RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 FAM231CP0DMU5 169 aa10.46□□□□□ -0.74
MCF2L-218ENST00000442625 MED14OSP0DP75 135 aa10.46□□□□□ -0.74
MCF2L-218ENST00000442625 APRG1Q8IVJ8 170 aa10.46□□□□□ -0.74
MCF2L-218ENST00000442625 NTN5Q8WTR8 489 aaPredicted RBP10.46□□□□□ -0.74
MCF2L-218ENST00000442625 USMG5Q96IX5 58 aa10.46□□□□□ -0.74
MCF2L-218ENST00000442625 SPANXCQ9NY87 97 aa10.46□□□□□ -0.74
MCF2L-218ENST00000442625 ITPR1Q14643 2758 aa10.46□□□□□ -0.74
MCF2L-218ENST00000442625 SBSPONQ8IVN8 264 aa10.45□□□□□ -0.74
MCF2L-218ENST00000442625 A8MZ25 164 aa10.45□□□□□ -0.74
MCF2L-218ENST00000442625 KLLNB2CW77 178 aa10.45□□□□□ -0.74
MCF2L-218ENST00000442625 PPP1R17O96001 155 aa10.45□□□□□ -0.74
MCF2L-218ENST00000442625 PF4P02776 101 aa10.45□□□□□ -0.74
MCF2L-218ENST00000442625 HTN1P15515 57 aa10.45□□□□□ -0.74
MCF2L-218ENST00000442625 LYRM7Q5U5X0 104 aa10.45□□□□□ -0.74
MCF2L-218ENST00000442625 C10orf99Q6UWK7 81 aa10.45□□□□□ -0.74
MCF2L-218ENST00000442625 TMEM263Q8WUH6 116 aaKnown RBP10.45□□□□□ -0.74
MCF2L-218ENST00000442625 TEX49A0A1B0GTD5 131 aa10.44□□□□□ -0.74
MCF2L-218ENST00000442625 NXPH4O95158 308 aa10.44□□□□□ -0.74
MCF2L-218ENST00000442625 PRM2P04554 102 aa10.44□□□□□ -0.74
MCF2L-218ENST00000442625 PAPPA-AS1Q5QFB9 102 aa10.44□□□□□ -0.74
MCF2L-218ENST00000442625 POM121L12Q8N7R1 296 aa10.44□□□□□ -0.74
MCF2L-218ENST00000442625 TMEM141Q96I45 108 aa10.44□□□□□ -0.74
MCF2L-218ENST00000442625 TIMM17AQ99595 171 aa10.44□□□□□ -0.74
MCF2L-218ENST00000442625 PRRC2AP48634 2157 aaKnown RBP10.44□□□□□ -0.74
MCF2L-218ENST00000442625 NDUFA7O95182 113 aa10.44□□□□□ -0.74
MCF2L-218ENST00000442625 TMEM86BQ8N661 226 aa10.44□□□□□ -0.74
MCF2L-218ENST00000442625 TRAV8-3A0A0A6YYJ7 113 aa10.43□□□□□ -0.74
MCF2L-218ENST00000442625 TRAV4A0A0B4J268 109 aa10.43□□□□□ -0.74
MCF2L-218ENST00000442625 TMEM223A0PJW6 202 aa10.43□□□□□ -0.74
MCF2L-218ENST00000442625 ZNF22P17026 224 aaPredicted RBP10.43□□□□□ -0.74
MCF2L-218ENST00000442625 HERVK_113P63121 156 aa10.43□□□□□ -0.74
MCF2L-218ENST00000442625 TRBV27A0A0K0K1C4 114 aa10.43□□□□□ -0.74
MCF2L-218ENST00000442625 PRSS2P07478 247 aa10.43□□□□□ -0.74
MCF2L-218ENST00000442625 Q8N1Y9 231 aa10.43□□□□□ -0.74
MCF2L-218ENST00000442625 DCANP1Q8TF63 244 aa10.43□□□□□ -0.74
MCF2L-218ENST00000442625 Q9UF83 564 aa10.43□□□□□ -0.74
MCF2L-218ENST00000442625 A6NDX4 124 aa10.42□□□□□ -0.74
MCF2L-218ENST00000442625 M0QY20 66 aa10.42□□□□□ -0.74
MCF2L-218ENST00000442625 PROK1P58294 105 aa10.42□□□□□ -0.74
MCF2L-218ENST00000442625 ZANQ9Y493 2812 aa10.42□□□□□ -0.74
MCF2L-218ENST00000442625 UTP20O75691 2785 aaKnown RBP10.42□□□□□ -0.74
MCF2L-218ENST00000442625 NACAE9PAV3 2078 aa10.42□□□□□ -0.74
MCF2L-218ENST00000442625 GNLYP22749 145 aa10.42□□□□□ -0.74
MCF2L-218ENST00000442625 SPINK13Q1W4C9 94 aa10.42□□□□□ -0.74
MCF2L-218ENST00000442625 IGHV3-16A0A0C4DH30 117 aa10.41□□□□□ -0.74
MCF2L-218ENST00000442625 LEPROTO15243 131 aa10.41□□□□□ -0.74
MCF2L-218ENST00000442625 IGLV1-40P01703 118 aa10.41□□□□□ -0.74
MCF2L-218ENST00000442625 IGHV4-30-2A0A087WSY4 118 aa10.4□□□□□ -0.74
MCF2L-218ENST00000442625 LGALS9O00182 355 aa10.4□□□□□ -0.74
MCF2L-218ENST00000442625 TRIAP1O43715 76 aa10.4□□□□□ -0.74
MCF2L-218ENST00000442625 AVPP01185 164 aa10.4□□□□□ -0.74
MCF2L-218ENST00000442625 H3BUA1 57 aa10.4□□□□□ -0.75
MCF2L-218ENST00000442625 ADAMTSL4-AS1Q5T5F5 129 aa10.4□□□□□ -0.75
MCF2L-218ENST00000442625 C9orf153Q5TBE3 101 aa10.4□□□□□ -0.75
MCF2L-218ENST00000442625 C1orf195Q5TG92 126 aa10.4□□□□□ -0.75
MCF2L-218ENST00000442625 IGLV4-3A0A075B6K6 122 aa10.39□□□□□ -0.75
MCF2L-218ENST00000442625 A0A0J9YXY3 114 aa10.39□□□□□ -0.75
MCF2L-218ENST00000442625 C4orf48Q5BLP8 95 aa10.39□□□□□ -0.75
MCF2L-218ENST00000442625 LINC01620Q4KN68 170 aa10.39□□□□□ -0.75
MCF2L-218ENST00000442625 KNCNA6PVL3 124 aa10.38□□□□□ -0.75
MCF2L-218ENST00000442625 IGHV3-30-3P0DP02 117 aa10.38□□□□□ -0.75
MCF2L-218ENST00000442625 DAND5Q8N907 189 aa10.38□□□□□ -0.75
MCF2L-218ENST00000442625 C20orf203Q8NBC4 194 aa10.38□□□□□ -0.75
MCF2L-218ENST00000442625 CCL19Q99731 98 aa10.38□□□□□ -0.75
MCF2L-218ENST00000442625 C10orf105Q8TEF2 133 aa10.38□□□□□ -0.75
MCF2L-218ENST00000442625 CLEC2BQ92478 149 aa10.38□□□□□ -0.75
MCF2L-218ENST00000442625 FAM236AA0A1B0GUQ0 79 aa10.37□□□□□ -0.75
MCF2L-218ENST00000442625 FAM236BA0A1B0GV22 79 aa10.37□□□□□ -0.75
MCF2L-218ENST00000442625 Q5XG85 94 aa10.37□□□□□ -0.75
MCF2L-218ENST00000442625 IL17DQ8TAD2 202 aa10.37□□□□□ -0.75
MCF2L-218ENST00000442625 C9orf85Q96MD7 179 aa10.37□□□□□ -0.75
MCF2L-218ENST00000442625 PRORYQ9H606 182 aa10.37□□□□□ -0.75
MCF2L-218ENST00000442625 TRBV6-5A0A0K0K1A5 114 aa10.36□□□□□ -0.75
MCF2L-218ENST00000442625 CFHR3Q02985 330 aa10.36□□□□□ -0.75
MCF2L-218ENST00000442625 FAM104AQ969W3 186 aa10.36□□□□□ -0.75
MCF2L-218ENST00000442625 FAM236DA0A1B0GTK5 79 aa10.36□□□□□ -0.75
MCF2L-218ENST00000442625 M0R2P5 195 aa10.36□□□□□ -0.75
MCF2L-218ENST00000442625 FAM236CP0DP71 79 aa10.36□□□□□ -0.75
MCF2L-218ENST00000442625 NOTCH3Q9UM47 2321 aa10.36□□□□□ -0.75
MCF2L-218ENST00000442625 A0A0B4J2C4 111 aa10.35□□□□□ -0.75
MCF2L-218ENST00000442625 A0A0J9YX75 114 aa10.35□□□□□ -0.75
MCF2L-218ENST00000442625 IGHV4-59P01825 116 aa10.35□□□□□ -0.75
MCF2L-218ENST00000442625 CD28P10747 220 aa10.35□□□□□ -0.75
MCF2L-218ENST00000442625 NSUN5P1Q3KNT7 163 aa10.35□□□□□ -0.75
MCF2L-218ENST00000442625 LINC00336Q6ZUF6 198 aa10.35□□□□□ -0.75
MCF2L-218ENST00000442625 RETNQ9HD89 108 aa10.35□□□□□ -0.75
MCF2L-218ENST00000442625 MSMBP08118 114 aa10.35□□□□□ -0.75
MCF2L-218ENST00000442625 ATXN8Q156A1 80 aa10.35□□□□□ -0.75
MCF2L-218ENST00000442625 ODF3Q96PU9 254 aa10.35□□□□□ -0.75
MCF2L-218ENST00000442625 LITAFQ99732 161 aa10.35□□□□□ -0.75
MCF2L-218ENST00000442625 SYNJ2BPP57105 145 aa10.35□□□□□ -0.75
MCF2L-218ENST00000442625 TIMM21Q9BVV7 248 aa10.35□□□□□ -0.75
MCF2L-218ENST00000442625 USP9YO00507 2555 aaPredicted RBP10.34□□□□□ -0.75
MCF2L-218ENST00000442625 C2CD3Q4AC94 2353 aa10.34□□□□□ -0.75
MCF2L-218ENST00000442625 I3L3M4 83 aa10.34□□□□□ -0.75
MCF2L-218ENST00000442625 K7EMT4 169 aa10.34□□□□□ -0.75
MCF2L-218ENST00000442625 CENPEQ02224 2701 aa10.34□□□□□ -0.75
MCF2L-218ENST00000442625 IGHV1OR15-1A0A075B7D0 117 aa10.34□□□□□ -0.75
MCF2L-218ENST00000442625 PSMB8P28062 276 aa10.34□□□□□ -0.75
MCF2L-218ENST00000442625 SNRPD3P62318 126 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms