ -0.43
TCOF1-206ENST00000445265 A0A096LPF7 62 aa12.35□□□□□ -0.43
TCOF1-206ENST00000445265 IGIPA6NJ69 53 aa12.35□□□□□ -0.43
TCOF1-206ENST00000445265 BRI3O95415 125 aa12.35□□□□□ -0.43
TCOF1-206ENST00000445265 DEFB114Q30KQ6 69 aa12.35□□□□□ -0.43
TCOF1-206ENST00000445265 CDKN2A-AS1Q9UH64 79 aa12.35□□□□□ -0.43
TCOF1-206ENST00000445265 CLPSL2Q6UWE3 100 aa12.35□□□□□ -0.43
TCOF1-206ENST00000445265 UBL5Q9BZL1 73 aa12.34□□□□□ -0.43
TCOF1-206ENST00000445265 GYPEP15421 78 aa12.34□□□□□ -0.43
TCOF1-206ENST00000445265 A0A1W2PPR1 153 aa12.34□□□□□ -0.43
TCOF1-206ENST00000445265 HIVEP2P31629 2446 aa12.33□□□□□ -0.43
TCOF1-206ENST00000445265 CFAP126Q5VTH2 177 aa12.33□□□□□ -0.44
TCOF1-206ENST00000445265 ZNF561-AS1K7EIQ3 104 aa12.33□□□□□ -0.44
TCOF1-206ENST00000445265 IGHV4-31P0DP07 118 aa12.33□□□□□ -0.44
TCOF1-206ENST00000445265 ORMDL1Q9P0S3 153 aa12.33□□□□□ -0.44
TCOF1-206ENST00000445265 B5MCH6 92 aa12.32□□□□□ -0.44
TCOF1-206ENST00000445265 TRBV30A0A0K0K1B3 111 aa12.32□□□□□ -0.44
TCOF1-206ENST00000445265 TIRAPP58753 221 aa12.32□□□□□ -0.44
TCOF1-206ENST00000445265 CRLF1O75462 422 aa12.31□□□□□ -0.44
TCOF1-206ENST00000445265 Q6ZTI0 123 aa12.31□□□□□ -0.44
TCOF1-206ENST00000445265 LRRC75A-AS1Q8N1F1 130 aa12.31□□□□□ -0.44
TCOF1-206ENST00000445265 CITED2Q99967 270 aaPredicted RBP12.31□□□□□ -0.44
TCOF1-206ENST00000445265 MIR7-3HGQ8N6C7 128 aa12.3□□□□□ -0.44
TCOF1-206ENST00000445265 PROK1P58294 105 aa12.3□□□□□ -0.44
TCOF1-206ENST00000445265 MT-ATP8P03928 68 aa12.29□□□□□ -0.44
TCOF1-206ENST00000445265 ZNF702PQ9H963 129 aa12.29□□□□□ -0.44
TCOF1-206ENST00000445265 TRIAP1O43715 76 aa12.28□□□□□ -0.44
TCOF1-206ENST00000445265 USP9XQ93008 2570 aaPredicted RBP12.28□□□□□ -0.44
TCOF1-206ENST00000445265 DNAJC9-AS1A6NH13 148 aa12.28□□□□□ -0.44
TCOF1-206ENST00000445265 COX7A2LO14548 114 aa12.28□□□□□ -0.44
TCOF1-206ENST00000445265 RS1O15537 224 aa12.28□□□□□ -0.44
TCOF1-206ENST00000445265 PIK3CD-AS1Q5SR53 167 aa12.28□□□□□ -0.44
TCOF1-206ENST00000445265 J3QKU1 62 aa12.28□□□□□ -0.44
TCOF1-206ENST00000445265 NDUFA1O15239 70 aa12.28□□□□□ -0.44
TCOF1-206ENST00000445265 HIST2H2BCQ6DN03 193 aa12.28□□□□□ -0.44
TCOF1-206ENST00000445265 LINC01546A6NGU7 62 aa12.27□□□□□ -0.44
TCOF1-206ENST00000445265 TIMM17BO60830 172 aa12.27□□□□□ -0.44
TCOF1-206ENST00000445265 SPATA25Q9BR10 227 aa12.27□□□□□ -0.44
TCOF1-206ENST00000445265 UBE2D1P51668 147 aa12.27□□□□□ -0.44
TCOF1-206ENST00000445265 USP9YO00507 2555 aaPredicted RBP12.27□□□□□ -0.45
TCOF1-206ENST00000445265 TRANK1O15050 2925 aa12.27□□□□□ -0.45
TCOF1-206ENST00000445265 TEX49A0A1B0GTD5 131 aa12.26□□□□□ -0.45
TCOF1-206ENST00000445265 AVPP01185 164 aa12.26□□□□□ -0.45
TCOF1-206ENST00000445265 LINC00308Q8TCZ7 52 aa12.26□□□□□ -0.45
TCOF1-206ENST00000445265 SPANXCQ9NY87 97 aa12.26□□□□□ -0.45
TCOF1-206ENST00000445265 IGLV4-69A0A075B6H9 119 aa12.26□□□□□ -0.45
TCOF1-206ENST00000445265 C9orf66Q5T8R8 295 aa12.26□□□□□ -0.45
TCOF1-206ENST00000445265 ZNF580Q9UK33 172 aa12.26□□□□□ -0.45
TCOF1-206ENST00000445265 HIST2H2BDQ6DRA6 164 aa12.25□□□□□ -0.45
TCOF1-206ENST00000445265 MRPS36P82909 103 aaKnown RBP12.25□□□□□ -0.45
TCOF1-206ENST00000445265 SONP18583 2426 aaKnown RBP12.25□□□□□ -0.45
TCOF1-206ENST00000445265 PTPRBP23467 1997 aa12.25□□□□□ -0.45
TCOF1-206ENST00000445265 H7C423 109 aa12.24□□□□□ -0.45
TCOF1-206ENST00000445265 MRPL23Q16540 153 aaKnown RBP12.24□□□□□ -0.45
TCOF1-206ENST00000445265 DSCR8Q96T75 97 aa12.24□□□□□ -0.45
TCOF1-206ENST00000445265 TRAV26-1A0A087WT03 109 aa12.24□□□□□ -0.45
TCOF1-206ENST00000445265 ATP5G1P05496 136 aa12.24□□□□□ -0.45
TCOF1-206ENST00000445265 UBE2D4Q9Y2X8 147 aa12.24□□□□□ -0.45
TCOF1-206ENST00000445265 CXCL5P42830 114 aa12.23□□□□□ -0.45
TCOF1-206ENST00000445265 DPH3Q96FX2 82 aa12.23□□□□□ -0.45
TCOF1-206ENST00000445265 CITED1Q99966 193 aa12.23□□□□□ -0.45
TCOF1-206ENST00000445265 LECT2O14960 151 aa12.23□□□□□ -0.45
TCOF1-206ENST00000445265 HAMPP81172 84 aa12.23□□□□□ -0.45
TCOF1-206ENST00000445265 FAM236AA0A1B0GUQ0 79 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 151.3 ms