RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 PCP2Q8IVA1 136 aa11.25□□□□□ -0.61
SNX13-204ENST00000444712 DEFB104AQ8WTQ1 72 aa11.25□□□□□ -0.61
SNX13-204ENST00000444712 TRGV2A0A075B6R0 118 aa11.24□□□□□ -0.61
SNX13-204ENST00000444712 IGKV2D-26A0A0A0MRZ7 120 aa11.24□□□□□ -0.61
SNX13-204ENST00000444712 WIPF1O43516 503 aa11.24□□□□□ -0.61
SNX13-204ENST00000444712 KIR2DL5BQ8NHK3 375 aa11.24□□□□□ -0.61
SNX13-204ENST00000444712 SPANXA1Q9NS26 97 aa11.24□□□□□ -0.61
SNX13-204ENST00000444712 HSD52Q0P140 79 aa11.23□□□□□ -0.61
SNX13-204ENST00000444712 BVES-AS1Q5T3Y7 98 aa11.23□□□□□ -0.61
SNX13-204ENST00000444712 OR11H2Q8NH07 326 aa11.23□□□□□ -0.61
SNX13-204ENST00000444712 IGLV4-69A0A075B6H9 119 aa11.23□□□□□ -0.61
SNX13-204ENST00000444712 E9PLD3 99 aa11.23□□□□□ -0.61
SNX13-204ENST00000444712 APOC4P55056 127 aa11.23□□□□□ -0.61
SNX13-204ENST00000444712 DAZ4Q86SG3 579 aaKnown RBP11.22□□□□□ -0.61
SNX13-204ENST00000444712 VCX2Q9H322 139 aa11.22□□□□□ -0.61
SNX13-204ENST00000444712 DAZ3Q9NR90 486 aaKnown RBP11.22□□□□□ -0.61
SNX13-204ENST00000444712 IGLV4-3A0A075B6K6 122 aa11.21□□□□□ -0.61
SNX13-204ENST00000444712 GAGE12BA1L429 117 aa11.21□□□□□ -0.61
SNX13-204ENST00000444712 GAGE7O76087 117 aa11.21□□□□□ -0.61
SNX13-204ENST00000444712 GAGE12FP0CL80 117 aa11.21□□□□□ -0.61
SNX13-204ENST00000444712 GAGE12GP0CL81 117 aa11.21□□□□□ -0.61
SNX13-204ENST00000444712 GAGE12IP0CL82 117 aa11.21□□□□□ -0.61
SNX13-204ENST00000444712 NFE4Q86UQ8 179 aa11.21□□□□□ -0.61
SNX13-204ENST00000444712 ZNRF2Q8NHG8 242 aa11.21□□□□□ -0.61
SNX13-204ENST00000444712 CHCHD7Q9BUK0 85 aa11.21□□□□□ -0.61
SNX13-204ENST00000444712 TRBV6-4A0A1B0GX49 114 aa11.21□□□□□ -0.62
SNX13-204ENST00000444712 C11orf86A6NJI1 115 aa11.21□□□□□ -0.62
SNX13-204ENST00000444712 SEC11AP67812 179 aa11.21□□□□□ -0.62
SNX13-204ENST00000444712 SMAGPQ0VAQ4 97 aa11.21□□□□□ -0.62
SNX13-204ENST00000444712 SPATA3Q8NHX4 192 aa11.2□□□□□ -0.62
SNX13-204ENST00000444712 SLC25A29Q8N8R3 303 aa11.19□□□□□ -0.62
SNX13-204ENST00000444712 PHLDA1Q8WV24 401 aaPredicted RBP11.19□□□□□ -0.62
SNX13-204ENST00000444712 TIMM21Q9BVV7 248 aa11.19□□□□□ -0.62
SNX13-204ENST00000444712 Q9UF83 564 aa11.19□□□□□ -0.62
SNX13-204ENST00000444712 TRAV8-6A0A0B4J262 113 aa11.19□□□□□ -0.62
SNX13-204ENST00000444712 AMELXQ99217 191 aa11.19□□□□□ -0.62
SNX13-204ENST00000444712 TRBV25-1A0A075B6N4 114 aa11.18□□□□□ -0.62
SNX13-204ENST00000444712 TRGV4A0A0C4DH28 118 aa11.18□□□□□ -0.62
SNX13-204ENST00000444712 UBE2D3P61077 147 aa11.18□□□□□ -0.62
SNX13-204ENST00000444712 UBE2D2P62837 147 aa11.18□□□□□ -0.62
SNX13-204ENST00000444712 UBE2D4Q9Y2X8 147 aa11.18□□□□□ -0.62
SNX13-204ENST00000444712 IGHV3-38A0A0C4DH36 116 aa11.18□□□□□ -0.62
SNX13-204ENST00000444712 PRADC1Q9BSG0 188 aa11.18□□□□□ -0.62
SNX13-204ENST00000444712 CHAC1Q9BUX1 264 aa11.18□□□□□ -0.62
SNX13-204ENST00000444712 MYMXA0A1B0GTQ4 84 aa11.17□□□□□ -0.62
SNX13-204ENST00000444712 A6NDN8 102 aa11.17□□□□□ -0.62
SNX13-204ENST00000444712 TMEM170BQ5T4T1 132 aa11.17□□□□□ -0.62
SNX13-204ENST00000444712 LINC00612Q8N6U2 182 aa11.17□□□□□ -0.62
SNX13-204ENST00000444712 ORAOV1Q8WV07 137 aa11.17□□□□□ -0.62
SNX13-204ENST00000444712 MRPS36P82909 103 aaKnown RBP11.16□□□□□ -0.62
SNX13-204ENST00000444712 TAL2Q16559 108 aa11.16□□□□□ -0.62
SNX13-204ENST00000444712 OPRPNQ99935 248 aaPredicted RBP11.16□□□□□ -0.62
SNX13-204ENST00000444712 GTSF1LQ9H1H1 148 aa11.16□□□□□ -0.62
SNX13-204ENST00000444712 X6R8D5 127 aa11.16□□□□□ -0.62
SNX13-204ENST00000444712 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.15□□□□□ -0.62
SNX13-204ENST00000444712 IGKV2-29A2NJV5 120 aaPredicted RBP11.15□□□□□ -0.62
SNX13-204ENST00000444712 EMP1P54849 157 aa11.15□□□□□ -0.62
SNX13-204ENST00000444712 KRTAP24-1Q3LI83 254 aa11.15□□□□□ -0.62
SNX13-204ENST00000444712 TTTY13Q9BZ97 58 aa11.15□□□□□ -0.62
SNX13-204ENST00000444712 ZMAT5Q9UDW3 170 aaKnown RBP11.15□□□□□ -0.62
SNX13-204ENST00000444712 GAGE12JA6NER3 117 aa11.14□□□□□ -0.63
SNX13-204ENST00000444712 LYRM9A8MSI8 78 aa11.14□□□□□ -0.63
SNX13-204ENST00000444712 ZNF25P17030 456 aaPredicted RBP11.14□□□□□ -0.63
SNX13-204ENST00000444712 GAGE1Q13065 139 aa11.14□□□□□ -0.63
SNX13-204ENST00000444712 GAGE4Q13068 117 aa11.14□□□□□ -0.63
SNX13-204ENST00000444712 GAGE5Q13069 117 aa11.14□□□□□ -0.63
SNX13-204ENST00000444712 GAGE13Q4V321 117 aa11.14□□□□□ -0.63
SNX13-204ENST00000444712 DGAT2L7PQ6IED9 249 aa11.14□□□□□ -0.63
SNX13-204ENST00000444712 MAPKAPK5-AS1Q8N8E1 139 aa11.14□□□□□ -0.63
SNX13-204ENST00000444712 F8P00451 2351 aa11.14□□□□□ -0.63
SNX13-204ENST00000444712 JMJD1CQ15652 2540 aa11.14□□□□□ -0.63
SNX13-204ENST00000444712 CSDC2Q9Y534 153 aaKnown RBP11.14□□□□□ -0.63
SNX13-204ENST00000444712 COX11Q9Y6N1 276 aa11.14□□□□□ -0.63
SNX13-204ENST00000444712 FHL2Q14192 279 aa11.13□□□□□ -0.63
SNX13-204ENST00000444712 SHISA2Q6UWI4 295 aa11.13□□□□□ -0.63
SNX13-204ENST00000444712 ZNF815PA8K554 130 aa11.13□□□□□ -0.63
SNX13-204ENST00000444712 H7C423 109 aa11.13□□□□□ -0.63
SNX13-204ENST00000444712 C3orf56Q8N813 242 aa11.13□□□□□ -0.63
SNX13-204ENST00000444712 TMEM223A0PJW6 202 aa11.12□□□□□ -0.63
SNX13-204ENST00000444712 ZNF22P17026 224 aaPredicted RBP11.12□□□□□ -0.63
SNX13-204ENST00000444712 FAM104AQ969W3 186 aa11.12□□□□□ -0.63
SNX13-204ENST00000444712 A0A0J9YXV3 536 aa11.11□□□□□ -0.63
SNX13-204ENST00000444712 TINCRA0A1B0GVN0 87 aa11.11□□□□□ -0.63
SNX13-204ENST00000444712 DEFB135Q30KP9 77 aa11.11□□□□□ -0.63
SNX13-204ENST00000444712 LEPROTO15243 131 aa11.11□□□□□ -0.63
SNX13-204ENST00000444712 DEFB130BP0DP73 79 aa11.11□□□□□ -0.63
SNX13-204ENST00000444712 DEFB130AP0DP74 79 aa11.11□□□□□ -0.63
SNX13-204ENST00000444712 MIFP14174 115 aa11.11□□□□□ -0.63
SNX13-204ENST00000444712 CEMP1Q6PRD7 247 aaPredicted RBP11.11□□□□□ -0.63
SNX13-204ENST00000444712 Q6ZUT4 128 aa11.11□□□□□ -0.63
SNX13-204ENST00000444712 TAX1BP3O14907 124 aa11.1□□□□□ -0.63
SNX13-204ENST00000444712 UBE2L6O14933 153 aa11.1□□□□□ -0.63
SNX13-204ENST00000444712 LGALS3P17931 250 aaKnown RBP11.1□□□□□ -0.63
SNX13-204ENST00000444712 SBSPONQ8IVN8 264 aa11.1□□□□□ -0.63
SNX13-204ENST00000444712 CEND1Q8N111 149 aa11.1□□□□□ -0.63
SNX13-204ENST00000444712 PLEKHB2Q96CS7 222 aa11.1□□□□□ -0.63
SNX13-204ENST00000444712 TMEM243Q9BU79 118 aa11.1□□□□□ -0.63
SNX13-204ENST00000444712 TEP1Q99973 2627 aaKnown RBP11.1□□□□□ -0.63
SNX13-204ENST00000444712 GCSHP23434 173 aa11.09□□□□□ -0.63
SNX13-204ENST00000444712 SCGB1D4Q6XE38 83 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms