RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 BCL9LQ86UU0 1499 aa-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 USP9YO00507 2555 aaPredicted RBP-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 SPTBN4Q9H254 2564 aa-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 PTPN13Q12923 2485 aa-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 IGLV5-48A0A075B6I7 105 aa-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 TRAV2A0A0B4J234 112 aa-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 TRAV12-3A0A0B4J271 114 aa-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 TRBV7-4A0A0J9YYF1 115 aa-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 TRBV10-3A0A0K0K1G6 114 aa-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 A0A1B0GW64 132 aa-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 C7orf77A4D0Y5 90 aa-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 LINC01546A6NGU7 62 aa-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 CHKB-CPT1BH3BT56 60 aa-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 M0R135 149 aa-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 SMIM24O75264 130 aa-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 PITX3O75364 302 aa-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 S100A8P05109 93 aa-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 MT1HL1P0DM35 61 aa-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 MT1GP13640 62 aa-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 HIST1H1DP16402 221 aaKnown RBP-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 CCL3L1P16619 93 aa-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 NPC2P61916 151 aa-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 RPL38P63173 70 aaKnown RBP-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 SPCS2Q15005 226 aa-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 C10orf128Q5T292 105 aa-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 TMEM244Q5VVB8 128 aa-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 SFTA2Q6UW10 78 aa-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 TAC4Q86UU9 113 aa-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 BAGE3Q86Y29 109 aa-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 NDUFA11Q86Y39 141 aa-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 KRTAP8-1Q8IUC2 63 aa-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 FAM223AQ8IWN6 122 aa-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 TTC9CQ8N5M4 171 aa-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 COX7B2Q8TF08 81 aa-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 SPRR4Q96PI1 79 aa-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 PSMG3Q9BT73 122 aaPredicted RBP-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 CDC42SE2Q9NRR3 84 aa-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 RPRMQ9NS64 109 aa-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 CDKN2A-AS1Q9UH64 79 aa-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 GINS2Q9Y248 185 aa-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 HSPB11Q9Y547 144 aa-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 R4GMQ9 66 aa-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 HECTD1Q9ULT8 2610 aa-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 LRP6O75581 1613 aa-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 ARHGEF12Q9NZN5 1544 aa-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 PLXNA1Q9UIW2 1896 aa-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 ZNF609O15014 1411 aa-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 TROQ12816 1431 aaPredicted RBP-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 COL14A1Q05707 1796 aaKnown RBP-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 CNOT1A5YKK6 2376 aaKnown RBP-0.14□□□□□ -2.43
PFDN4-202ENST00000441080 TNRC18O15417 2968 aaPredicted RBP-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 ARHGEF5Q12774 1597 aa-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 CDC42BPGQ6DT37 1551 aa-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 XIRP1Q702N8 1843 aaKnown RBP-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 PXDNQ92626 1479 aa-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 VWFP04275 2813 aa-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 MXRA5Q9NR99 2828 aa-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 LAMA5O15230 3695 aa-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 TRBV20-1A0A075B6N2 111 aa-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 TRAV36DV7A0A075B6V5 113 aa-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 A0A1B0GU69 56 aa-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 LINC00959A0A1B0GUT2 108 aa-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 A0A1B0GWA3 101 aa-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 M0R129 80 aa-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 M0R2P5 195 aa-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 PIN1P1O15428 100 aa-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 IFNA17P01571 189 aa-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 RBP4P02753 201 aa-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 SFTA3P0C7M3 94 aa-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 TRAPPC2P0DI81 140 aa-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 TRAPPC2BP0DI82 140 aa-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 PIPP12273 146 aaPredicted RBP-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 UBE2D1P51668 147 aa-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 RPS29P62273 56 aaKnown RBP-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 COX17Q14061 63 aa-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 INSL4Q14641 139 aa-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 OR8B8Q15620 311 aa-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 Q56UQ5 140 aa-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 C9orf116Q5BN46 136 aaPredicted RBP-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 ATP11AUNQ6ZP68 121 aa-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 MAGOHBQ96A72 148 aaKnown RBP-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 IFI27L1Q96BM0 104 aa-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 TRGV9Q99603 122 aa-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 VAMP8Q9BV40 100 aa-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 SNRNP25Q9BV90 132 aaKnown RBP-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 FAM107BQ9H098 131 aa-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 TMEM191AQ9H0A3 160 aa-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 PRO1933Q9H354 126 aa-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 PRO3102Q9H379 93 aa-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 BANF2Q9H503 90 aa-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 LINC00472Q9H8W2 130 aa-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 NDUFA4L2Q9NRX3 87 aa-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 ABRACLQ9P1F3 81 aa-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 NOP16Q9Y3C1 178 aaKnown RBP-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 AP4S1Q9Y587 144 aa-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 SERP1Q9Y6X1 66 aa-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 CDK13Q14004 1512 aaKnown RBP-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 HSPG2P98160 4391 aa-0.15□□□□□ -2.43
PFDN4-202ENST00000441080 CELSR1Q9NYQ6 3014 aa-0.15□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 161.5 ms