RNA–Protein interactions for RNA: ENST00000439961.2

SUMO1P3-201, Transcript of SUMO1 pseudogene 3, humanhuman

BASIC

Gene SUMO1P3, Length 304 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1P3-201ENST00000439961 NIPBLQ6KC79 2804 aaeCLIP-0.81□□□□□ -2.54
SUMO1P3-201ENST00000439961 POLA1P09884 1462 aaPredicted RBP-0.81□□□□□ -2.54
SUMO1P3-201ENST00000439961 PXDNQ92626 1479 aa-0.81□□□□□ -2.54
SUMO1P3-201ENST00000439961 DNAH2Q9P225 4427 aa-0.81□□□□□ -2.54
SUMO1P3-201ENST00000439961 MYOM3Q5VTT5 1437 aa-0.81□□□□□ -2.54
SUMO1P3-201ENST00000439961 ATG2AQ2TAZ0 1938 aa-0.81□□□□□ -2.54
SUMO1P3-201ENST00000439961 DNAH3Q8TD57 4116 aa-0.82□□□□□ -2.54
SUMO1P3-201ENST00000439961 DOCK5Q9H7D0 1870 aa-0.82□□□□□ -2.54
SUMO1P3-201ENST00000439961 KIF1BO60333 1816 aa-0.82□□□□□ -2.54
SUMO1P3-201ENST00000439961 C9orf92A6NGG3 77 aa-0.82□□□□□ -2.54
SUMO1P3-201ENST00000439961 CPSF4LA6NMK7 179 aaKnown RBP-0.82□□□□□ -2.54
SUMO1P3-201ENST00000439961 UQCR11O14957 56 aa-0.82□□□□□ -2.54
SUMO1P3-201ENST00000439961 APOC3P02656 99 aa-0.82□□□□□ -2.54
SUMO1P3-201ENST00000439961 CBLN1P23435 193 aa-0.82□□□□□ -2.54
SUMO1P3-201ENST00000439961 POLR2HP52434 150 aaKnown RBP-0.82□□□□□ -2.54
SUMO1P3-201ENST00000439961 CCL8P80075 99 aa-0.82□□□□□ -2.54
SUMO1P3-201ENST00000439961 VSTM2AQ8TAG5 236 aa-0.82□□□□□ -2.54
SUMO1P3-201ENST00000439961 CFAP53Q96M91 514 aa-0.82□□□□□ -2.54
SUMO1P3-201ENST00000439961 CCDC115Q96NT0 180 aa-0.82□□□□□ -2.54
SUMO1P3-201ENST00000439961 NAA60Q9H7X0 242 aa-0.82□□□□□ -2.54
SUMO1P3-201ENST00000439961 PARVGQ9HBI0 331 aa-0.82□□□□□ -2.54
SUMO1P3-201ENST00000439961 MRPL40Q9NQ50 206 aaKnown RBP-0.82□□□□□ -2.54
SUMO1P3-201ENST00000439961 CALML5Q9NZT1 146 aa-0.82□□□□□ -2.54
SUMO1P3-201ENST00000439961 ATPIF1Q9UII2 106 aa-0.82□□□□□ -2.54
SUMO1P3-201ENST00000439961 APLNQ9ULZ1 77 aa-0.82□□□□□ -2.54
SUMO1P3-201ENST00000439961 LINC00312Q9Y6C7 94 aa-0.82□□□□□ -2.54
SUMO1P3-201ENST00000439961 HELZP42694 1942 aaKnown RBP-0.82□□□□□ -2.54
SUMO1P3-201ENST00000439961 MYO5AQ9Y4I1 1855 aaKnown RBP-0.82□□□□□ -2.54
SUMO1P3-201ENST00000439961 LRRK2Q5S007 2527 aa-0.82□□□□□ -2.54
SUMO1P3-201ENST00000439961 PAPPAQ13219 1627 aa-0.82□□□□□ -2.54
SUMO1P3-201ENST00000439961 PKD1P98161 4303 aa-0.83□□□□□ -2.54
SUMO1P3-201ENST00000439961 ADGRB1O14514 1584 aa-0.83□□□□□ -2.54
SUMO1P3-201ENST00000439961 PCF11O94913 1555 aaKnown RBP-0.83□□□□□ -2.54
SUMO1P3-201ENST00000439961 VPS13DQ5THJ4 4388 aa-0.83□□□□□ -2.54
SUMO1P3-201ENST00000439961 DOCK11Q5JSL3 2073 aa-0.83□□□□□ -2.54
SUMO1P3-201ENST00000439961 TRBV20-1A0A075B6N2 111 aa-0.83□□□□□ -2.54
SUMO1P3-201ENST00000439961 PIGBOS1A0A0B4J2F0 54 aa-0.83□□□□□ -2.54
SUMO1P3-201ENST00000439961 F8VRH5 84 aa-0.83□□□□□ -2.54
SUMO1P3-201ENST00000439961 H3BNG1 76 aa-0.83□□□□□ -2.54
SUMO1P3-201ENST00000439961 ARPC5O15511 151 aa-0.83□□□□□ -2.54
SUMO1P3-201ENST00000439961 DPM2O94777 84 aa-0.83□□□□□ -2.54
SUMO1P3-201ENST00000439961 RPL7P18124 248 aaKnown RBP-0.83□□□□□ -2.54
SUMO1P3-201ENST00000439961 SERPINB1P30740 379 aa-0.83□□□□□ -2.54
SUMO1P3-201ENST00000439961 H1FX-AS1Q4G0G2 97 aa-0.83□□□□□ -2.54
SUMO1P3-201ENST00000439961 TMEM78Q5T7P6 136 aa-0.83□□□□□ -2.54
SUMO1P3-201ENST00000439961 HRCT1Q6UXD1 115 aa-0.83□□□□□ -2.54
SUMO1P3-201ENST00000439961 STX12Q86Y82 276 aa-0.83□□□□□ -2.54
SUMO1P3-201ENST00000439961 CTAGE3PQ8IX95 158 aa-0.83□□□□□ -2.54
SUMO1P3-201ENST00000439961 SMIM20Q8N5G0 67 aa-0.83□□□□□ -2.54
SUMO1P3-201ENST00000439961 C10orf82Q8WW14 230 aa-0.83□□□□□ -2.54
SUMO1P3-201ENST00000439961 AMELXQ99217 191 aa-0.83□□□□□ -2.54
SUMO1P3-201ENST00000439961 LENEPQ9Y5L5 61 aa-0.83□□□□□ -2.54
SUMO1P3-201ENST00000439961 V9GYH0 126 aa-0.83□□□□□ -2.54
SUMO1P3-201ENST00000439961 LRRC37A3O60309 1634 aa-0.83□□□□□ -2.54
SUMO1P3-201ENST00000439961 SETBP1Q9Y6X0 1596 aa-0.83□□□□□ -2.54
SUMO1P3-201ENST00000439961 RNF213Q63HN8 5207 aa-0.83□□□□□ -2.54
SUMO1P3-201ENST00000439961 LRRC37A2A6NM11 1700 aa-0.84□□□□□ -2.54
SUMO1P3-201ENST00000439961 TRPM7Q96QT4 1865 aa-0.84□□□□□ -2.54
SUMO1P3-201ENST00000439961 ZNF142P52746 1687 aaPredicted RBP-0.84□□□□□ -2.54
SUMO1P3-201ENST00000439961 CCDC141Q6ZP82 1450 aa-0.84□□□□□ -2.54
SUMO1P3-201ENST00000439961 SPAARA0A1B0GVQ0 90 aa-0.84□□□□□ -2.54
SUMO1P3-201ENST00000439961 A0A1W2PRE2 83 aa-0.84□□□□□ -2.54
SUMO1P3-201ENST00000439961 SIX6O95475 246 aa-0.84□□□□□ -2.54
SUMO1P3-201ENST00000439961 RPS28P62857 69 aaKnown RBP-0.84□□□□□ -2.54
SUMO1P3-201ENST00000439961 ALX1Q15699 326 aa-0.84□□□□□ -2.54
SUMO1P3-201ENST00000439961 CLLU1Q5K131 121 aa-0.84□□□□□ -2.54
SUMO1P3-201ENST00000439961 Q6AWC8 147 aa-0.84□□□□□ -2.54
SUMO1P3-201ENST00000439961 TOMM20LQ6UXN7 152 aa-0.84□□□□□ -2.54
SUMO1P3-201ENST00000439961 BAGE2Q86Y30 109 aa-0.84□□□□□ -2.54
SUMO1P3-201ENST00000439961 TMEM263Q8WUH6 116 aaKnown RBP-0.84□□□□□ -2.54
SUMO1P3-201ENST00000439961 AQP10Q96PS8 301 aa-0.84□□□□□ -2.54
SUMO1P3-201ENST00000439961 SPANXCQ9NY87 97 aa-0.84□□□□□ -2.54
SUMO1P3-201ENST00000439961 TRAPPC2LQ9UL33 140 aa-0.84□□□□□ -2.54
SUMO1P3-201ENST00000439961 TROQ12816 1431 aaPredicted RBP-0.84□□□□□ -2.54
SUMO1P3-201ENST00000439961 EIF3AQ14152 1382 aaKnown RBP-0.84□□□□□ -2.54
SUMO1P3-201ENST00000439961 FAT3Q8TDW7 4589 aa-0.84□□□□□ -2.54
SUMO1P3-201ENST00000439961 TULP4Q9NRJ4 1543 aa-0.84□□□□□ -2.54
SUMO1P3-201ENST00000439961 PLECQ15149 4684 aaKnown RBP-0.85□□□□□ -2.54
SUMO1P3-201ENST00000439961 NBASA2RRP1 2371 aa-0.85□□□□□ -2.55
SUMO1P3-201ENST00000439961 K7EP34 96 aa-0.85□□□□□ -2.55
SUMO1P3-201ENST00000439961 PITX3O75364 302 aa-0.85□□□□□ -2.55
SUMO1P3-201ENST00000439961 PAEPP09466 180 aa-0.85□□□□□ -2.55
SUMO1P3-201ENST00000439961 SCTP09683 121 aa-0.85□□□□□ -2.55
SUMO1P3-201ENST00000439961 ANK1P16157 1881 aa-0.85□□□□□ -2.55
SUMO1P3-201ENST00000439961 NCS1P62166 190 aa-0.85□□□□□ -2.55
SUMO1P3-201ENST00000439961 UBE2G1P62253 170 aa-0.85□□□□□ -2.55
SUMO1P3-201ENST00000439961 BTG2P78543 158 aa-0.85□□□□□ -2.55
SUMO1P3-201ENST00000439961 OR8I2Q8N0Y5 310 aa-0.85□□□□□ -2.55
SUMO1P3-201ENST00000439961 TMEM35BQ8NCS4 154 aa-0.85□□□□□ -2.55
SUMO1P3-201ENST00000439961 SPTSSBQ8NFR3 76 aa-0.85□□□□□ -2.55
SUMO1P3-201ENST00000439961 BANF2Q9H503 90 aa-0.85□□□□□ -2.55
SUMO1P3-201ENST00000439961 MYO7BQ6PIF6 2116 aa-0.85□□□□□ -2.55
SUMO1P3-201ENST00000439961 ADGBQ8N7X0 1667 aa-0.85□□□□□ -2.55
SUMO1P3-201ENST00000439961 ROCK1Q13464 1354 aa-0.85□□□□□ -2.55
SUMO1P3-201ENST00000439961 LAMA3Q16787 3333 aa-0.86□□□□□ -2.55
SUMO1P3-201ENST00000439961 CCDC168Q8NDH2 2452 aa-0.86□□□□□ -2.55
SUMO1P3-201ENST00000439961 PTPN23Q9H3S7 1636 aa-0.86□□□□□ -2.55
SUMO1P3-201ENST00000439961 MTORP42345 2549 aa-0.86□□□□□ -2.55
SUMO1P3-201ENST00000439961 OVOS2A0A0G2JMS6 1433 aa-0.86□□□□□ -2.55
SUMO1P3-201ENST00000439961 TRBV7-3A0A075B6L6 115 aa-0.86□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms