RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 CGB7P0DN87 165 aa3.86□□□□□ -1.79
SCN11A-202ENST00000444237 RPL28P46779 137 aaKnown RBP3.86□□□□□ -1.79
SCN11A-202ENST00000444237 ZNF672Q499Z4 452 aaPredicted RBP3.86□□□□□ -1.79
SCN11A-202ENST00000444237 COX8CQ7Z4L0 72 aa3.86□□□□□ -1.79
SCN11A-202ENST00000444237 RMI2Q96E14 147 aa3.86□□□□□ -1.79
SCN11A-202ENST00000444237 RITA1Q96K30 269 aa3.86□□□□□ -1.79
SCN11A-202ENST00000444237 TECTAO75443 2155 aa3.85□□□□□ -1.79
SCN11A-202ENST00000444237 POLR2KP53803 58 aaKnown RBP3.85□□□□□ -1.79
SCN11A-202ENST00000444237 AHCTF1Q8WYP5 2266 aa3.85□□□□□ -1.79
SCN11A-202ENST00000444237 IBA57-AS1B1ANH7 110 aa3.85□□□□□ -1.79
SCN11A-202ENST00000444237 DIRC1Q969H9 104 aa3.85□□□□□ -1.79
SCN11A-202ENST00000444237 ATG2AQ2TAZ0 1938 aa3.85□□□□□ -1.79
SCN11A-202ENST00000444237 IGHV3OR16-10A0A075B7F0 116 aa3.85□□□□□ -1.79
SCN11A-202ENST00000444237 LYNX1G3V0Z9 82 aa3.85□□□□□ -1.79
SCN11A-202ENST00000444237 H3BUA1 57 aa3.85□□□□□ -1.79
SCN11A-202ENST00000444237 LYNX1P0DP58 116 aa3.85□□□□□ -1.79
SCN11A-202ENST00000444237 CFHR3Q02985 330 aa3.85□□□□□ -1.79
SCN11A-202ENST00000444237 TMEM254Q8TBM7 123 aa3.85□□□□□ -1.79
SCN11A-202ENST00000444237 DOCK7Q96N67 2140 aa3.85□□□□□ -1.79
SCN11A-202ENST00000444237 LINC00846Q9NV44 126 aa3.85□□□□□ -1.79
SCN11A-202ENST00000444237 NCOA6Q14686 2063 aaPredicted RBP3.85□□□□□ -1.79
SCN11A-202ENST00000444237 ZGRF1Q86YA3 2104 aa3.84□□□□□ -1.79
SCN11A-202ENST00000444237 DEFB131AP59861 70 aa3.84□□□□□ -1.79
SCN11A-202ENST00000444237 DAZAP2Q15038 168 aaPredicted RBP3.84□□□□□ -1.79
SCN11A-202ENST00000444237 SCXQ7RTU7 201 aa3.84□□□□□ -1.79
SCN11A-202ENST00000444237 ZNF407Q9C0G0 2248 aa3.84□□□□□ -1.79
SCN11A-202ENST00000444237 CEP250Q9BV73 2442 aa3.84□□□□□ -1.79
SCN11A-202ENST00000444237 TRBV10-1A0A0K0K1A3 114 aa3.84□□□□□ -1.79
SCN11A-202ENST00000444237 TMEM89A2RUT3 159 aa3.84□□□□□ -1.79
SCN11A-202ENST00000444237 G3V318 75 aa3.84□□□□□ -1.79
SCN11A-202ENST00000444237 SAA4P35542 130 aa3.84□□□□□ -1.79
SCN11A-202ENST00000444237 DCANP1Q8TF63 244 aa3.84□□□□□ -1.79
SCN11A-202ENST00000444237 FER1L5A0AVI2 2057 aa3.84□□□□□ -1.79
SCN11A-202ENST00000444237 NKAPP1Q8N9T2 125 aa3.84□□□□□ -1.79
SCN11A-202ENST00000444237 PSPHP1O15172 72 aa3.84□□□□□ -1.8
SCN11A-202ENST00000444237 POM121L12Q8N7R1 296 aa3.84□□□□□ -1.8
SCN11A-202ENST00000444237 SMIM11BQ8TCY0 68 aa3.84□□□□□ -1.8
SCN11A-202ENST00000444237 MAP1BP46821 2468 aaKnown RBP3.84□□□□□ -1.8
SCN11A-202ENST00000444237 TMEM131Q92545 1883 aa3.83□□□□□ -1.8
SCN11A-202ENST00000444237 M0QY20 66 aa3.83□□□□□ -1.8
SCN11A-202ENST00000444237 UBE2E2Q96LR5 201 aa3.83□□□□□ -1.8
SCN11A-202ENST00000444237 PSMG3-AS1Q96PY0 264 aa3.83□□□□□ -1.8
SCN11A-202ENST00000444237 PRR15LQ9BU68 103 aa3.83□□□□□ -1.8
SCN11A-202ENST00000444237 WNK2Q9Y3S1 2297 aa3.83□□□□□ -1.8
SCN11A-202ENST00000444237 LINC01548A6NM66 108 aa3.83□□□□□ -1.8
SCN11A-202ENST00000444237 K7EQD1 137 aa3.83□□□□□ -1.8
SCN11A-202ENST00000444237 Q8N6K4 173 aa3.83□□□□□ -1.8
SCN11A-202ENST00000444237 SRCAPQ6ZRS2 3230 aa3.83□□□□□ -1.8
SCN11A-202ENST00000444237 IGHV4-28A0A0C4DH34 117 aa3.83□□□□□ -1.8
SCN11A-202ENST00000444237 Q8N3U1 123 aa3.83□□□□□ -1.8
SCN11A-202ENST00000444237 TSHBP01222 138 aa3.83□□□□□ -1.8
SCN11A-202ENST00000444237 C1orf229Q6ZS94 237 aaPredicted RBP3.83□□□□□ -1.8
SCN11A-202ENST00000444237 FAM19A1Q7Z5A9 133 aa3.83□□□□□ -1.8
SCN11A-202ENST00000444237 ABCA1O95477 2261 aa3.82□□□□□ -1.8
SCN11A-202ENST00000444237 A0A1W2PNU3 283 aaPredicted RBP3.82□□□□□ -1.8
SCN11A-202ENST00000444237 COX7BP24311 80 aa3.82□□□□□ -1.8
SCN11A-202ENST00000444237 SERTAD4-AS1Q5TG53 156 aa3.82□□□□□ -1.8
SCN11A-202ENST00000444237 UBE2D4Q9Y2X8 147 aa3.82□□□□□ -1.8
SCN11A-202ENST00000444237 AGRNO00468 2067 aa3.82□□□□□ -1.8
SCN11A-202ENST00000444237 NCKAP5O14513 1909 aa3.82□□□□□ -1.8
SCN11A-202ENST00000444237 LINC01561Q8N1V8 128 aa3.82□□□□□ -1.8
SCN11A-202ENST00000444237 PLCE1Q9P212 2302 aa3.82□□□□□ -1.8
SCN11A-202ENST00000444237 FHL2Q14192 279 aa3.82□□□□□ -1.8
SCN11A-202ENST00000444237 C4orf48Q5BLP8 95 aa3.82□□□□□ -1.8
SCN11A-202ENST00000444237 EXPH5Q8NEV8 1989 aa3.82□□□□□ -1.8
SCN11A-202ENST00000444237 HILS1P60008 231 aa3.82□□□□□ -1.8
SCN11A-202ENST00000444237 CXCL6P80162 114 aa3.82□□□□□ -1.8
SCN11A-202ENST00000444237 CASC2Q6XLA1 102 aa3.82□□□□□ -1.8
SCN11A-202ENST00000444237 MUC22E2RYF6 1773 aaPredicted RBP3.82□□□□□ -1.8
SCN11A-202ENST00000444237 IGHV7-81A0A0B4J1V7 117 aa3.81□□□□□ -1.8
SCN11A-202ENST00000444237 NTM-AS1Q6ZSK4 140 aa3.81□□□□□ -1.8
SCN11A-202ENST00000444237 LIMD2Q9BT23 127 aa3.81□□□□□ -1.8
SCN11A-202ENST00000444237 DKK4Q9UBT3 224 aa3.81□□□□□ -1.8
SCN11A-202ENST00000444237 CEP192Q8TEP8 1941 aa3.81□□□□□ -1.8
SCN11A-202ENST00000444237 EML5Q05BV3 1969 aa3.81□□□□□ -1.8
SCN11A-202ENST00000444237 IGLV1-47P01700 117 aa3.81□□□□□ -1.8
SCN11A-202ENST00000444237 C11orf21Q9P2W6 132 aa3.81□□□□□ -1.8
SCN11A-202ENST00000444237 CTSZQ9UBR2 303 aa3.81□□□□□ -1.8
SCN11A-202ENST00000444237 ADAMTSL4-AS1Q5T5F5 129 aa3.81□□□□□ -1.8
SCN11A-202ENST00000444237 APRG1Q8IVJ8 170 aa3.81□□□□□ -1.8
SCN11A-202ENST00000444237 ZFAND2AQ8N6M9 145 aa3.81□□□□□ -1.8
SCN11A-202ENST00000444237 LINC00467Q9BRT7 94 aa3.81□□□□□ -1.8
SCN11A-202ENST00000444237 ZFAND3Q9H8U3 227 aa3.81□□□□□ -1.8
SCN11A-202ENST00000444237 CACNA1GO43497 2377 aa3.81□□□□□ -1.8
SCN11A-202ENST00000444237 LRCOL1A6NCL2 159 aa3.81□□□□□ -1.8
SCN11A-202ENST00000444237 IGFL3Q6UXB1 125 aa3.81□□□□□ -1.8
SCN11A-202ENST00000444237 Q6ZSV7 163 aa3.81□□□□□ -1.8
SCN11A-202ENST00000444237 ICE1Q9Y2F5 2266 aa3.81□□□□□ -1.8
SCN11A-202ENST00000444237 FSTL3O95633 263 aa3.81□□□□□ -1.8
SCN11A-202ENST00000444237 NACAE9PAV3 2078 aa3.81□□□□□ -1.8
SCN11A-202ENST00000444237 DEFB105AQ8NG35 78 aa3.8□□□□□ -1.8
SCN11A-202ENST00000444237 SMAD5-AS1Q9Y6J3 95 aa3.8□□□□□ -1.8
SCN11A-202ENST00000444237 RP1L1Q8IWN7 2480 aaPredicted RBP3.8□□□□□ -1.8
SCN11A-202ENST00000444237 CLPSL1A2RUU4 121 aa3.8□□□□□ -1.8
SCN11A-202ENST00000444237 A0A087WYN8 130 aa3.8□□□□□ -1.8
SCN11A-202ENST00000444237 H3BUX3 64 aa3.79□□□□□ -1.8
SCN11A-202ENST00000444237 RNASE3P12724 160 aaKnown RBP3.79□□□□□ -1.8
SCN11A-202ENST00000444237 C6orf99Q4VX62 202 aa3.79□□□□□ -1.8
SCN11A-202ENST00000444237 K7EMT4 169 aa3.79□□□□□ -1.8
SCN11A-202ENST00000444237 ESM1Q9NQ30 184 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms